FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6101, 103 aa 1>>>pF1KE6101 103 - 103 aa - 103 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1763+/-0.000566; mu= 9.8865+/- 0.034 mean_var=46.4763+/- 9.318, 0's: 0 Z-trim(110.3): 4 B-trim: 0 in 0/52 Lambda= 0.188130 statistics sampled from 11521 (11524) to 11521 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.354), width: 16 Scan time: 1.300 The best scores are: opt bits E(32554) CCDS8397.1 ATP5L gene_id:10632|Hs108|chr11 ( 103) 655 184.3 1.2e-47 CCDS54534.1 ATP5L2 gene_id:267020|Hs108|chr22 ( 100) 558 158.0 9.5e-40 >>CCDS8397.1 ATP5L gene_id:10632|Hs108|chr11 (103 aa) initn: 655 init1: 655 opt: 655 Z-score: 969.2 bits: 184.3 E(32554): 1.2e-47 Smith-Waterman score: 655; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103) 10 20 30 40 50 60 pF1KE6 MAQFVRNLVEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MAQFVRNLVEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSA 10 20 30 40 50 60 70 80 90 100 pF1KE6 QTGSFKQLTVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV ::::::::::::::::::::::::::::::::::::::::::: CCDS83 QTGSFKQLTVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV 70 80 90 100 >>CCDS54534.1 ATP5L2 gene_id:267020|Hs108|chr22 (100 aa) initn: 558 init1: 558 opt: 558 Z-score: 827.1 bits: 158.0 E(32554): 9.5e-40 Smith-Waterman score: 558; 89.0% identity (93.0% similar) in 100 aa overlap (1-100:1-100) 10 20 30 40 50 60 pF1KE6 MAQFVRNLVEKTPALVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSA :: ::::::::::::::::::: :::::.::::. ::::::::::::::::::::::.:: CCDS54 MAPFVRNLVEKTPALVNAAVTYLKPRLAAFWYYTTVELVPPTPAEIPRAIQSLKKIVSSA 10 20 30 40 50 60 70 80 90 100 pF1KE6 QTGSFKQLTVKEAVLNGLVATEVLMWFYVGEIIGKRGIIGYDV :::::::::::::.::::::::: :::: :: ::::::: CCDS54 QTGSFKQLTVKEALLNGLVATEVSTWFYVREITGKRGIIG 70 80 90 100 103 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:27:43 2016 done: Tue Nov 8 09:27:43 2016 Total Scan time: 1.300 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]