(Linear) (Six-base) MAPSORT of: KIBB5347.seq Check: 2592 from: 1 to: 1305 KIBB5347.orf With 182 enzymes: SgfI * July 15, 2010 18:29 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 255 1305 Size: 255 1050 AatII G_ACGT'C Cuts at: 0 524 1305 Size: 524 781 AccI GT'mk_AC Cuts at: 0 17 1305 Size: 17 1288 Acc65I G'GTAC_C Cuts at: 0 1241 1305 Size: 1241 64 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 52 1240 1305 Size: 52 1188 65 Fragments arranged by size: 1188 65 52 AflIII A'CryG_T Cuts at: 0 77 221 1305 Size: 77 144 1084 Fragments arranged by size: 1084 144 77 AleI CACnn'nnGTG Cuts at: 0 755 1305 Size: 755 550 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 406 619 1225 1305 Size: 406 213 606 80 Fragments arranged by size: 606 406 213 80 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 730 762 1305 Size: 730 32 543 Fragments arranged by size: 730 543 32 AlwNI CAG_nnn'CTG Cuts at: 0 1251 1305 Size: 1251 54 ApaI G_GGCC'C Cuts at: 0 438 1110 1305 Size: 438 672 195 Fragments arranged by size: 672 438 195 AvaI C'yCGr_G Cuts at: 0 648 658 1042 1080 1305 Size: 648 10 384 38 225 Fragments arranged by size: 648 384 225 38 10 BanI G'GyrC_C Cuts at: 0 1241 1305 Size: 1241 64 BanII G_rGCy'C Cuts at: 0 350 438 625 827 1110 1305 Size: 350 88 187 202 283 195 Fragments arranged by size: 350 283 202 195 187 88 BbsI GAAGACnn'nnnn_ Cuts at: 0 633 1145 1305 Size: 633 512 160 Fragments arranged by size: 633 512 160 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 597 631 1305 Size: 597 34 674 Fragments arranged by size: 674 597 34 BclI T'GATC_A Cuts at: 0 917 1305 Size: 917 388 Bme1580I G_kGCm'C Cuts at: 0 438 986 1110 1305 Size: 438 548 124 195 Fragments arranged by size: 548 438 195 124 BmgBI CAC'GTC Cuts at: 0 72 852 1305 Size: 72 780 453 Fragments arranged by size: 780 453 72 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 661 909 1305 Size: 661 248 396 Fragments arranged by size: 661 396 248 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 313 754 1305 Size: 313 441 551 Fragments arranged by size: 551 441 313 BsaAI yAC'GTr Cuts at: 0 21 1305 Size: 21 1284 BsaBI GATnn'nnATC Cuts at: 0 868 1305 Size: 868 437 BsaHI Gr'CG_yC Cuts at: 0 521 1305 Size: 521 784 BsaWI w'CCGG_w Cuts at: 0 1295 1305 Size: 1295 10 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 136 139 310 313 1305 Size: 136 3 171 3 992 Fragments arranged by size: 992 171 136 3 3 BseYI C'CCAG_C Cuts at: 0 570 1305 Size: 570 735 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 283 1305 Size: 283 1022 BsiHKAI G_wGCw'C Cuts at: 0 47 95 350 827 1305 Size: 47 48 255 477 478 Fragments arranged by size: 478 477 255 48 47 BsmBI CGTCTCn'nnnn_ Cuts at: 0 844 1305 Size: 844 461 Bsp1286I G_dGCh'C Cuts at: 0 47 95 350 438 625 827 986 1110 Size: 47 48 255 88 187 202 159 124 Cuts at: 1110 1305 Size: 195 Fragments arranged by size: 255 202 195 187 159 124 88 48 47 BspEI T'CCGG_A Cuts at: 0 1295 1305 Size: 1295 10 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 255 1305 Size: 255 1050 BsrDI GCAATG_nn' Cuts at: 0 603 1305 Size: 603 702 BstAPI GCAn_nnn'nTGC Cuts at: 0 99 1305 Size: 99 1206 BstXI CCAn_nnnn'nTGG Cuts at: 0 111 963 1305 Size: 111 852 342 Fragments arranged by size: 852 342 111 BstYI r'GATC_y Cuts at: 0 386 968 1178 1305 Size: 386 582 210 127 Fragments arranged by size: 582 386 210 127 BtgI C'CryG_G Cuts at: 0 63 153 439 708 725 1305 Size: 63 90 286 269 17 580 Fragments arranged by size: 580 286 269 90 63 17 EaeI y'GGCC_r Cuts at: 0 442 1305 Size: 442 863 EarI CTCTTCn'nnn_ Cuts at: 0 1228 1305 Size: 1228 77 EcoICRI GAG'CTC Cuts at: 0 348 825 1305 Size: 348 477 480 Fragments arranged by size: 480 477 348 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 52 313 754 1240 1305 Size: 