FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3902, 181 aa 1>>>pF1KE3902 181 - 181 aa - 181 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0763+/-0.000998; mu= 14.0670+/- 0.061 mean_var=71.3515+/-15.766, 0's: 0 Z-trim(104.0): 149 B-trim: 537 in 2/48 Lambda= 0.151835 statistics sampled from 7530 (7706) to 7530 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.237), width: 16 Scan time: 1.580 The best scores are: opt bits E(32554) CCDS44958.1 ARL1 gene_id:400|Hs108|chr12 ( 181) 1169 265.1 1.7e-71 CCDS73510.1 ARL1 gene_id:400|Hs108|chr12 ( 135) 870 199.5 6.9e-52 CCDS1565.1 ARF1 gene_id:375|Hs108|chr1 ( 181) 723 167.4 4.2e-42 CCDS8774.1 ARF3 gene_id:377|Hs108|chr12 ( 181) 719 166.5 7.8e-42 CCDS34745.1 ARF5 gene_id:381|Hs108|chr7 ( 180) 711 164.8 2.6e-41 CCDS2884.1 ARF4 gene_id:378|Hs108|chr3 ( 180) 699 162.2 1.6e-40 CCDS9695.1 ARF6 gene_id:382|Hs108|chr14 ( 175) 668 155.4 1.8e-38 CCDS2195.1 ARL5A gene_id:26225|Hs108|chr2 ( 179) 582 136.5 8.4e-33 CCDS7131.1 ARL5B gene_id:221079|Hs108|chr10 ( 179) 577 135.4 1.8e-32 CCDS3987.1 TRIM23 gene_id:373|Hs108|chr5 ( 574) 561 132.3 5e-31 CCDS7538.1 ARL3 gene_id:403|Hs108|chr10 ( 182) 524 123.8 5.7e-29 CCDS43322.1 TRIM23 gene_id:373|Hs108|chr5 ( 569) 514 122.0 6.2e-28 CCDS3986.1 TRIM23 gene_id:373|Hs108|chr5 ( 546) 504 119.8 2.7e-27 CCDS8088.1 ARL2 gene_id:402|Hs108|chr11 ( 184) 498 118.1 3e-27 CCDS46425.1 ARL5A gene_id:26225|Hs108|chr2 ( 142) 466 111.0 3.1e-25 CCDS3192.1 ARL14 gene_id:80117|Hs108|chr3 ( 192) 456 109.0 1.8e-24 CCDS45664.1 ARL5C gene_id:390790|Hs108|chr17 ( 179) 447 107.0 6.7e-24 CCDS5359.1 ARL4A gene_id:10124|Hs108|chr7 ( 200) 427 102.6 1.5e-22 CCDS2512.1 ARL4C gene_id:10123|Hs108|chr2 ( 192) 424 101.9 2.3e-22 CCDS63169.1 ARL4C gene_id:10123|Hs108|chr2 ( 201) 424 102.0 2.4e-22 CCDS2928.1 ARL6 gene_id:84100|Hs108|chr3 ( 186) 416 100.2 7.6e-22 CCDS9419.1 ARL11 gene_id:115761|Hs108|chr13 ( 196) 412 99.3 1.5e-21 CCDS2566.1 ARL8B gene_id:55207|Hs108|chr3 ( 186) 399 96.5 1e-20 CCDS1421.1 ARL8A gene_id:127829|Hs108|chr1 ( 186) 389 94.3 4.6e-20 CCDS11463.1 ARL4D gene_id:379|Hs108|chr17 ( 201) 376 91.4 3.5e-19 CCDS74087.1 ARL17A gene_id:51326|Hs108|chr17 ( 141) 359 87.6 3.5e-18 CCDS55770.1 ARL2 gene_id:402|Hs108|chr11 ( 157) 353 86.3 9.5e-18 CCDS82144.1 ARL17B gene_id:100506084|Hs108|chr17 ( 95) 349 85.3 1.2e-17 CCDS82146.1 ARL17A gene_id:51326|Hs108|chr17 ( 95) 349 85.3 1.2e-17 CCDS74086.1 ARL17A gene_id:51326|Hs108|chr17 ( 88) 345 84.4 2.1e-17 CCDS54137.1 ARL17B gene_id:100506084|Hs108|chr17 ( 125) 345 84.5 2.7e-17 CCDS45717.1 ARL17A gene_id:51326|Hs108|chr17 ( 125) 345 84.5 2.7e-17 CCDS45718.1 ARL17A gene_id:51326|Hs108|chr17 ( 177) 345 84.6 3.5e-17 CCDS58557.1 ARL17B gene_id:100506084|Hs108|chr17 ( 177) 345 84.6 3.5e-17 CCDS13533.1 ARFRP1 gene_id:10139|Hs108|chr20 ( 201) 324 80.1 9.4e-16 CCDS4400.1 ARL10 gene_id:285598|Hs108|chr5 ( 244) 313 77.7 5.8e-15 CCDS46630.1 ARFRP1 gene_id:10139|Hs108|chr20 ( 173) 290 72.6 1.5e-13 CCDS2925.1 ARL13B gene_id:200894|Hs108|chr3 ( 428) 284 71.5 7.3e-13 CCDS73004.1 ARL8A gene_id:127829|Hs108|chr1 ( 147) 272 68.6 2e-12 CCDS54850.1 ARL15 gene_id:54622|Hs108|chr5 ( 204) 267 67.6 5.5e-12 CCDS45813.1 ARL16 gene_id:339231|Hs108|chr17 ( 197) 266 67.3 6.2e-12 CCDS4177.1 SAR1B gene_id:51128|Hs108|chr5 ( 198) 266 67.3 6.2e-12 CCDS7298.1 SAR1A gene_id:56681|Hs108|chr10 ( 198) 266 67.3 6.2e-12 CCDS68172.1 ARFRP1 gene_id:10139|Hs108|chr20 ( 154) 256 65.1 2.3e-11 >>CCDS44958.1 ARL1 gene_id:400|Hs108|chr12 (181 aa) initn: 1169 init1: 1169 opt: 1169 Z-score: 1397.3 bits: 265.1 E(32554): 1.7e-71 Smith-Waterman score: 1169; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 130 140 150 160 170 180 pF1KE3 Q : CCDS44 Q >>CCDS73510.1 ARL1 gene_id:400|Hs108|chr12 (135 aa) initn: 870 init1: 870 opt: 870 Z-score: 1045.1 bits: 199.5 E(32554): 6.9e-52 Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 133 aa overlap (49-181:3-135) 20 30 40 50 60 70 pF1KE3 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYW :::::::::::::::::::::::::::::: CCDS73 MAIGFNVETVTYKNLKFQVWDLGGQTSIRPYW 10 20 30 80 90 100 110 120 130 pF1KE3 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSE 40 50 60 70 80 90 140 150 160 170 180 pF1KE3 MANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ ::::::::::::::::::::::::::::::::::::::::::: CCDS73 MANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 100 110 120 130 >>CCDS1565.1 ARF1 gene_id:375|Hs108|chr1 (181 aa) initn: 738 init1: 723 opt: 723 Z-score: 869.3 bits: 167.4 E(32554): 4.2e-42 Smith-Waterman score: 723; 56.9% identity (87.3% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN ::..:...:..::: .:::::..:::.::::::::.:..::.:::::::::::::: ::: CCDS15 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI ..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :. CCDS15 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR :.:::::::. .::...:....::: .:. :.: : : ::.: :: :...:: . :... CCDS15 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 130 140 150 160 170 180 pF1KE3 Q . CCDS15 K >>CCDS8774.1 ARF3 gene_id:377|Hs108|chr12 (181 aa) initn: 719 init1: 719 opt: 719 Z-score: 864.5 bits: 166.5 E(32554): 7.8e-42 Smith-Waterman score: 719; 56.9% identity (87.8% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN ::..:.....::.: .:::::..:::.::::::::.:..::.:::::::::::::: ::: CCDS87 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI ..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :. CCDS87 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR :.:::::::. .::...:....::: .:. :.: : : ::.: :: :...::.. ::.. CCDS87 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 130 140 150 160 170 180 pF1KE3 Q . CCDS87 K >>CCDS34745.1 ARF5 gene_id:381|Hs108|chr7 (180 aa) initn: 727 init1: 711 opt: 711 Z-score: 855.1 bits: 164.8 E(32554): 2.6e-41 Smith-Waterman score: 711; 58.3% identity (82.8% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN :: :..:: .:: ..::::..:::.::::::::.:..::.:::::::::::::: ::: CCDS34 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI . : :::.::: .::: :: :..::...:.:::: ::.:. : .:: ::.:.::: :. CCDS34 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR :.:::::::: .:: ::....::: :..: : . : ::.:::: ....:: . :..: CCDS34 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 130 140 150 160 170 180 pF1KE3 Q >>CCDS2884.1 ARF4 gene_id:378|Hs108|chr3 (180 aa) initn: 699 init1: 699 opt: 699 Z-score: 840.9 bits: 162.2 E(32554): 1.6e-40 Smith-Waterman score: 699; 58.3% identity (82.2% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN :: .::.:: ::: ..::::..:::.::::::::.:..::.:::::::::::::: ::: CCDS28 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI . : :::.::: ::: :. :..::...:.:::: ::.:: .:: :: .::: :. CCDS28 ICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR :..::::::. .::. :::...::: .:..: : . : ::.:::: :...:: . :..: CCDS28 LLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 