Result of FASTA (omim) for
pFN21AE0755
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0755, 329 aa
1>>>pF1KE0755 329 - 329 aa - 329 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3574+/-0.000315; mu= 16.6142+/- 0.020
mean_var=76.5292+/-15.308, 0's: 0 Z-trim(117.8): 22 B-trim: 0 in 0/56
Lambda= 0.146609
statistics sampled from 30040 (30062) to 30040 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.352), width: 16
Scan time: 8.550
The best scores are: opt bits E(85289)
NP_001138347 (OMIM: 611435) docking protein 3 isof ( 330) 2241 483.0 3.8e-136
XP_005266044 (OMIM: 611435) PREDICTED: docking pro ( 330) 2241 483.0 3.8e-136
XP_011532958 (OMIM: 611435) PREDICTED: docking pro ( 440) 1487 323.6 4.8e-88
XP_005266042 (OMIM: 611435) PREDICTED: docking pro ( 440) 1487 323.6 4.8e-88
NP_001295165 (OMIM: 611435) docking protein 3 isof ( 440) 1487 323.6 4.8e-88
XP_011532957 (OMIM: 611435) PREDICTED: docking pro ( 440) 1487 323.6 4.8e-88
NP_001295164 (OMIM: 611435) docking protein 3 isof ( 440) 1487 323.6 4.8e-88
XP_011532956 (OMIM: 611435) PREDICTED: docking pro ( 440) 1487 323.6 4.8e-88
NP_079148 (OMIM: 611435) docking protein 3 isoform ( 496) 1487 323.6 5.3e-88
NP_001138348 (OMIM: 611435) docking protein 3 isof ( 228) 1364 297.4 1.9e-80
XP_016865373 (OMIM: 611435) PREDICTED: docking pro ( 285) 1364 297.4 2.3e-80
XP_011532959 (OMIM: 611435) PREDICTED: docking pro ( 338) 610 138.0 2.7e-32
XP_016865372 (OMIM: 611435) PREDICTED: docking pro ( 395) 610 138.1 3.1e-32
NP_001372 (OMIM: 602919) docking protein 1 isoform ( 481) 504 115.7 2e-25
NP_003965 (OMIM: 604997) docking protein 2 isoform ( 412) 485 111.6 2.9e-24
NP_001305796 (OMIM: 602919) docking protein 1 isof ( 470) 461 106.6 1.1e-22
NP_001305797 (OMIM: 602919) docking protein 1 isof ( 177) 358 84.5 1.8e-16
XP_005273737 (OMIM: 604997) PREDICTED: docking pro ( 318) 212 53.8 5.7e-07
NP_001184189 (OMIM: 602919) docking protein 1 isof ( 342) 188 48.8 2e-05
NP_001305795 (OMIM: 602919) docking protein 1 isof ( 342) 188 48.8 2e-05
NP_001304729 (OMIM: 604997) docking protein 2 isof ( 258) 160 42.7 0.00098
NP_958728 (OMIM: 604997) docking protein 2 isoform ( 258) 160 42.7 0.00098
>>NP_001138347 (OMIM: 611435) docking protein 3 isoform (330 aa)
initn: 1957 init1: 1957 opt: 2241 Z-score: 2565.3 bits: 483.0 E(85289): 3.8e-136
Smith-Waterman score: 2241; 99.4% identity (99.4% similar) in 330 aa overlap (1-329:1-330)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
190 200 210 220 230 240
250 260 270 280 290
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSL-CSCSWRHPRSQ
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLLCSCSWRHPRSQ
250 260 270 280 290 300
300 310 320
pF1KE0 PCTQASCLQGSDCPAPHRNSTSAAHTLGTS
: ::::::::::::::::::::::::::::
NP_001 PRTQASCLQGSDCPAPHRNSTSAAHTLGTS
310 320 330
>>XP_005266044 (OMIM: 611435) PREDICTED: docking protein (330 aa)
initn: 1957 init1: 1957 opt: 2241 Z-score: 2565.3 bits: 483.0 E(85289): 3.8e-136
Smith-Waterman score: 2241; 99.4% identity (99.4% similar) in 330 aa overlap (1-329:1-330)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
190 200 210 220 230 240
250 260 270 280 290
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSL-CSCSWRHPRSQ
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_005 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLLCSCSWRHPRSQ
250 260 270 280 290 300
300 310 320
pF1KE0 PCTQASCLQGSDCPAPHRNSTSAAHTLGTS
: ::::::::::::::::::::::::::::
XP_005 PRTQASCLQGSDCPAPHRNSTSAAHTLGTS
310 320 330
>>XP_011532958 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1701.7 bits: 323.6 E(85289): 4.8e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
:::::::::::::::::::::::::::::::::::
XP_011 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
XP_011 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
250 260 270 280 290 300
>>XP_005266042 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1701.7 bits: 323.6 E(85289): 4.8e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
:::::::::::::::::::::::::::::::::::
XP_005 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
