(Linear) (Six-base) MAPSORT of: KIBB7308.seq Check: 489 from: 1 to: 2466 KIBB7308.orf With 182 enzymes: SgfI * March 2, 2010 14:27 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 315 2466 Size: 315 2151 AccI GT'mk_AC Cuts at: 0 1898 2040 2466 Size: 1898 142 426 Fragments arranged by size: 1898 426 142 Acc65I G'GTAC_C Cuts at: 0 1379 2466 Size: 1379 1087 AclI AA'CG_TT Cuts at: 0 931 2466 Size: 931 1535 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 40 853 1139 1307 2244 2413 2466 Size: 40 813 286 168 937 169 53 Fragments arranged by size: 937 813 286 169 168 53 40 AflIII A'CryG_T Cuts at: 0 1535 1774 2225 2466 Size: 1535 239 451 241 Fragments arranged by size: 1535 451 241 239 AhdI GACnn_n'nnGTC Cuts at: 0 1894 2466 Size: 1894 572 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 2082 2466 Size: 2082 384 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 2196 2228 2466 Size: 2196 32 238 Fragments arranged by size: 2196 238 32 AlwNI CAG_nnn'CTG Cuts at: 0 1107 2466 Size: 1107 1359 ApoI r'AATT_y Cuts at: 0 24 88 441 1258 1716 1810 1829 1987 Size: 24 64 353 817 458 94 19 158 Cuts at: 1987 2466 Size: 479 Fragments arranged by size: 817 479 458 353 158 94 64 24 19 AseI AT'TA_AT Cuts at: 0 427 2466 Size: 427 2039 AvaI C'yCGr_G Cuts at: 0 2023 2466 Size: 2023 443 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 1371 1404 2466 Size: 1371 33 1062 Fragments arranged by size: 1371 1062 33 BanI G'GyrC_C Cuts at: 0 1379 2466 Size: 1379 1087 BanII G_rGCy'C Cuts at: 0 1321 2441 2466 Size: 1321 1120 25 Fragments arranged by size: 1321 1120 25 BbsI GAAGACnn'nnnn_ Cuts at: 0 262 2466 Size: 262 2204 BciVI GTATCCnnnnn_n' Cuts at: 0 210 2320 2466 Size: 210 2110 146 Fragments arranged by size: 2110 210 146 BclI T'GATC_A Cuts at: 0 374 1845 2466 Size: 374 1471 621 Fragments arranged by size: 1471 621 374 BfrBI ATG'CAT Cuts at: 0 127 2466 Size: 127 2339 BglII A'GATC_T Cuts at: 0 1785 2466 Size: 1785 681 BlpI GC'TnA_GC Cuts at: 0 1060 2466 Size: 1060 1406 Bme1580I G_kGCm'C Cuts at: 0 576 1555 1741 2466 Size: 576 979 186 725 Fragments arranged by size: 979 725 576 186 BmgBI CAC'GTC Cuts at: 0 2226 2466 Size: 2226 240 BmrI ACTGGGnnnn_n' Cuts at: 0 66 1324 1565 1714 2466 Size: 66 1258 241 149 752 Fragments arranged by size: 1258 752 241 149 66 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1175 2466 Size: 1175 1291 Bpu10I CC'TnA_GC Cuts at: 0 2265 2466 Size: 2265 201 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1394 1819 2466 Size: 1394 425 647 Fragments arranged by size: 1394 647 425 BsaI GGTCTCn'nnnn_ Cuts at: 0 1304 2248 2466 Size: 1304 944 218 Fragments arranged by size: 1304 944 218 BsaBI GATnn'nnATC Cuts at: 0 1345 2466 Size: 1345 1121 BsaWI w'CCGG_w Cuts at: 0 2184 2330 2466 Size: 2184 146 136 Fragments arranged by size: 2184 146 136 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 2196 2226 2466 Size: 2196 30 240 Fragments arranged by size: 2196 240 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 994 1518 2466 Size: 994 524 948 Fragments arranged by size: 994 948 524 BseYI C'CCAG_C Cuts at: 0 2345 2466 Size: 2345 121 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1295 2466 Size: 1295 1171 BsiHKAI G_wGCw'C Cuts at: 0 2441 2466 Size: 2441 25 Bsp1286I G_dGCh'C Cuts at: 0 576 1321 1555 1741 2441 2466 Size: 576 745 234 186 700 25 Fragments arranged by size: 745 700 576 234 186 25 BspHI T'CATG_A Cuts at: 0 1677 2375 2466 Size: 1677 698 91 Fragments arranged by size: 1677 698 91 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 315 2466 Size: 315 2151 BstAPI GCAn_nnn'nTGC Cuts at: 0 1161 2466 Size: 1161 1305 BstEII G'GTnAC_C Cuts at: 0 381 2466 Size: 381 2085 BstYI r'GATC_y Cuts at: 0 762 1785 2466 Size: 762 1023 681 Fragments arranged by size: 1023 762 681 BstZ17I GTA'TAC Cuts at: 0 2041 2466 Size: 2041 425 Bsu36I CC'TnA_GG Cuts at: 0 1652 1793 2466 Size: 1652 141 673 Fragments arranged by size: 1652 673 141 BtgI C'CryG_G Cuts at: 0 1383 2466 Size: 1383 1083 BtsI GCAGTG_nn' Cuts at: 0 44 2466 Size: 44 2422 ClaI AT'CG_AT Cuts at: 0 1542 2466 Size: 1542 924 DraI TTT'AAA Cuts at: 0 971 2466 Size: 971 1495 EarI