130 140 150 160 170 180 pF1KE3 Q >>CCDS9695.1 ARF6 gene_id:382|Hs108|chr14 (175 aa) initn: 668 init1: 668 opt: 668 Z-score: 804.4 bits: 155.4 E(32554): 1.8e-38 Smith-Waterman score: 668; 55.2% identity (84.3% similar) in 172 aa overlap (8-179:4-175) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN ..:..::..:::::.::::.::::::::.:..:. ::::::.::::::::::: CCDS96 MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI .::.:::.::: .::: :: ::..:...:.::: ::::: ...:: .....:.: :: CCDS96 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAI 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR ...::::::. .:: :. ..::: ..::.: . . ::.: :: :.. ::. . :: CCDS96 ILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 120 130 140 150 160 170 pF1KE3 Q >>CCDS2195.1 ARL5A gene_id:26225|Hs108|chr2 (179 aa) initn: 586 init1: 568 opt: 582 Z-score: 702.4 bits: 136.5 E(32554): 8.4e-33 Smith-Waterman score: 582; 48.9% identity (76.7% similar) in 180 aa overlap (1-180:1-179) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN :: .:. :. ::. .: ...:.:::.::::::::.....::: : :::: ::: .. .: CCDS21 MGILFTRIWR-LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINN 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI .: .::.::: :.: : ::.::. :: :::: ::.::.... :: :: .:.:::: CCDS21 TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR :..::::::... :: .:... : : ..::..:.: : : :: ...::.. :: : CCDS21 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLKIR 120 130 140 150 160 170 pF1KE3 Q >>CCDS7131.1 ARL5B gene_id:221079|Hs108|chr10 (179 aa) initn: 566 init1: 566 opt: 577 Z-score: 696.5 bits: 135.4 E(32554): 1.8e-32 Smith-Waterman score: 577; 48.9% identity (76.7% similar) in 180 aa overlap (1-180:1-179) 10 20 30 40 50 60 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN :: .:....: :: ..: ...:.:::.::::::::.. ..::: : :::: ::: .. :: CCDS71 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKN 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI .: .::.::: :.: : :::::. .: :::: ::.:..:.: :: :: .:.:::: CCDS71 THFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR ...:::::::. ::..:... : : ..::. :.: . : : :: ...::.. . : CCDS71 VLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRIGVR 120 130 140 150 160 170 pF1KE3 Q >>CCDS3987.1 TRIM23 gene_id:373|Hs108|chr5 (574 aa) initn: 514 init1: 485 opt: 561 Z-score: 670.5 bits: 132.3 E(32554): 5e-31 Smith-Waterman score: 561; 53.1% identity (77.2% similar) in 162 aa overlap (17-177:404-565) 10 20 30 40 pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTI :.:.. ::::::::::::..:. : . : CCDS39 FTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPI 380 390 400 410 420 430 50 60 70 80 90 100 pF1KE3 PTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSE :::::::::: :::::: .::.::. ..:: :. :: ::.::..:::: ::::. ..:: CCDS39 PTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSE 440 450 460 470 480 490 110 120 130 140 150 160 pF1KE3 LVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALK-DRKWQIFKTSATKGTG :. .: :.::: :.:..::::::. :.. :... :.: : :.: : .: .: : CCDS39 LAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMG 500 510 520 530 540 550 170 180 pF1KE3 LDEAMEWLVETLKSRQ : :...:: . : CCDS39 LYEGLDWLSRQLVAAGVLDVA 560 570 181 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:06:43 2016 done: Sun Nov 6 09:06:43 2016 Total Scan time: 1.580 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]