Result of FASTA (omim) for
pFN21AE0521
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0521, 276 aa
1>>>pF1KE0521 276 - 276 aa - 276 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0853+/-0.000353; mu= 16.0472+/- 0.022
mean_var=64.8116+/-13.168, 0's: 0 Z-trim(113.6): 49 B-trim: 220 in 1/53
Lambda= 0.159312
statistics sampled from 23007 (23060) to 23007 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.27), width: 16
Scan time: 6.900
The best scores are: opt bits E(85289)
NP_001270035 (OMIM: 616830,616878) transport and G ( 276) 1859 435.9 3.8e-122
NP_690870 (OMIM: 616830,616878) transport and Golg ( 276) 1859 435.9 3.8e-122
NP_001270045 (OMIM: 616830,616878) transport and G ( 276) 1859 435.9 3.8e-122
NP_001270058 (OMIM: 616830,616878) transport and G ( 317) 1734 407.3 1.9e-113
NP_001309072 (OMIM: 616830,616878) transport and G ( 317) 1734 407.3 1.9e-113
XP_016884067 (OMIM: 616830,616878) PREDICTED: tran ( 328) 1605 377.6 1.6e-104
XP_016884068 (OMIM: 616830,616878) PREDICTED: tran ( 328) 1605 377.6 1.6e-104
NP_001309071 (OMIM: 616830,616878) transport and G ( 328) 1605 377.6 1.6e-104
XP_016884069 (OMIM: 616830,616878) PREDICTED: tran ( 328) 1605 377.6 1.6e-104
XP_016884066 (OMIM: 616830,616878) PREDICTED: tran ( 328) 1605 377.6 1.6e-104
NP_001309070 (OMIM: 616830,616878) transport and G ( 369) 1480 348.9 8e-96
NP_001270083 (OMIM: 616830,616878) transport and G ( 252) 1351 319.2 5e-87
NP_001270077 (OMIM: 616830,616878) transport and G ( 252) 1351 319.2 5e-87
XP_016884076 (OMIM: 616830,616878) PREDICTED: tran ( 242) 1252 296.4 3.4e-80
NP_001309077 (OMIM: 616830,616878) transport and G ( 242) 1252 296.4 3.4e-80
NP_001309073 (OMIM: 616830,616878) transport and G ( 293) 1226 290.5 2.5e-78
XP_016884077 (OMIM: 616830,616878) PREDICTED: tran ( 169) 1027 244.6 9.4e-65
NP_001309102 (OMIM: 616830,616878) transport and G ( 178) 1012 241.2 1.1e-63
NP_001309104 (OMIM: 616830,616878) transport and G ( 178) 1012 241.2 1.1e-63
NP_001309101 (OMIM: 616830,616878) transport and G ( 178) 1012 241.2 1.1e-63
NP_001309100 (OMIM: 616830,616878) transport and G ( 178) 1012 241.2 1.1e-63
NP_001309103 (OMIM: 616830,616878) transport and G ( 178) 1012 241.2 1.1e-63
XP_011528169 (OMIM: 616830,616878) PREDICTED: tran ( 178) 1012 241.2 1.1e-63
NP_001270164 (OMIM: 616830,616878) transport and G ( 178) 1012 241.2 1.1e-63
XP_016884071 (OMIM: 616830,616878) PREDICTED: tran ( 294) 998 238.1 1.5e-62
XP_016884073 (OMIM: 616830,616878) PREDICTED: tran ( 294) 998 238.1 1.5e-62
XP_016884072 (OMIM: 616830,616878) PREDICTED: tran ( 294) 998 238.1 1.5e-62
XP_016884070 (OMIM: 616830,616878) PREDICTED: tran ( 294) 998 238.1 1.5e-62
NP_001309075 (OMIM: 616830,616878) transport and G ( 294) 998 238.1 1.5e-62
XP_011528167 (OMIM: 616830,616878) PREDICTED: tran ( 174) 902 215.9 4.3e-56
NP_001270144 (OMIM: 616830,616878) transport and G ( 198) 892 213.6 2.3e-55
NP_001270128 (OMIM: 616830,616878) transport and G ( 201) 847 203.3 3.1e-52
NP_001309092 (OMIM: 616830,616878) transport and G ( 214) 842 202.1 7.1e-52
NP_001309095 (OMIM: 616830,616878) transport and G ( 214) 842 202.1 7.1e-52
NP_001270108 (OMIM: 616830,616878) transport and G ( 214) 842 202.1 7.1e-52
NP_001309096 (OMIM: 616830,616878) transport and G ( 214) 842 202.1 7.1e-52
NP_001270115 (OMIM: 616830,616878) transport and G ( 214) 842 202.1 7.1e-52
NP_001309076 (OMIM: 616830,616878) transport and G ( 255) 842 202.2 8.2e-52
NP_001309074 (OMIM: 616830,616878) transport and G ( 255) 842 202.2 8.2e-52
