Result of FASTA (omim) for
pFN21AE0327
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0327, 618 aa
1>>>pF1KE0327 618 - 618 aa - 618 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6715+/-0.000453; mu= 23.1094+/- 0.028
mean_var=74.7054+/-16.098, 0's: 0 Z-trim(110.5): 60 B-trim: 378 in 1/52
Lambda= 0.148388
statistics sampled from 18849 (18893) to 18849 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.567), E-opt: 0.2 (0.222), width: 16
Scan time: 10.560
The best scores are: opt bits E(85289)
NP_079016 (OMIM: 263210,606941,608776) alpha-1,2-m ( 618) 4241 918.1 0
XP_005277780 (OMIM: 263210,606941,608776) PREDICTE ( 629) 4233 916.4 0
NP_001071158 (OMIM: 263210,606941,608776) alpha-1, ( 611) 4166 902.0 0
XP_005277781 (OMIM: 263210,606941,608776) PREDICTE ( 622) 4158 900.3 0
XP_011541294 (OMIM: 263210,606941,608776) PREDICTE ( 618) 3992 864.8 0
XP_006718976 (OMIM: 263210,606941,608776) PREDICTE ( 598) 3979 862.0 0
XP_016873802 (OMIM: 263210,606941,608776) PREDICTE ( 611) 3917 848.7 0
XP_016873808 (OMIM: 263210,606941,608776) PREDICTE ( 447) 3074 668.1 1.8e-191
NP_001071159 (OMIM: 263210,606941,608776) alpha-1, ( 447) 3074 668.1 1.8e-191
XP_016873809 (OMIM: 263210,606941,608776) PREDICTE ( 447) 3074 668.1 1.8e-191
XP_016873805 (OMIM: 263210,606941,608776) PREDICTE ( 458) 3066 666.4 5.9e-191
XP_016873811 (OMIM: 263210,606941,608776) PREDICTE ( 440) 2999 652.0 1.2e-186
XP_016873810 (OMIM: 263210,606941,608776) PREDICTE ( 440) 2999 652.0 1.2e-186
NP_001071160 (OMIM: 263210,606941,608776) alpha-1, ( 440) 2999 652.0 1.2e-186
XP_016873806 (OMIM: 263210,606941,608776) PREDICTE ( 451) 2991 650.3 4e-186
XP_016873807 (OMIM: 263210,606941,608776) PREDICTE ( 451) 2991 650.3 4e-186
XP_016873814 (OMIM: 263210,606941,608776) PREDICTE ( 415) 2832 616.3 6.7e-176
XP_016873812 (OMIM: 263210,606941,608776) PREDICTE ( 440) 2750 598.7 1.3e-170
XP_016873813 (OMIM: 263210,606941,608776) PREDICTE ( 420) 2737 595.9 8.9e-170
XP_016873804 (OMIM: 263210,606941,608776) PREDICTE ( 570) 2028 444.3 5.4e-124
XP_016873803 (OMIM: 263210,606941,608776) PREDICTE ( 577) 2028 444.3 5.5e-124
XP_016873815 (OMIM: 263210,606941,608776) PREDICTE ( 399) 1875 411.4 3.1e-114
NP_004846 (OMIM: 604122) GPI mannosyltransferase 3 ( 554) 219 57.0 2e-07
>>NP_079016 (OMIM: 263210,606941,608776) alpha-1,2-manno (618 aa)
initn: 4241 init1: 4241 opt: 4241 Z-score: 4907.0 bits: 918.1 E(85289): 0
Smith-Waterman score: 4241; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
550 560 570 580 590 600
610
pF1KE0 YTILKPRKAKQIRKKSGG
::::::::::::::::::
NP_079 YTILKPRKAKQIRKKSGG
610
>>XP_005277780 (OMIM: 263210,606941,608776) PREDICTED: a (629 aa)
initn: 4233 init1: 4233 opt: 4233 Z-score: 4897.7 bits: 916.4 E(85289): 0
Smith-Waterman score: 4233; 100.0% identity (100.0% similar) in 617 aa overlap (1-617:1-617)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
550 560 570 580 590 600
610
pF1KE0 YTILKPRKAKQIRKKSGG
:::::::::::::::::
XP_005 YTILKPRKAKQIRKKSGDRRRAEPTYRKN
610 620
>>NP_001071158 (OMIM: 263210,606941,608776) alpha-1,2-ma (611 aa)
initn: 2675 init1: 2675 opt: 4166 Z-score: 4820.3 bits: 902.0 E(85289): 0
Smith-Waterman score: 4166; 98.9% identity (98.9% similar) in 618 aa overlap (1-618:1-611)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_001 FFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
540 550 560 570 580 590
610
pF1KE0 YTILKPRKAKQIRKKSGG
::::::::::::::::::
NP_001 YTILKPRKAKQIRKKSGG
600 610
>>XP_005277781 (OMIM: 263210,606941,608776) PREDICTED: a (622 aa)
initn: 2675 init1: 2675 opt: 4158 Z-score: 4810.9 bits: 900.3 E(85289): 0
Smith-Waterman score: 4158; 98.9% identity (98.9% similar) in 617 aa overlap (1-617:1-610)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_005 FFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
540 550 560 570 580 590
610
pF1KE0 YTILKPRKAKQIRKKSGG
:::::::::::::::::
XP_005 YTILKPRKAKQIRKKSGDRRRAEPTYRKN
600 610 620
>>XP_011541294 (OMIM: 263210,606941,608776) PREDICTED: a (618 aa)
initn: 3991 init1: 3991 opt: 3992 Z-score: 4618.9 bits: 864.8 E(85289): 0
