FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6158, 120 aa 1>>>pF1KE6158 120 - 120 aa - 120 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2360+/-0.000605; mu= 12.2784+/- 0.037 mean_var=75.9708+/-14.886, 0's: 0 Z-trim(113.3): 10 B-trim: 0 in 0/52 Lambda= 0.147147 statistics sampled from 13950 (13959) to 13950 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.429), width: 16 Scan time: 1.460 The best scores are: opt bits E(32554) CCDS35355.1 BEX4 gene_id:56271|Hs108|chrX ( 120) 840 186.3 4e-48 CCDS14508.1 BEX3 gene_id:27018|Hs108|chrX ( 111) 371 86.7 3.5e-18 CCDS14509.1 BEX3 gene_id:27018|Hs108|chrX ( 101) 344 80.9 1.7e-16 CCDS35350.1 BEX5 gene_id:340542|Hs108|chrX ( 111) 279 67.1 2.7e-12 CCDS35354.1 BEX1 gene_id:55859|Hs108|chrX ( 125) 270 65.3 1.1e-11 >>CCDS35355.1 BEX4 gene_id:56271|Hs108|chrX (120 aa) initn: 840 init1: 840 opt: 840 Z-score: 977.5 bits: 186.3 E(32554): 4e-48 Smith-Waterman score: 840; 100.0% identity (100.0% similar) in 120 aa overlap (1-120:1-120) 10 20 30 40 50 60 pF1KE6 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP 70 80 90 100 110 120 >>CCDS14508.1 BEX3 gene_id:27018|Hs108|chrX (111 aa) initn: 394 init1: 131 opt: 371 Z-score: 439.9 bits: 86.7 E(32554): 3.5e-18 Smith-Waterman score: 371; 55.0% identity (75.7% similar) in 111 aa overlap (16-120:3-111) 10 20 30 40 50 60 pF1KE6 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP : .:::: :: : :: ::.: ::::::..:.:: :::..:::.: CCDS14 MANIHQENEEMEQ-PMQNGEEDRPLGGGEGHQPAGN-RRGQARRLAP 10 20 30 40 70 80 90 100 110 pF1KE6 NFRWAIPNRHIEHNEARD--DVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYD--- :::::::::.:. . . : :.: :. .: ::.:: :: :.:. .:. : .::.: CCDS14 NFRWAIPNRQINDGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHD 50 60 70 80 90 100 120 pF1KE6 -FCLIP :::.: CCDS14 EFCLMP 110 >>CCDS14509.1 BEX3 gene_id:27018|Hs108|chrX (101 aa) initn: 347 init1: 131 opt: 344 Z-score: 409.5 bits: 80.9 E(32554): 1.7e-16 Smith-Waterman score: 344; 53.5% identity (76.2% similar) in 101 aa overlap (26-120:2-101) 10 20 30 40 50 60 pF1KE6 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP . : :: ::.: ::::::..:.:: :::..:::.: CCDS14 MEQPMQNGEEDRPLGGGEGHQPAGN-RRGQARRLAP 10 20 30 70 80 90 100 110 pF1KE6 NFRWAIPNRHIEHNEARD--DVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYD--- :::::::::.:. . . : :.: :. .: ::.:: :: :.:. .:. : .::.: CCDS14 NFRWAIPNRQINDGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHD 40 50 60 70 80 90 120 pF1KE6 -FCLIP :::.: CCDS14 EFCLMP 100 >>CCDS35350.1 BEX5 gene_id:340542|Hs108|chrX (111 aa) initn: 256 init1: 104 opt: 279 Z-score: 334.3 bits: 67.1 E(32554): 2.7e-12 Smith-Waterman score: 279; 41.6% identity (67.3% similar) in 113 aa overlap (15-120:2-111) 10 20 30 40 50 60 pF1KE6 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP ::. .::. :.::.::: . ::::: :.::::.. : .: CCDS35 MENVPKENKVVEKAPVQNEAPA--LGGGEYQEPGGNVK-GVWAPPAP 10 20 30 40 70 80 90 100 110 pF1KE6 NFRWAIPNRHIEHNEA----RDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---DNH .: .::: ... . ::.:::. .: :..:: :: :.:. .:. .: :.: CCDS35 GFGEDVPNRLVDNIDMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHH 50 60 70 80 90 100 120 pF1KE6 YDFCLIP .:::.: CCDS35 DEFCLMP 110 >>CCDS35354.1 BEX1 gene_id:55859|Hs108|chrX (125 aa) initn: 308 init1: 179 opt: 270 Z-score: 323.3 bits: 65.3 E(32554): 1.1e-11 Smith-Waterman score: 270; 38.9% identity (68.3% similar) in 126 aa overlap (1-120:1-125) 10 20 30 40 50 60 pF1KE6 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP :::::. :.:.:. :::.:::: ::. ...: . : .:: : :: :: :::. . CCDS35 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 NFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---DNHY ..:: . .: . . .:: ...::. .. .. .: ::.:. : .: . .: :.: CCDS35 QYRWDMMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHD 70 80 90 100 110 120 pF1KE6 DFCLIP .:::.: CCDS35 EFCLMP 120 120 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:57:24 2016 done: Tue Nov 8 09:57:25 2016 Total Scan time: 1.460 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]