FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5054, 531 aa 1>>>pF1KB5054 531 - 531 aa - 531 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8329+/-0.0005; mu= 15.2890+/- 0.031 mean_var=69.9675+/-14.087, 0's: 0 Z-trim(107.5): 69 B-trim: 240 in 2/49 Lambda= 0.153330 statistics sampled from 15529 (15586) to 15529 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.528), E-opt: 0.2 (0.183), width: 16 Scan time: 7.970 The best scores are: opt bits E(85289) NP_001753 (OMIM: 104613) T-complex protein 1 subun ( 531) 3355 752.1 9.7e-217 NP_006575 (OMIM: 610730) T-complex protein 1 subun ( 530) 2952 662.9 6.6e-190 NP_001009186 (OMIM: 104613) T-complex protein 1 su ( 486) 2682 603.2 5.9e-172 XP_016879512 (OMIM: 610730) PREDICTED: T-complex p ( 464) 2592 583.3 5.5e-166 NP_001180459 (OMIM: 610730) T-complex protein 1 su ( 485) 2325 524.2 3.5e-148 XP_011522505 (OMIM: 610730) PREDICTED: T-complex p ( 388) 2162 488.1 2e-137 NP_001180458 (OMIM: 610730) T-complex protein 1 su ( 493) 1654 375.8 1.7e-103 XP_016879513 (OMIM: 610730) PREDICTED: T-complex p ( 351) 1649 374.6 2.7e-103 NP_005989 (OMIM: 600114) T-complex protein 1 subun ( 545) 917 212.8 2.2e-54 NP_036205 (OMIM: 256840,610150) T-complex protein ( 541) 859 199.9 1.6e-50 NP_001293082 (OMIM: 256840,610150) T-complex prote ( 520) 852 198.4 4.5e-50 NP_001293085 (OMIM: 256840,610150) T-complex prote ( 503) 848 197.5 8.1e-50 NP_006421 (OMIM: 605142) T-complex protein 1 subun ( 539) 804 187.8 7.3e-47 NP_001008800 (OMIM: 600114) T-complex protein 1 su ( 507) 775 181.3 5.9e-45 NP_110379 (OMIM: 186980) T-complex protein 1 subun ( 556) 754 176.7 1.6e-43 NP_006420 (OMIM: 605140) T-complex protein 1 subun ( 543) 711 167.2 1.1e-40 NP_001159757 (OMIM: 605140) T-complex protein 1 su ( 499) 645 152.6 2.6e-36 XP_011530781 (OMIM: 605140) PREDICTED: T-complex p ( 499) 645 152.6 2.6e-36 XP_011530780 (OMIM: 605140) PREDICTED: T-complex p ( 499) 645 152.6 2.6e-36 NP_001293083 (OMIM: 256840,610150) T-complex prote ( 486) 641 151.7 4.8e-36 NP_001293084 (OMIM: 256840,610150) T-complex prote ( 448) 636 150.6 9.5e-36 NP_006422 (OMIM: 605139) T-complex protein 1 subun ( 535) 621 147.3 1.1e-34 NP_001243650 (OMIM: 605142) T-complex protein 1 su ( 509) 610 144.8 5.8e-34 NP_001159756 (OMIM: 605140) T-complex protein 1 su ( 456) 550 131.6 5.2e-30 NP_001185771 (OMIM: 605139) T-complex protein 1 su ( 488) 549 131.3 6.4e-30 NP_001008897 (OMIM: 186980) T-complex protein 1 su ( 401) 480 116.0 2.1e-25 NP_001009570 (OMIM: 605140) T-complex protein 1 su ( 339) 412 101.0 6.1e-21 NP_061336 (OMIM: 209900,236700,604896,605231) McKu ( 570) 156 44.4 0.0011 NP_740754 (OMIM: 209900,236700,604896,605231) McKu ( 570) 156 44.4 0.0011 NP_002147 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 153 43.8 0.0017 NP_955472 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 153 43.8 0.0017 NP_078961 (OMIM: 610148,615987) Bardet-Biedl syndr ( 723) 153 43.8 0.0021 >>NP_001753 (OMIM: 104613) T-complex protein 1 subunit z (531 aa) initn: 3355 init1: 3355 opt: 3355 Z-score: 4012.1 bits: 752.1 E(85289): 9.7e-217 Smith-Waterman score: 3355; 99.8% identity (99.8% similar) in 531 aa overlap (1-531:1-531) 10 20 30 40 50 60 pF1KB5 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILTCNVSLEYE :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: NP_001 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 430 440 450 460 470 480 490 500 510 520 530 pF1KB5 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG 490 500 510 520 530 >>NP_006575 (OMIM: 610730) T-complex protein 1 subunit z (530 aa) initn: 2952 init1: 2952 opt: 2952 Z-score: 3530.4 bits: 662.9 E(85289): 6.6e-190 Smith-Waterman score: 2952; 85.8% identity (95.7% similar) in 530 aa overlap (1-530:1-530) 10 20 30 40 50 60 pF1KB5 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG :::.:..: :::::::.::::::: ::::::::::::::::::::::::::::::::::: NP_006 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT :::: :::::::::::::::::::::.::::::::::::::::::::::::::::::::. NP_006 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK ::::::: :::. ::::::..:: :. :.:::::::.:::::::::::::.::::.::.. NP_006 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILTCNVSLEYE . ::::::.:::::::: :::.::.:::::::::::::::::::: :: :::::::: NP_006 