FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1301, 140 aa 1>>>pF1KE1301 140 - 140 aa - 140 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8124+/-0.000917; mu= 13.1269+/- 0.055 mean_var=52.0840+/-10.422, 0's: 0 Z-trim(104.1): 26 B-trim: 39 in 1/49 Lambda= 0.177714 statistics sampled from 7739 (7741) to 7739 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.238), width: 16 Scan time: 1.640 The best scores are: opt bits E(32554) CCDS9845.1 C14orf1 gene_id:11161|Hs108|chr14 ( 140) 911 241.3 1.5e-64 >>CCDS9845.1 C14orf1 gene_id:11161|Hs108|chr14 (140 aa) initn: 911 init1: 911 opt: 911 Z-score: 1272.4 bits: 241.3 E(32554): 1.5e-64 Smith-Waterman score: 911; 100.0% identity (100.0% similar) in 140 aa overlap (1-140:1-140) 10 20 30 40 50 60 pF1KE1 MSRFLNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 MSRFLNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAAPTIGVLAPLMVASFSILG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 SVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAAPTIGVLAPLMVASFSILG 70 80 90 100 110 120 130 140 pF1KE1 MLVGLRYLEVEPVSRQKKRN :::::::::::::::::::: CCDS98 MLVGLRYLEVEPVSRQKKRN 130 140 140 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:13:45 2016 done: Mon Nov 7 04:13:45 2016 Total Scan time: 1.640 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]