FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6104, 131 aa 1>>>pF1KE6104 131 - 131 aa - 131 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5485+/-0.000645; mu= 9.8832+/- 0.039 mean_var=61.3387+/-12.097, 0's: 0 Z-trim(110.1): 8 B-trim: 0 in 0/53 Lambda= 0.163760 statistics sampled from 11343 (11346) to 11343 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.349), width: 16 Scan time: 1.550 The best scores are: opt bits E(32554) CCDS948.1 C1orf54 gene_id:79630|Hs108|chr1 ( 131) 850 208.5 9.5e-55 CCDS72905.1 C1orf54 gene_id:79630|Hs108|chr1 ( 121) 644 159.8 4e-40 >>CCDS948.1 C1orf54 gene_id:79630|Hs108|chr1 (131 aa) initn: 850 init1: 850 opt: 850 Z-score: 1096.4 bits: 208.5 E(32554): 9.5e-55 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE6 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DRLNRLDKDITEAIETTISLETARADHPKPVTVKPVTTEPSPDLNDAVSSLRSPIPLLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 DRLNRLDKDITEAIETTISLETARADHPKPVTVKPVTTEPSPDLNDAVSSLRSPIPLLLS 70 80 90 100 110 120 130 pF1KE6 CAFVQVGMYFM ::::::::::: CCDS94 CAFVQVGMYFM 130 >>CCDS72905.1 C1orf54 gene_id:79630|Hs108|chr1 (121 aa) initn: 644 init1: 644 opt: 644 Z-score: 833.9 bits: 159.8 E(32554): 4e-40 Smith-Waterman score: 644; 100.0% identity (100.0% similar) in 100 aa overlap (1-100:1-100) 10 20 30 40 50 60 pF1KE6 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DRLNRLDKDITEAIETTISLETARADHPKPVTVKPVTTEPSPDLNDAVSSLRSPIPLLLS :::::::::::::::::::::::::::::::::::::::: CCDS72 DRLNRLDKDITEAIETTISLETARADHPKPVTVKPVTTEPVEEGCYDSLDGSLARGNWKI 70 80 90 100 110 120 130 pF1KE6 CAFVQVGMYFM CCDS72 K 131 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:29:20 2016 done: Tue Nov 8 09:29:20 2016 Total Scan time: 1.550 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]