NP_001309084 (OMIM: 616830,616878) transport and G ( 230) 758 182.8 4.9e-46
NP_001309082 (OMIM: 616830,616878) transport and G ( 230) 758 182.8 4.9e-46
NP_001309079 (OMIM: 616830,616878) transport and G ( 230) 758 182.8 4.9e-46
NP_001309089 (OMIM: 616830,616878) transport and G ( 218) 744 179.6 4.4e-45
XP_011528165 (OMIM: 616830,616878) PREDICTED: tran ( 218) 744 179.6 4.4e-45
NP_001309078 (OMIM: 616830,616878) transport and G ( 242) 722 174.6 1.6e-43
NP_001309098 (OMIM: 616830,616878) transport and G ( 190) 624 152.0 7.9e-37
XP_016884075 (OMIM: 616830,616878) PREDICTED: tran ( 266) 624 152.1 1e-36
XP_016884074 (OMIM: 616830,616878) PREDICTED: tran ( 266) 624 152.1 1e-36
NP_001270177 (OMIM: 616830,616878) transport and G ( 107) 618 150.5 1.3e-36
>>NP_001270035 (OMIM: 616830,616878) transport and Golgi (276 aa)
initn: 1859 init1: 1859 opt: 1859 Z-score: 2313.9 bits: 435.9 E(85289): 3.8e-122
Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
190 200 210 220 230 240
250 260 270
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::
NP_001 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
250 260 270
>>NP_690870 (OMIM: 616830,616878) transport and Golgi or (276 aa)
initn: 1859 init1: 1859 opt: 1859 Z-score: 2313.9 bits: 435.9 E(85289): 3.8e-122
Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
190 200 210 220 230 240
250 260 270
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::
NP_690 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
250 260 270
>>NP_001270045 (OMIM: 616830,616878) transport and Golgi (276 aa)
initn: 1859 init1: 1859 opt: 1859 Z-score: 2313.9 bits: 435.9 E(85289): 3.8e-122
Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
190 200 210 220 230 240
250 260 270
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::
NP_001 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
250 260 270
>>NP_001270058 (OMIM: 616830,616878) transport and Golgi (317 aa)
initn: 1734 init1: 1734 opt: 1734 Z-score: 2157.8 bits: 407.3 E(85289): 1.9e-113
Smith-Waterman score: 1734; 98.1% identity (100.0% similar) in 263 aa overlap (14-276:55-317)
10 20 30 40
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNN
.....:::::::::::::::::::::::::
NP_001 PGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEFYSRPSKLADFWGNN
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE0 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE0 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
150 160 170 180 190 200
170 180 190 200 210 220
pF1KE0 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
210 220 230 240 250 260
230 240 250 260 270
pF1KE0 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
270 280 290 300 310
>>NP_001309072 (OMIM: 616830,616878) transport and Golgi (317 aa)
initn: 1734 init1: 1734 opt: 1734 Z-score: 2157.8 bits: 407.3 E(85289): 1.9e-113
Smith-Waterman score: 1734; 98.1% identity (100.0% similar) in 263 aa overlap (14-276:55-317)
10 20 30 40
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNN
.....:::::::::::::::::::::::::
NP_001 PGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEFYSRPSKLADFWGNN
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE0 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE0 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
150 160 170 180 190 200
170 180 190 200 210 220
pF1KE0 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
210 220 230 240 250 260
230 240 250 260 270
pF1KE0 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
270 280 290 300 310
>>XP_016884067 (OMIM: 616830,616878) PREDICTED: transpor (328 aa)
