FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA1844, 647 aa 1>>>pF1KA1844 647 - 647 aa - 647 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.1937+/-0.00109; mu= -17.4321+/- 0.065 mean_var=359.2244+/-74.503, 0's: 0 Z-trim(113.6): 32 B-trim: 0 in 0/51 Lambda= 0.067669 statistics sampled from 14226 (14245) to 14226 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.438), width: 16 Scan time: 4.420 The best scores are: opt bits E(32554) CCDS7159.1 WAC gene_id:51322|Hs108|chr10 ( 647) 4275 431.4 1.8e-120 CCDS7161.1 WAC gene_id:51322|Hs108|chr10 ( 602) 3955 400.2 4.4e-111 CCDS7160.1 WAC gene_id:51322|Hs108|chr10 ( 544) 2189 227.7 3.2e-59 >>CCDS7159.1 WAC gene_id:51322|Hs108|chr10 (647 aa) initn: 4275 init1: 4275 opt: 4275 Z-score: 2276.1 bits: 431.4 E(32554): 1.8e-120 Smith-Waterman score: 4275; 100.0% identity (100.0% similar) in 647 aa overlap (1-647:1-647) 10 20 30 40 50 60 pF1KA1 MVMYARKQQRLSDGCHDRRGDSQPYQALKYSSKSHPSSGDHRHEKMRDAGDPSPPNKMLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 MVMYARKQQRLSDGCHDRRGDSQPYQALKYSSKSHPSSGDHRHEKMRDAGDPSPPNKMLR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA1 RSDSPENKYSDSTGHSKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSSNPSNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 RSDSPENKYSDSTGHSKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSSNPSNN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA1 PSKTSDAPYDSADDWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 PSKTSDAPYDSADDWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA1 FPKDRDYRREVMQATATSGFASGMEDKHSSDASSLLPQNILSQTSRHNDRDYRLPRAETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 FPKDRDYRREVMQATATSGFASGMEDKHSSDASSLLPQNILSQTSRHNDRDYRLPRAETH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA1 SSSTPVQHPIKPVVHPTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTSSVPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SSSTPVQHPIKPVVHPTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTSSVPA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA1 QKTERKESTSGDKPVSHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 QKTERKESTSGDKPVSHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA1 NLLRQLLPALQATLQLNNSNVDISKINEVLTAAVTQASLQSIIHKFLTAGPSAFNITSLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 NLLRQLLPALQATLQLNNSNVDISKINEVLTAAVTQASLQSIIHKFLTAGPSAFNITSLI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA1 SQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSSQPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSSQPKV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA1 STPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSSNASNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 STPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSSNASNA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA1 TVVPQNSSARSTCSLTPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 TVVPQNSSARSTCSLTPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSE 550 560 570 580 590 600 610 620 630 640 pF1KA1 ICTELKNLRSLVRVCEIQATLREQRILFLRQQIKELEKLKNQNSFMV ::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 ICTELKNLRSLVRVCEIQATLREQRILFLRQQIKELEKLKNQNSFMV 610 620 630 640 >>CCDS7161.1 WAC gene_id:51322|Hs108|chr10 (602 aa) initn: 3955 init1: 3955 opt: 3955 Z-score: 2107.8 bits: 400.2 E(32554): 4.4e-111 Smith-Waterman score: 3955; 100.0% identity (100.0% similar) in 602 aa overlap (46-647:1-602) 20 30 40 50 60 70 pF1KA1 HDRRGDSQPYQALKYSSKSHPSSGDHRHEKMRDAGDPSPPNKMLRRSDSPENKYSDSTGH :::::::::::::::::::::::::::::: CCDS71 MRDAGDPSPPNKMLRRSDSPENKYSDSTGH 10 20 30 80 90 100 110 120 130 pF1KA1 SKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSSNPSNNPSKTSDAPYDSADDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSSNPSNNPSKTSDAPYDSADDW 40 50 60 70 80 90 140 150 160 170 180 190 pF1KA1 SEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNSFPKDRDYRREVMQAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNSFPKDRDYRREVMQAT 100 110 120 130 140 150 200 210 220 230 240 250 pF1KA1 ATSGFASGMEDKHSSDASSLLPQNILSQTSRHNDRDYRLPRAETHSSSTPVQHPIKPVVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 ATSGFASGMEDKHSSDASSLLPQNILSQTSRHNDRDYRLPRAETHSSSTPVQHPIKPVVH 160 170 180 190 200 210 260 270 280 290 300 