XP_005 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
250 260 270 280 290 300
>>NP_001295165 (OMIM: 611435) docking protein 3 isoform (440 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1701.7 bits: 323.6 E(85289): 4.8e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
:::::::::::::::::::::::::::::::::::
NP_001 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
NP_001 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
250 260 270 280 290 300
>>XP_011532957 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1701.7 bits: 323.6 E(85289): 4.8e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
:::::::::::::::::::::::::::::::::::
XP_011 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
XP_011 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
250 260 270 280 290 300
>>NP_001295164 (OMIM: 611435) docking protein 3 isoform (440 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1701.7 bits: 323.6 E(85289): 4.8e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
:::::::::::::::::::::::::::::::::::
NP_001 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
NP_001 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
250 260 270 280 290 300
>>XP_011532956 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1701.7 bits: 323.6 E(85289): 4.8e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGPGRRGERRVIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKILLGTPGVSLLICKGERTDDVSGII
:::::::::::::::::::::::::::::::::::
XP_011 LLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQGERSFLKTSMLRSLCSCSWRHPRSQP
XP_011 PDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPTSRKMH
250 260 270 280 290 300
>>NP_079148 (OMIM: 611435) docking protein 3 isoform 1 [ (496 aa)
initn: 1534 init1: 1487 opt: 1487 Z-score: 1700.9 bits: 323.6 E(85289): 5.3e-88
Smith-Waterman score: 1487; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:57-271)
10 20 30
pF1KE0 MDPLETPIKDGILYQQHVKFGKKCWRKVWA
::::::::::::::::::::::::::::::
NP_079 GQKGKCEEFPSSLSSVSPGLEAAALLLAVTMDPLETPIKDGILYQQHVKFGKKCWRKVWA
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 LLYAGGPSGVARLESWEVRDGGLGAAGDRSAGPGRRGERRVIRLADCVSVLPADGESCPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 LLYAGGPSGVARLESWEVRDGGLGAAGDRSAGPGRRGERRVIRLADCVSVLPADGESCPR
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 DTGAFLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPKRGLVPMEENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DTGAFLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPKRGLVPMEENS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 IYSSWQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 IYSSWQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRK
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE0 FGSDKILLGTPGVSLLICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLRE
:::::
NP_079 FGSDKGVFSFEAGRRCHSGEGLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLP
270 280 290 300 310 320
>>NP_001138348 (OMIM: 611435) docking protein 3 isoform (228 aa)
initn: 1219 init1: 1080 opt: 1364 Z-score: 1565.1 bits: 297.4 E(85289): 1.9e-80
Smith-Waterman score: 1364; 99.0% identity (99.0% similar) in 206 aa overlap (125-329:23-228)
100 110 120 130 140 150
pF1KE0 FLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSS
::::::::::::::::::::::::::::::
NP_001 MDPLETPIKDGILYQQHVKFGKGTGEASSGSTDAQSPKRGLVPMEENSIYSS
10 20 30 40 50
160 170 180 190 200 210
pF1KE0 WQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRKFGSD
60 70 80 90 100 110
220 230 240 250 260 270
pF1KE0 KILLGTPGVSLLICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KILLGTPGVSLLICKGERTDDVSGIILDESLLRAYSVPGAGGHSRVQDSLGPVLREPTFQ
120 130 140 150 160 170
280 290 300 310 320
pF1KE0 GERSFLKTSMLRSL-CSCSWRHPRSQPCTQASCLQGSDCPAPHRNSTSAAHTLGTS
:::::::::::::: :::::::::::: ::::::::::::::::::::::::::::
NP_001 GERSFLKTSMLRSLLCSCSWRHPRSQPRTQASCLQGSDCPAPHRNSTSAAHTLGTS
180 190 200 210 220
329 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:35:03 2016 done: Sat Nov 5 18:35:04 2016
Total Scan time: 8.550 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]