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF :::::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::::::::::: NP_006 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF :::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::::::::::: NP_006 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE ::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::::.:::::: NP_006 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD ::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: :: :::::: NP_006 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 430 440 450 460 470 480 490 500 510 520 530 pF1KB5 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG ::::::::::..:::::::::::::::::::::::::::::::::::::: NP_006 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 490 500 510 520 530 >>NP_001009186 (OMIM: 104613) T-complex protein 1 subuni (486 aa) initn: 2671 init1: 2671 opt: 2682 Z-score: 3208.2 bits: 603.2 E(85289): 5.9e-172 Smith-Waterman score: 2982; 91.3% identity (91.3% similar) in 531 aa overlap (1-531:1-486) 10 20 30 40 50 60 pF1KB5 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT ::::::: :::::::: NP_001 NVLLHEM---------------------------------------------GLHPRIIT 70 130 140 150 160 170 180 pF1KB5 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 80 90 100 110 120 130 190 200 210 220 230 240 pF1KB5 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILTCNVSLEYE :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: NP_001 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 140 150 160 170 180 190 250 260 270 280 290 300 pF1KB5 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 200 210 220 230 240 250 310 320 330 340 350 360 pF1KB5 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 260 270 280 290 300 310 370 380 390 400 410 420 pF1KB5 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 320 330 340 350 360 370 430 440 450 460 470 480 pF1KB5 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 380 390 400 410 420 430 490 500 510 520 530 pF1KB5 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG 440 450 460 470 480 >>XP_016879512 (OMIM: 610730) PREDICTED: T-complex prote (464 aa) initn: 2592 init1: 2592 opt: 2592 Z-score: 3100.9 bits: 583.3 E(85289): 5.5e-166 Smith-Waterman score: 2592; 85.3% identity (95.7% similar) in 464 aa overlap (67-530:1-464) 40 50 60 70 80 90 pF1KB5 NLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNV ::::::::::::::::::::.::::::::: XP_016 MQIQHPTASLIAKVATAQDDVTGDGTTSNV 10 20 30 100 110 120 130 140 150 pF1KB5 LIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSL :::::::::::::::::::::::.::::::: :::. ::::::..:: :. :.::::::: XP_016 LIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KB5 RTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGA .:::::::::::::.::::.::... ::::::.:::::::: :::.::.:::::::: XP_016 QTKVHAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KB5 RHPDMKKRVEDACILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIE :::::::::::: :: :::::::::::::::::::.:::.:::::::::::::::.:::. XP_016 RHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIID 160 170 180 190 200 210 280 290 300 310 320 330 pF1KB5 LKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSF :: :::..:.:::::::::::::::::.:.:.::::::::::::::::.:::::.:.::: XP_016 LKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSF 220 230 240 250 260 270 340 350 360 370 380 390 pF1KB5 DDLSPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLR .::. :::::::::::::::::::::::.: :: :::::.::::::::::.:::.::::: XP_016 EDLTVDCLGHAGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLR 280 290 300 310 320 330 400 410 420 430 440 450 pF1KB5 AVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSG :.::::.:::.::::::.::::::::. .: :.::::.::::::::::::::::::::.: XP_016 AIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAG 340 350 360 370 380 390 460 470 480 490 500 510 pF1KB5 FDLQETLVKIQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNIL .: ::::::.:::: :: ::::::::::::::::..:::::::::::::::::::::::: XP_016 YDPQETLVKVQAEHVESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNIL 400 410 420 430 440 450 520 530 pF1KB5 LVDEIMRAGMSSLKG :::::::::::::: XP_016 LVDEIMRAGMSSLK 460 >>NP_001180459 (OMIM: 610730) T-complex protein 