310 pF1KA1 PTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTSSVPAQKTERKESTSGDKPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 PTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTSSVPAQKTERKESTSGDKPV 220 230 240 250 260 270 320 330 340 350 360 370 pF1KA1 SHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDPNLLRQLLPALQATLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDPNLLRQLLPALQATLQ 280 290 300 310 320 330 380 390 400 410 420 430 pF1KA1 LNNSNVDISKINEVLTAAVTQASLQSIIHKFLTAGPSAFNITSLISQAAQLSTQAQPSNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 LNNSNVDISKINEVLTAAVTQASLQSIIHKFLTAGPSAFNITSLISQAAQLSTQAQPSNQ 340 350 360 370 380 390 440 450 460 470 480 490 pF1KA1 SPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSSQPKVSTPVVKQGPVSQSAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSSQPKVSTPVVKQGPVSQSAT 400 410 420 430 440 450 500 510 520 530 540 550 pF1KA1 QQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSSNASNATVVPQNSSARSTCSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 QQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSSNASNATVVPQNSSARSTCSL 460 470 480 490 500 510 560 570 580 590 600 610 pF1KA1 TPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSEICTELKNLRSLVRVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 TPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSEICTELKNLRSLVRVC 520 530 540 550 560 570 620 630 640 pF1KA1 EIQATLREQRILFLRQQIKELEKLKNQNSFMV :::::::::::::::::::::::::::::::: CCDS71 EIQATLREQRILFLRQQIKELEKLKNQNSFMV 580 590 600 >>CCDS7160.1 WAC gene_id:51322|Hs108|chr10 (544 aa) initn: 2182 init1: 2182 opt: 2189 Z-score: 1176.7 bits: 227.7 E(32554): 3.2e-59 Smith-Waterman score: 3374; 83.9% identity (84.1% similar) in 647 aa overlap (1-647:1-544) 10 20 30 40 50 60 pF1KA1 MVMYARKQQRLSDGCHDRRGDSQPYQALKYSSKSHPSSGDHRHEKMRDAGDPSPPNKMLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 MVMYARKQQRLSDGCHDRRGDSQPYQALKYSSKSHPSSGDHRHEKMRDAGDPSPPNKMLR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA1 RSDSPENKYSDSTGHSKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSSNPSNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 RSDSPENKYSDSTGHSKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSSNPSNN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA1 PSKTSDAPYDSADDWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 PSKTSDAPYDSADDWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA1 FPKDRDYRREVMQATATSGFASGMEDKHSSDASSLLPQNILSQTSRHNDRDYRLPRAETH ::::::::::::::::::::::: CCDS71 FPKDRDYRREVMQATATSGFASG------------------------------------- 190 200 250 260 270 280 290 300 pF1KA1 SSSTPVQHPIKPVVHPTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTSSVPA CCDS71 ------------------------------------------------------------ 310 320 330 340 350 360 pF1KA1 QKTERKESTSGDKPVSHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDP .::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 ------KSTSGDKPVSHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDP 210 220 230 240 250 370 380 390 400 410 420 pF1KA1 NLLRQLLPALQATLQLNNSNVDISKINEVLTAAVTQASLQSIIHKFLTAGPSAFNITSLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 NLLRQLLPALQATLQLNNSNVDISKINEVLTAAVTQASLQSIIHKFLTAGPSAFNITSLI 260 270 280 290 300 310 430 440 450 460 470 480 pF1KA1 SQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSSQPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSSQPKV 320 330 340 350 360 370 490 500 510 520 530 540 pF1KA1 STPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSSNASNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 STPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSSNASNA 380 390 400 410 420 430 550 560 570 580 590 600 pF1KA1 TVVPQNSSARSTCSLTPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 TVVPQNSSARSTCSLTPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSE 440 450 460 470 480 490 610 620 630 640 pF1KA1 ICTELKNLRSLVRVCEIQATLREQRILFLRQQIKELEKLKNQNSFMV ::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 ICTELKNLRSLVRVCEIQATLREQRILFLRQQIKELEKLKNQNSFMV 500 510 520 530 540 647 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:40:11 2016 done: Mon Nov 7 04:40:12 2016 Total Scan time: 4.420 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]