Result of FASTA (ccds) for
pFN21AB0936
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0936, 386 aa
1>>>pF1KB0936 386 - 386 aa - 386 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8846+/-0.000871; mu= 19.1204+/- 0.053
mean_var=62.7089+/-12.626, 0's: 0 Z-trim(105.5): 20 B-trim: 0 in 0/50
Lambda= 0.161961
statistics sampled from 8456 (8467) to 8456 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.26), width: 16
Scan time: 2.910
The best scores are: opt bits E(32554)
CCDS44845.1 BCAT1 gene_id:586|Hs108|chr12 ( 386) 2634 624.2 6.3e-179
CCDS53761.1 BCAT1 gene_id:586|Hs108|chr12 ( 398) 2623 621.6 3.8e-178
CCDS53760.1 BCAT1 gene_id:586|Hs108|chr12 ( 385) 2621 621.1 5.1e-178
CCDS53762.1 BCAT1 gene_id:586|Hs108|chr12 ( 325) 1759 419.7 1.9e-117
CCDS53763.1 BCAT1 gene_id:586|Hs108|chr12 ( 349) 1759 419.7 2e-117
CCDS12735.1 BCAT2 gene_id:587|Hs108|chr19 ( 392) 1537 367.8 9.2e-102
CCDS74416.1 BCAT2 gene_id:587|Hs108|chr19 ( 352) 1514 362.4 3.5e-100
CCDS54290.1 BCAT2 gene_id:587|Hs108|chr19 ( 300) 1285 308.9 3.9e-84
>>CCDS44845.1 BCAT1 gene_id:586|Hs108|chr12 (386 aa)
initn: 2634 init1: 2634 opt: 2634 Z-score: 3325.8 bits: 624.2 E(32554): 6.3e-179
Smith-Waterman score: 2634; 100.0% identity (100.0% similar) in 386 aa overlap (1-386:1-386)
10 20 30 40 50 60
pF1KB0 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 YRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
310 320 330 340 350 360
370 380
pF1KB0 LASRILSKLTDIQYGREESDWTIVLS
::::::::::::::::::::::::::
CCDS44 LASRILSKLTDIQYGREESDWTIVLS
370 380
>>CCDS53761.1 BCAT1 gene_id:586|Hs108|chr12 (398 aa)
initn: 2623 init1: 2623 opt: 2623 Z-score: 3311.8 bits: 621.6 E(32554): 3.8e-178
Smith-Waterman score: 2623; 99.7% identity (100.0% similar) in 385 aa overlap (2-386:14-398)
10 20 30 40
pF1KB0 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLV
.::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MASPLRSAAALARQDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB0 FGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB0 RLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB0 TEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB0 SSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPG
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB0 VTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGE
310 320 330 340 350 360
350 360 370 380
pF1KB0 TIHIPTMENGPKLASRILSKLTDIQYGREESDWTIVLS
::::::::::::::::::::::::::::::::::::::
CCDS53 TIHIPTMENGPKLASRILSKLTDIQYGREESDWTIVLS
370 380 390
>>CCDS53760.1 BCAT1 gene_id:586|Hs108|chr12 (385 aa)
initn: 2621 init1: 2621 opt: 2621 Z-score: 3309.4 bits: 621.1 E(32554): 5.1e-178
Smith-Waterman score: 2621; 100.0% identity (100.0% similar) in 384 aa overlap (3-386:2-385)
10 20 30 40 50 60
pF1KB0 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 YRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 YRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB0 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB0 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB0 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
300 310 320 330 340 350
370 380
pF1KB0 LASRILSKLTDIQYGREESDWTIVLS
::::::::::::::::::::::::::
CCDS53 LASRILSKLTDIQYGREESDWTIVLS
360 370 380
>>CCDS53762.1 BCAT1 gene_id:586|Hs108|chr12 (325 aa)
initn: 1759 init1: 1759 opt: 1759 Z-score: 2221.9 bits: 419.7 E(32554): 1.9e-117
Smith-Waterman score: 2127; 89.8% identity (89.8% similar) in 361 aa overlap (26-386:2-325)
10 20 30 40 50 60
pF1KB0 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
:::::::::::::::::::::::::::::::::::
CCDS53 MKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
10 20 30
70 80 90 100 110 120
pF1KB0 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRM
:::::::::::::::::::::::::::::::::
CCDS53 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVE---------------------------
40 50 60
130 140 150 160 170 180
pF1KB0 YRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ----------VFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
70 80 90 100 110
190 200 210 220 230 240
pF1KB0 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
120 130 140 150 160 170
250 260 270 280 290 300
pF1KB0 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
180 190 200 210 220 230
310 320 330 340 350 360
pF1KB0 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
240 250 260 270 280 290
370 380
pF1KB0 LASRILSKLTDIQYGREESDWTIVLS
::::::::::::::::::::::::::
CCDS53 LASRILSKLTDIQYGREESDWTIVLS
300 310 320
>>CCDS53763.1 BCAT1 gene_id:586|Hs108|chr12 (349 aa)
initn: 1759 init1: 1759 opt: 1759 Z-score: 2221.5 bits: 419.7 E(32554): 2e-117
Smith-Waterman score: 2306; 90.4% identity (90.4% similar) in 386 aa overlap (1-386:1-349)
10 20 30 40 50 60
pF1KB0 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRM
:::::::::::::::::::::::::::::::::
CCDS53 EWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVE---------------------------
70 80 90
130 140 150 160 170 180
pF1KB0 YRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ----------VFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTK
100 110 120 130 140
190 200 210 220 230 240
pF1KB0 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDN
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB0 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQ
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB0 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 WGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPK
270 280 290 300 310 320
370 380
pF1KB0 LASRILSKLTDIQYGREESDWTIVLS
::::::::::::::::::::::::::
CCDS53 LASRILSKLTDIQYGREESDWTIVLS
330 340
>>CCDS12735.1 BCAT2 gene_id:587|Hs108|chr19 (392 aa)
initn: 1427 init1: 1427 opt: 1537 Z-score: 1940.5 bits: 367.8 E(32554): 9.2e-102
Smith-Waterman score: 1537; 58.6% identity (83.7% similar) in 367 aa overlap (16-381:23-388)
10 20 30 40 50
pF1KB0 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNN-LVFGTV
: . . ..::: :: . . ..:: :.. :::: .