CTCTTCn'nnn_ Cuts at: 0 997 1326 2466 Size: 997 329 1140 Fragments arranged by size: 1140 997 329 EcoICRI GAG'CTC Cuts at: 0 2439 2466 Size: 2439 27 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 40 853 1139 1175 1307 2244 2413 2466 Size: 40 813 286 36 132 937 169 53 Fragments arranged by size: 937 813 286 169 132 53 40 36 EcoO109I rG'GnC_Cy Cuts at: 0 2049 2466 Size: 2049 417 EcoRI G'AATT_C Cuts at: 0 24 441 2466 Size: 24 417 2025 Fragments arranged by size: 2025 417 24 EcoRV GAT'ATC Cuts at: 0 603 2466 Size: 603 1863 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 1804 2466 Size: 1804 662 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 262 294 684 716 1024 1056 1204 1236 Size: 262 32 390 32 308 32 148 32 Cuts at: 1236 1237 1269 1327 1359 1499 1531 1659 1691 Size: 1 32 58 32 140 32 128 32 Cuts at: 1691 1880 1912 2325 2357 2466 Size: 189 32 413 32 109 Fragments arranged by size: 413 390 308 262 189 148 140 128 109 58 32 32 32 32 32 32 32 32 32 32 1 HindIII A'AGCT_T Cuts at: 0 467 2466 Size: 467 1999 KpnI G_GTAC'C Cuts at: 0 1383 2466 Size: 1383 1083 MfeI C'AATT_G Cuts at: 0 1280 2466 Size: 1280 1186 MslI CAynn'nnrTG Cuts at: 0 304 1682 1906 2466 Size: 304 1378 224 560 Fragments arranged by size: 1378 560 304 224 MspA1I CmG'CkG Cuts at: 0 1107 2466 Size: 1107 1359 NcoI C'CATG_G Cuts at: 0 1383 2466 Size: 1383 1083 NdeI CA'TA_TG Cuts at: 0 536 2466 Size: 536 1930 NsiI A_TGCA'T Cuts at: 0 129 2466 Size: 129 2337 NspI r_CATG'y Cuts at: 0 265 1539 1778 2466 Size: 265 1274 239 688 Fragments arranged by size: 1274 688 265 239 PciI A'CATG_T Cuts at: 0 1535 1774 2466 Size: 1535 239 692 Fragments arranged by size: 1535 692 239 PflMI CCAn_nnn'nTGG Cuts at: 0 209 2174 2466 Size: 209 1965 292 Fragments arranged by size: 1965 292 209 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1955 1987 2196 2228 2466 Size: 1955 32 209 32 238 Fragments arranged by size: 1955 238 209 32 32 PpuMI rG'GwC_Cy Cuts at: 0 2049 2466 Size: 2049 417 PsiI TTA'TAA Cuts at: 0 2396 2466 Size: 2396 70 PvuII CAG'CTG Cuts at: 0 1107 2466 Size: 1107 1359 SacI G_AGCT'C Cuts at: 0 2441 2466 Size: 2441 25 SapI GCTCTTCn'nnn_ Cuts at: 0 1326 2466 Size: 1326 1140 ScaI AGT'ACT Cuts at: 0 171 2466 Size: 171 2295 SexAI A'CCwGG_T Cuts at: 0 1464 2466 Size: 1464 1002 SfcI C'TryA_G Cuts at: 0 417 2466 Size: 417 2049 SmlI C'TyrA_G Cuts at: 0 1409 1834 2023 2466 Size: 1409 425 189 443 Fragments arranged by size: 1409 443 425 189 SspI AAT'ATT Cuts at: 0 1857 2466 Size: 1857 609 StyI C'CwwG_G Cuts at: 0 500 1383 2466 Size: 500 883 1083 Fragments arranged by size: 1083 883 500 TatI w'GTAC_w Cuts at: 0 169 769 2466 Size: 169 600 1697 Fragments arranged by size: 1697 600 169 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1452 1484 2466 Size: 1452 32 982 Fragments arranged by size: 1452 982 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 393 2466 Size: 393 2073 XhoI C'TCGA_G Cuts at: 0 2023 2466 Size: 2023 443 XmnI GAAnn'nnTTC Cuts at: 0 866 1268 1787 2466 Size: 866 402 519 679 Fragments arranged by size: 866 679 519 402 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AflIII AhdI AlfI AloI AlwNI ApoI AseI AvaI BaeI BanI BanII BbsI BciVI BclI BfrBI BglII BlpI Bme1580I BmgBI BmrI BpmI Bpu10I BpuEI BsaI BsaBI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI Bsp1286I BspHI BspMI BstAPI BstEII BstYI BstZ17I Bsu36I BtgI BtsI ClaI DraI EarI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI Hin4I HindIII KpnI MfeI MslI MspA1I NcoI NdeI NsiI NspI PciI PflMI PpiI PpuMI PsiI PvuII SacI SapI ScaI SexAI SfcI SmlI SspI StyI TatI TstI XcmI XhoI XmnI Enzymes that do not cut: AatII AfeI AflII AgeI AleI ApaI ApaLI AscI AsiSI AvrII BamHI BbeI BbvCI BcgI BglI BmtI BplI BsaAI BsaHI BsiEI BsiWI BsmI BsmBI BspEI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstBI BstXI BtgZI CspCI DraIII DrdI EaeI EagI EciI EcoNI FseI FspI FspAI HaeII HincII HpaI KasI MluI MmeI MscI NaeI NarI NgoMIV NheI NotI NruI PacI PasI PfoI PmeI PmlI PshAI PspOMI PspXI PsrI PstI PvuI RsrII SacII SalI SanDI SbfI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI StuI SwaI TaqII Tth111I XbaI XmaI ZraI