1 subuni (485 aa) initn: 2313 init1: 2313 opt: 2325 Z-score: 2781.4 bits: 524.2 E(85289): 3.5e-148 Smith-Waterman score: 2580; 77.5% identity (87.2% similar) in 530 aa overlap (1-530:1-485) 10 20 30 40 50 60 pF1KB5 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG :::.:..: :::::::.::::::: ::::::::::::::::::::::::::::::::::: NP_001 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT :::: :: :::::::. NP_001 NVLLDEM---------------------------------------------GLHPRIIA 70 130 140 150 160 170 180 pF1KB5 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK ::::::: :::. ::::::..:: :. :.:::::::.:::::::::::::.::::.::.. NP_001 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 80 90 100 110 120 130 190 200 210 220 230 240 pF1KB5 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILTCNVSLEYE . ::::::.:::::::: :::.::.:::::::::::::::::::: :: :::::::: NP_001 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE 140 150 160 170 180 190 250 260 270 280 290 300 pF1KB5 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF :::::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::::::::::: NP_001 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 200 210 220 230 240 250 310 320 330 340 350 360 pF1KB5 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF :::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::::::::::: NP_001 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 260 270 280 290 300 310 370 380 390 400 410 420 pF1KB5 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE ::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::::.:::::: NP_001 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 320 330 340 350 360 370 430 440 450 460 470 480 pF1KB5 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD ::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: :: :::::: NP_001 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 380 390 400 410 420 430 490 500 510 520 530 pF1KB5 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG ::::::::::..:::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 440 450 460 470 480 >>XP_011522505 (OMIM: 610730) PREDICTED: T-complex prote (388 aa) initn: 2162 init1: 2162 opt: 2162 Z-score: 2588.1 bits: 488.1 E(85289): 2e-137 Smith-Waterman score: 2162; 84.3% identity (95.4% similar) in 388 aa overlap (143-530:1-388) 120 130 140 150 160 170 pF1KB5 GLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAV : :. :.:::::::.:::::::::::::.: XP_011 MKRKILLDVARTSLQTKVHAELADVLTEVV 10 20 30 180 190 200 210 220 230 pF1KB5 VDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILT :::.::... ::::::.:::::::: :::.::.:::::::::::::::::::: :: XP_011 VDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILI 40 50 60 70 80 90 240 250 260 270 280 290 pF1KB5 CNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVI :::::::::::::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::: XP_011 CNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVI 100 110 120 130 140 150 300 310 320 330 340 350 pF1KB5 NQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYE :::::::::::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::: XP_011 NQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYE 160 170 180 190 200 210 360 370 380 390 400 410 pF1KB5 YTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAG ::::::::::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::: XP_011 YTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAG 220 230 240 250 260 270 420 430 440 450 460 470 pF1KB5 AVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSE :.::::::::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: : XP_011 AIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVE 280 290 300 310 320 330 480 490 500 510 520 530 pF1KB5 SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG : ::::::::::::::::..:::::::::::::::::::::::::::::::::::::: XP_011 SKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 340 350 360 370 380 >>NP_001180458 (OMIM: 610730) T-complex protein 1 subuni (493 aa) initn: 1683 init1: 1647 opt: 1654 Z-score: 1979.1 bits: 375.8 E(85289): 1.7e-103 Smith-Waterman score: 2645; 79.4% identity (89.1% similar) in 530 aa overlap (1-530:1-493) 10 20 30 40 50 60 pF1KB5 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG :::.:..: :::::::.::::::: ::::::::::::::::::::::::::::::::::: NP_001 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT :::: :::::::::::::::::::::.::::::::::::::::::::::::::::::::. NP_001 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK ::::::: :::. ::::::..:: :. :.:::::::.:::::::::::::.::::.::.. NP_001 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILTCNVSLEYE . ::::::.:::::::: :::. NP_001 RPGYPIDLFMVEIMEMKHKLGTDTK----------------------------------- 190 200 250 260 270 280 290 300 pF1KB5 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF :::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::::::::::: NP_001 --EVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 210 220 230 240 250 260 310 320 330 340 350 360 pF1KB5 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF :::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::::::::::: NP_001 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 270 280 290 300 310 320 370 380 390 400 410 420 pF1KB5 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE ::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::::.:::::: NP_001 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 330 340 350 360 370 380 430 440 450 460 470 480 pF1KB5 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD ::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: :: :::::: NP_001 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 390 400 410 420 430 440 490 500 510 520 530 pF1KB5 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG ::::::::::..:::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 450 460 470 480 490 >>XP_016879513 (OMIM: 610730) PREDICTED: T-complex prote (351 aa) initn: 1647 init1: 1647 opt: 1649 Z-score: 1975.5 bits: 374.6 E(85289): 2.7e-103 Smith-Waterman score: 1855; 75.5% identity (86.3% similar) in 388 aa overlap (143-530:1-351) 120 130 140 150 160 170 pF1KB5 GLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAV : :. :.:::::::.:::::::::::::.: XP_016 MKRKILLDVARTSLQTKVHAELADVLTEVV 10 20 30 180 190 200 210 220 230 pF1KB5 VDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDACILT :::.::... ::::::.:::::::: :::. XP_016 VDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTK--------------------------- 40 50 60 240 250 260 270 280 290 pF1KB5 CNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVI :::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::: XP_016 ----------EVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVI 70 80 90 100 110 300 310 320 330 340 350 pF1KB5 NQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYE :::::::::::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::: XP_016 NQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYE 120 130 140 150 160 170 360 370 380 390 400 410 pF1KB5 YTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAG ::::::::::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::: XP_016 YTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAG 180 190 200 210 220 230 420 430 440 450 460 470 pF1KB5 AVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSE :.::::::::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: : XP_016 AIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVE 240 250 260 270 280 290 480 490 500 510 520 530 pF1KB5 SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG : ::::::::::::::::..:::::::::::::::::::::::::::::::::::::: XP_016 SKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 300 310 320 330 340 350 >>NP_005989 (OMIM: 600114) T-complex protein 1 subunit g (545 aa) initn: 865 init1: 334 opt: 917 Z-score: 1097.3 bits: 212.8 E(85289): 2.2e-54 Smith-Waterman score: 917; 29.4% identity (67.6% similar) in 527 aa overlap (4-522:9-523) 10 20 30 40 50 pF1KB5 MAAVKTLNPKAEVAR-AQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDI : . : : : .: .:.. ::.::. . :..:: ::::. ::::.. : : NP_005 MMGHRPVLVLSQNTKRESGRKVQSG---NINAAKTIADIIRTCLGPKSMMKMLLDPMGGI 10 20 30 40 50 60 70 80 90 100 110 pF1KB5 KLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGL .:.:::..:.:.:.:::.:. . ... .::. .:::::: ... ::.:. :. .. . . NP_005 VMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQM 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB5 HPRIITEGFEAAKEKALQFLEEVKVSREM-DRETLIDVARTSLRTKVHAELADVLTEAVV :: .. ... : . .. :..... .. : . .... .:. ::. .. ... . .. NP_005 HPTVVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIAL 120 130 140 150 160 170 180 190 200 210 220 pF1KB5 DSILAIKKQD---EPIDLF-MIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAC :.. .. .. . ::. . .. .. :. ..::..... . :: :.. ... NP_005 DAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPR 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB5 ILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGF :. . ::::.: : .. . :. .... :...:.. . ::.:: : NP_005 IVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLK------PD--- 240 250 260 270 280 290 300 310 320 330 340 pF1KB5 VVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGH-AG :::..:::. .. : . .:.:.::... . .:.. :::. .. ..: : .: :: NP_005 VVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAG 290 300 310 320 330 340 350 360 370 380 390 400 pF1KB5 LVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVV :. .:.: :::: :..:.. :.:..: .:. :.... ..:.... .:.. : .: NP_005 LLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLV 350 360 370 380 390 400 410 420 430 440 450 460 pF1KB5 PGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQA ::.:: :.:.:.:: ... .. : : .: :.:: .::..: :: : . . :....: NP_005 PGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRA 410 420 430 440 450 460 470 480 490 500 510 520 pF1KB5 EHS-ESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMS .:. :. . ::. .:: . :.:.:. :: : .. . :. .: .:.:. NP_005 KHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKK 470 480 490 500 510 520 530 pF1KB5 SLKG NP_005 KGDDQSRQGGAPDAGQE 530 540 >>NP_036205 (OMIM: 256840,610150) T-complex protein 1 su (541 aa) initn: 693 init1: 316 opt: 859 Z-score: 1028.0 bits: 199.9 E(85289): 1.6e-50 Smith-Waterman score: 859; 32.6% identity (66.1% similar) in 522 aa overlap (19-527:33-539) 10 20 30 40 pF1KB5 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLV :: .: ::... ...::.:::.: ::.: NP_036 SMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMV 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB5 SGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADL . ::. .:.:: ..: :...: :.:..... .::: :::::. :.. : ::..:. NP_036 DKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQ 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB5 YISEGLHPRIITEGFEAAKEKALQFLEEVKVSREMD---RETLIDVARTSLRTKV----H ...:.:: :..:.: : . :.. :.... : .: : ::..:.:.: .:: : NP_036 LLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCH 130 140 150 160 170 180 170 180 190 200 210 220 pF1KB5 AELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDM ..:.. ..::. .. ....: .:. .:.. ::.::.:...:. ::.: NP_036 RQMAEIAVNAVL-TVADMERRD--VDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQM 190 200 210 220 230 230 240 250 260 270 pF1KB5 KKRVEDA--CILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKR :.:::: :::: .: : ... . :.:. . : : :.. .:. ...: NP_036 PKKVEDAKIAILTC--PFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQI----- 240 250 260 270 280 290 280 290 300 310 320 330 pF1KB5 KVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDL : : . ..: : :.: . : .... :.: . ..: ...: :: . :..: NP_036 KETGAN----LAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSEL 300 310 320 330 340 340 350 360 370 380 390 pF1KB5 SPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRA . . :: :::: : ..: ..:. ::.:.: :.::..:.: :: . . : ...:.: . NP_036 TAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCV 350 360 370 380 390 400 400 410 420 430 440 450 pF1KB5 VKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGF ..: : :. :: :.::.:.. : :. .. . : ...:::::: .:: .:..:::. NP_036 IRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGM 410 420 430 440 450 460 460 470 480 490 500 510 pF1KB5 DLQETLVKIQAEH-SESGQLVGVD-LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNI . .:.....:.. .: . .:.: :. : . . : .. ::: . : .. : NP_036 NPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQ-HVIETLIGKKQQISLATQMVRMI 470 480 490 500 510 520 520 530 pF1KB5 LLVDEIMRAGMSSLKG : .:.: . : : NP_036 LKIDDIRKPGESEE 530 540 531 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:10:43 2016 done: Mon Nov 7 04:10:44 2016 Total Scan time: 7.970 Total Display time: 0.100 Function used was FASTA [36.3.4 Apr, 2011]