initn: 1605 init1: 1605 opt: 1605 Z-score: 1997.3 bits: 377.6 E(85289): 1.6e-104
Smith-Waterman score: 1607; 83.1% identity (83.1% similar) in 308 aa overlap (1-256:1-308)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTR---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRYCS
190 200 210 220 230 240
240
pF1KE0 -------------------------------------------------TNTIILVDADG
:::::::::::
XP_016 TVGAPPPIPCPTSHARGPAKKPSAHSQSQASSSPEWIPELLPCPDAAAGTNTIILVDADG
250 260 270 280 290 300
250 260 270
pF1KE0 HVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::
XP_016 HVTFTERSMMDKDLSHWETRTYEFTLQS
310 320
>>XP_016884068 (OMIM: 616830,616878) PREDICTED: transpor (328 aa)
initn: 1605 init1: 1605 opt: 1605 Z-score: 1997.3 bits: 377.6 E(85289): 1.6e-104
Smith-Waterman score: 1607; 83.1% identity (83.1% similar) in 308 aa overlap (1-256:1-308)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTR---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRYCS
190 200 210 220 230 240
240
pF1KE0 -------------------------------------------------TNTIILVDADG
:::::::::::
XP_016 TVGAPPPIPCPTSHARGPAKKPSAHSQSQASSSPEWIPELLPCPDAAAGTNTIILVDADG
250 260 270 280 290 300
250 260 270
pF1KE0 HVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::
XP_016 HVTFTERSMMDKDLSHWETRTYEFTLQS
310 320
>>NP_001309071 (OMIM: 616830,616878) transport and Golgi (328 aa)
initn: 1605 init1: 1605 opt: 1605 Z-score: 1997.3 bits: 377.6 E(85289): 1.6e-104
Smith-Waterman score: 1607; 83.1% identity (83.1% similar) in 308 aa overlap (1-256:1-308)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTR---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRYCS
190 200 210 220 230 240
240
pF1KE0 -------------------------------------------------TNTIILVDADG
:::::::::::
NP_001 TVGAPPPIPCPTSHARGPAKKPSAHSQSQASSSPEWIPELLPCPDAAAGTNTIILVDADG
250 260 270 280 290 300
250 260 270
pF1KE0 HVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::
NP_001 HVTFTERSMMDKDLSHWETRTYEFTLQS
310 320
>>XP_016884069 (OMIM: 616830,616878) PREDICTED: transpor (328 aa)
initn: 1605 init1: 1605 opt: 1605 Z-score: 1997.3 bits: 377.6 E(85289): 1.6e-104
Smith-Waterman score: 1607; 83.1% identity (83.1% similar) in 308 aa overlap (1-256:1-308)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTR---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRYCS
190 200 210 220 230 240
240
pF1KE0 -------------------------------------------------TNTIILVDADG
:::::::::::
XP_016 TVGAPPPIPCPTSHARGPAKKPSAHSQSQASSSPEWIPELLPCPDAAAGTNTIILVDADG
250 260 270 280 290 300
250 260 270
pF1KE0 HVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::
XP_016 HVTFTERSMMDKDLSHWETRTYEFTLQS
310 320
>>XP_016884066 (OMIM: 616830,616878) PREDICTED: transpor (328 aa)
initn: 1605 init1: 1605 opt: 1605 Z-score: 1997.3 bits: 377.6 E(85289): 1.6e-104
Smith-Waterman score: 1607; 83.1% identity (83.1% similar) in 308 aa overlap (1-256:1-308)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTR---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRYCS
190 200 210 220 230 240
240
pF1KE0 -------------------------------------------------TNTIILVDADG
:::::::::::
XP_016 TVGAPPPIPCPTSHARGPAKKPSAHSQSQASSSPEWIPELLPCPDAAAGTNTIILVDADG
250 260 270 280 290 300
250 260 270
pF1KE0 HVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::
XP_016 HVTFTERSMMDKDLSHWETRTYEFTLQS
310 320
276 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:02:29 2016 done: Thu Nov 3 02:02:30 2016
Total Scan time: 6.900 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]