CCDS12 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 FTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQ
:::::: :::... :: .:.:.:.:::.:::.::.:::...::::.:::.: :...:::.
CCDS12 FTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFR
70 80 90 100 110
120 130 140 150 160 170
pF1KB0 PNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPS
: :::::: :::.: :: ::: ::::::..:...:..::: ....:::.::..::.:::
CCDS12 PWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB0 LGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLF
:::..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::: ...
CCDS12 LGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB0 AQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRR
.: ::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::::.:.
CCDS12 VQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB0 CILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHI
.::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: :::: ...::
CCDS12 SLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI
300 310 320 330 340 350
360 370 380
pF1KB0 PTMENGPKLASRILSKLTDIQYGREESDWTIVLS
:::::::.: :. ..: .:::: . .:
CCDS12 PTMENGPELILRFQKELKEIQYGIRAHEWMFPV
360 370 380 390
>>CCDS74416.1 BCAT2 gene_id:587|Hs108|chr19 (352 aa)
initn: 1487 init1: 1406 opt: 1514 Z-score: 1912.1 bits: 362.4 E(32554): 3.5e-100
Smith-Waterman score: 1514; 60.9% identity (85.7% similar) in 343 aa overlap (40-381:7-348)
10 20 30 40 50 60
pF1KB0 AECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNN-LVFGTVFTDHMLTVEWSSEFGW
.:: :.. :::: .:::::: :::... ::
CCDS74 MTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDK-GW
10 20 30
70 80 90 100 110 120
pF1KB0 EKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRAT
.:.:.:.:::.:::.::.:::...::::.:::.: :...:::.: :::::: :::.:
CCDS74 GQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLC
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB0 LPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLS
:: ::: ::::::..:...:..::: ....:::.::..::.::::::..::.:::::.:
CCDS74 LPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILC
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB0 PVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWL
::: :: .:. .:::: :.: ..::: ::.:. :.::::: ....: ::. ::.:::::
CCDS74 PVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB0 YGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSE
:: :::.:::::::.:.:: .::: ::.::::.:.:::::.:. .::.:. ::::.: :
CCDS74 YGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVE
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB0 RYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSK
: .:: .: ::: .::::.::::::: :::: :::: ...:::::::::.: :. ..
CCDS74 RTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKE
280 290 300 310 320 330
370 380
pF1KB0 LTDIQYGREESDWTIVLS
: .:::: . .:
CCDS74 LKEIQYGIRAHEWMFPV
340 350
>>CCDS54290.1 BCAT2 gene_id:587|Hs108|chr19 (300 aa)
initn: 1274 init1: 1274 opt: 1285 Z-score: 1623.9 bits: 308.9 E(32554): 3.9e-84
Smith-Waterman score: 1285; 61.2% identity (85.1% similar) in 289 aa overlap (93-381:8-296)
70 80 90 100 110 120
pF1KB0 SSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYR
.::::.:::.: :...:::.: :::::: :
CCDS54 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLR
10 20 30
130 140 150 160 170 180
pF1KB0 SAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKAL
::.: :: ::: ::::::..:...:..::: ....:::.::..::.::::::..::.::
CCDS54 SAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRAL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB0 LFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGC
:::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::: ....: ::. ::
CCDS54 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGC
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB0 QQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWG
.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::::.:. .::.:. ::
CCDS54 EQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWG
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB0 EFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLA
::.: :: .:: .: ::: .::::.::::::: :::: :::: ...:::::::::.:
CCDS54 EFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELI
220 230 240 250 260 270
370 380
pF1KB0 SRILSKLTDIQYGREESDWTIVLS
:. ..: .:::: . .:
CCDS54 LRFQKELKEIQYGIRAHEWMFPV
280 290 300
386 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:52:21 2016 done: Sat Nov 5 17:52:21 2016
Total Scan time: 2.910 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]