Smith-Waterman score: 3992; 99.1% identity (99.7% similar) in 585 aa overlap (1-585:1-585)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
:::::::::::::::::::::::::::::::::::::::. . .:
XP_011 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSQFVAQAGLKLLGSSNPPTSAS
550 560 570 580 590 600
610
pF1KE0 YTILKPRKAKQIRKKSGG
XP_011 QNIGITGLSHRAWPLTSP
610
>>XP_006718976 (OMIM: 263210,606941,608776) PREDICTED: a (598 aa)
initn: 3979 init1: 3979 opt: 3979 Z-score: 4604.1 bits: 862.0 E(85289): 0
Smith-Waterman score: 3979; 100.0% identity (100.0% similar) in 577 aa overlap (1-577:1-577)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
:::::::::::::::::::::::::::::::::::::
XP_006 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASSFLSDAKNTEKQEEEIRVSIL
550 560 570 580 590
610
pF1KE0 YTILKPRKAKQIRKKSGG
>>XP_016873802 (OMIM: 263210,606941,608776) PREDICTED: a (611 aa)
initn: 2677 init1: 2677 opt: 3917 Z-score: 4532.2 bits: 848.7 E(85289): 0
Smith-Waterman score: 3917; 97.9% identity (98.5% similar) in 585 aa overlap (1-585:1-578)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_016 FFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
:::::::::::::::::::::::::::::::::::::::. . .:
XP_016 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSQFVAQAGLKLLGSSNPPTSAS
540 550 560 570 580 590
610
pF1KE0 YTILKPRKAKQIRKKSGG
XP_016 QNIGITGLSHRAWPLTSP
600 610
>>XP_016873808 (OMIM: 263210,606941,608776) PREDICTED: a (447 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 3558.6 bits: 668.1 E(85289): 1.8e-191
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 447 aa overlap (172-618:1-447)
150 160 170 180 190 200
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
::::::::::::::::::::::::::::::
XP_016 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
10 20 30
210 220 230 240 250 260
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
220 230 240 250 260 270
450 460 470 480 490 500
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
280 290 300 310 320 330
510 520 530 540 550 560
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
340 350 360 370 380 390
570 580 590 600 610
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
400 410 420 430 440
>>NP_001071159 (OMIM: 263210,606941,608776) alpha-1,2-ma (447 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 3558.6 bits: 668.1 E(85289): 1.8e-191
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 447 aa overlap (172-618:1-447)
150 160 170 180 190 200
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
::::::::::::::::::::::::::::::
NP_001 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
10 20 30
210 220 230 240 250 260
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
220 230 240 250 260 270
450 460 470 480 490 500
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
280 290 300 310 320 330
510 520 530 540 550 560
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
340 350 360 370 380 390
570 580 590 600 610
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
400 410 420 430 440
>>XP_016873809 (OMIM: 263210,606941,608776) PREDICTED: a (447 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 3558.6 bits: 668.1 E(85289): 1.8e-191
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 447 aa overlap (172-618:1-447)
150 160 170 180 190 200
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
::::::::::::::::::::::::::::::
XP_016 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
10 20 30
210 220 230 240 250 260
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
220 230 240 250 260 270
450 460 470 480 490 500
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
280 290 300 310 320 330
510 520 530 540 550 560
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
340 350 360 370 380 390
570 580 590 600 610
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
400 410 420 430 440
618 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:48:46 2016 done: Thu Nov 3 15:48:47 2016
Total Scan time: 10.560 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]