52 261 441 486 65 Fragments arranged by size: 486 441 261 65 52 EcoNI CCTnn'n_nnAGG Cuts at: 0 253 1305 Size: 253 1052 EcoO109I rG'GnC_Cy Cuts at: 0 434 435 687 1038 1248 1305 Size: 434 1 252 351 210 57 Fragments arranged by size: 434 351 252 210 57 1 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 708 1305 Size: 708 597 FspI TGC'GCA Cuts at: 0 607 1305 Size: 607 698 HaeII r_GCGC'y Cuts at: 0 14 590 1305 Size: 14 576 715 Fragments arranged by size: 715 576 14 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 814 846 982 1014 1305 Size: 814 32 136 32 291 Fragments arranged by size: 814 291 136 32 32 HincII GTy'rAC Cuts at: 0 537 950 1305 Size: 537 413 355 Fragments arranged by size: 537 413 355 KpnI G_GTAC'C Cuts at: 0 1245 1305 Size: 1245 60 MluI A'CGCG_T Cuts at: 0 221 1305 Size: 221 1084 MslI CAynn'nnrTG Cuts at: 0 109 631 755 979 1207 1305 Size: 109 522 124 224 228 98 Fragments arranged by size: 522 228 224 124 109 98 MspA1I CmG'CkG Cuts at: 0 441 710 1305 Size: 441 269 595 Fragments arranged by size: 595 441 269 NspI r_CATG'y Cuts at: 0 81 657 1305 Size: 81 576 648 Fragments arranged by size: 648 576 81 PasI CC'CwG_GG Cuts at: 0 1256 1305 Size: 1256 49 PciI A'CATG_T Cuts at: 0 77 1305 Size: 77 1228 PflMI CCAn_nnn'nTGG Cuts at: 0 423 1305 Size: 423 882 PfoI T'CCnGG_A Cuts at: 0 308 1305 Size: 308 997 PpuMI rG'GwC_Cy Cuts at: 0 687 1038 1305 Size: 687 351 267 Fragments arranged by size: 687 351 267 PspOMI G'GGCC_C Cuts at: 0 434 1106 1305 Size: 434 672 199 Fragments arranged by size: 672 434 199 PstI C_TGCA'G Cuts at: 0 395 1305 Size: 395 910 RsrII CG'GwC_CG Cuts at: 0 479 1305 Size: 479 826 SacI G_AGCT'C Cuts at: 0 350 827 1305 Size: 350 477 478 Fragments arranged by size: 478 477 350 SacII CC_GC'GG Cuts at: 0 442 711 1305 Size: 442 269 594 Fragments arranged by size: 594 442 269 SanDI GG'GwC_CC Cuts at: 0 1038 1305 Size: 1038 267 SbfI CC_TGCA'GG Cuts at: 0 395 1305 Size: 395 910 ScaI AGT'ACT Cuts at: 0 280 1305 Size: 280 1025 SfcI C'TryA_G Cuts at: 0 391 1305 Size: 391 914 SmaI CCC'GGG Cuts at: 0 1082 1305 Size: 1082 223 SphI G_CATG'C Cuts at: 0 657 1305 Size: 657 648 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 862 1017 1248 1305 Size: 862 155 231 57 Fragments arranged by size: 862 231 155 57 TatI w'GTAC_w Cuts at: 0 278 398 911 1305 Size: 278 120 513 394 Fragments arranged by size: 513 394 278 120 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 48 80 1305 Size: 48 32 1225 Fragments arranged by size: 1225 48 32 Tth111I GACn'n_nGTC Cuts at: 0 685 1305 Size: 685 620 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 563 1305 Size: 563 742 XmaI C'CCGG_G Cuts at: 0 1080 1305 Size: 1080 225 ZraI GAC'GTC Cuts at: 0 522 1305 Size: 522 783 Enzymes that do cut: AarI AatII AccI Acc65I AcuI AflIII AleI AlfI AloI AlwNI ApaI AvaI BanI BanII BbsI BcgI BclI Bme1580I BmgBI BplI BpmI BsaAI BsaBI BsaHI BsaWI BseRI BseYI BsgI BsiHKAI BsmBI Bsp1286I BspEI BspMI BsrDI BstAPI BstXI BstYI BtgI EaeI EarI EcoICRI Eco57MI EcoNI EcoO109I FalI FspI HaeII Hin4I HincII KpnI MluI MslI MspA1I NspI PasI PciI PflMI PfoI PpuMI PspOMI PstI RsrII SacI SacII SanDI SbfI ScaI SfcI SmaI SphI TaqII TatI TstI Tth111I XcmI XmaI ZraI Enzymes that do not cut: AclI AfeI AflII AgeI AhdI ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbeI BbvCI BciVI BfrBI BglI BglII BlpI BmrI BmtI Bpu10I BpuEI BsaI BsaXI BsiEI BsiWI BsmI BspHI BsrBI BsrFI BsrGI BssHII BssSI BstBI BstEII BstZ17I Bsu36I BtgZI BtsI ClaI CspCI DraI DraIII DrdI EagI EciI EcoRI EcoRV FseI FspAI HindIII HpaI KasI MfeI MmeI MscI NaeI NarI NcoI NdeI NgoMIV NheI NotI NruI NsiI PacI PmeI PmlI PpiI PshAI PsiI PspXI PsrI PvuI PvuII SalI SapI SexAI SfiI SfoI SgfI SgrAI SmlI SnaBI SpeI SrfI SspI StuI StyI SwaI XbaI XhoI XmnI