Result of FASTA (omim) for
pFN21AB6633
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6633, 417 aa
1>>>pF1KB6633 417 - 417 aa - 417 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0817+/-0.000313; mu= 10.5733+/- 0.020
mean_var=142.1988+/-29.380, 0's: 0 Z-trim(120.6): 18 B-trim: 1527 in 1/61
Lambda= 0.107554
statistics sampled from 35949 (35969) to 35949 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.422), width: 16
Scan time: 9.150
The best scores are: opt bits E(85289)
NP_002308 (OMIM: 153455,617168) protein-lysine 6-o ( 417) 2970 472.1 1.2e-132
NP_001171573 (OMIM: 153455,617168) protein-lysine ( 187) 1351 220.6 2.7e-57
NP_005567 (OMIM: 153456,177650) lysyl oxidase homo ( 574) 1211 199.2 2.2e-50
XP_016877668 (OMIM: 153456,177650) PREDICTED: lysy ( 225) 1160 191.0 2.6e-48
NP_001304002 (OMIM: 153455,617168) protein-lysine ( 120) 860 144.2 1.6e-34
XP_016860601 (OMIM: 607163) PREDICTED: lysyl oxida ( 392) 775 131.4 3.7e-30
NP_001276094 (OMIM: 607163) lysyl oxidase homolog ( 392) 775 131.4 3.7e-30
NP_001276093 (OMIM: 607163) lysyl oxidase homolog ( 608) 775 131.6 5.2e-30
NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 i ( 753) 775 131.7 6.2e-30
XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxida ( 753) 775 131.7 6.2e-30
NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 p ( 756) 765 130.1 1.8e-29
XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 765 130.1 1.8e-29
XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 765 130.1 1.8e-29
NP_002309 (OMIM: 606663) lysyl oxidase homolog 2 p ( 774) 761 129.5 2.8e-29
XP_011519857 (OMIM: 153456,177650) PREDICTED: lysy ( 445) 228 46.6 0.00015
>>NP_002308 (OMIM: 153455,617168) protein-lysine 6-oxida (417 aa)
initn: 2970 init1: 2970 opt: 2970 Z-score: 2502.7 bits: 472.1 E(85289): 1.2e-132
Smith-Waterman score: 2970; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KB6 MRFAWTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MRFAWTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GSQYQPQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GSQYQPQRRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYSDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 FSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADID
310 320 330 340 350 360
370 380 390 400 410
pF1KB6 CQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
370 380 390 400 410
>>NP_001171573 (OMIM: 153455,617168) protein-lysine 6-ox (187 aa)
initn: 1351 init1: 1351 opt: 1351 Z-score: 1149.7 bits: 220.6 E(85289): 2.7e-57
Smith-Waterman score: 1351; 100.0% identity (100.0% similar) in 187 aa overlap (231-417:1-187)
210 220 230 240 250 260
pF1KB6 PGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHR
::::::::::::::::::::::::::::::
NP_001 MSMYNLRCAAEENCLASTAYRADVRDYDHR
10 20 30
270 280 290 300 310 320
pF1KB6 VLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHK
40 50 60 70 80 90
330 340 350 360 370 380
pF1KB6 ASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSV
100 110 120 130 140 150
390 400 410
pF1KB6 NPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
:::::::::::::::::::::::::::::::::::::
NP_001 NPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
160 170 180
>>NP_005567 (OMIM: 153456,177650) lysyl oxidase homolog (574 aa)
initn: 1374 init1: 1168 opt: 1211 Z-score: 1025.7 bits: 199.2 E(85289): 2.2e-50
Smith-Waterman score: 1211; 64.4% identity (80.7% similar) in 270 aa overlap (149-414:308-571)
120 130 140 150 160 170
pF1KB6 PTARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDG--MVGDDPYNPYK
: : .: :: .. : . . :: : .
NP_005 LYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYAN--PPPEAYGPPRALEPPYLPVR
280 290 300 310 320 330
180 190 200 210 220 230
pF1KB6 YSDDNPYYNYYDTYERPR--PGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMY
:: : . . .. : :. :::. . :::::: :: :.:::::::. .:
NP_005 SSDTPPPGGERNGAQQGRLSVGSVYRPNQNG----RGLPDLVPDPNYVQASTYVQRAHLY
340 350 360 370 380 390
240 250 260 270 280 290
pF1KB6 NLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQH
.:::::::.::::::: .. ::: :::::::::::::::.::::.:::..:::::::::
NP_005 SLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQH
400 410 420 430 440 450
300 310 320 330 340 350
pF1KB6 YHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDT
::::::::::::::: : ..:::::::::::::..::.: .:.:::.::::::::::::
NP_005 YHSMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDT
460 470 480 490 500 510
360 370 380 390 400 410
pF1KB6 YGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTI
:.:::::::::::::.:::::::: :::.:.: :::.:::::::.:.:::... :..: :
NP_005 YNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKI
520 530 540 550 560 570
pF1KB6 SPY
NP_005 VQS
>--
initn: 228 init1: 151 opt: 234 Z-score: 206.4 bits: 47.6 E(85289): 9.3e-05
Smith-Waterman score: 234; 31.4% identity (50.2% similar) in 207 aa overlap (15-206:19-213)
10 20 30 40 50
pF1KB6 MRFAWTVLLLGPLQLCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFS
::.::: ::: : . . :. ::: :::::::::.:
NP_005 MALARGSRQLGALVWGACLCVLVH------GQQAQPGQG-SDPARWRQLIQWENNGQVYS
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 LLSLGSQYQPQ--RRRDPGAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTA
::. ::.: : .: . .. : :. .::: :. : : : : .
NP_005 LLNSGSEYVPAGPQRSESSSRVLLAGAPQAQQRRSHG---SPRRRQAPSLPLPGRVG--S
60 70 80 90 100
120 130 140 150 160
pF1KB6 GRPRPTARHWFQAGYSTSRAREA------GASRAENQTAPGEVPALSNLRPPSRVDGMVG
: ::: : : . ::. : .::..... . . .. : .
NP_005 DTVRGQARHPFGFGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYR
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB6 DDPYNPYKYS-DDNPYYNYYDTYE---RPRPGG--RYRP-GYGTGYFQYGLPDLVADPYY
..: : .. . :. . :..:. : : ::: : :.:
NP_005 QQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPY
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 IQASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSR
NP_005 QPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQ
230 240 250 260 270 280
>>XP_016877668 (OMIM: 153456,177650) PREDICTED: lysyl ox (225 aa)
initn: 1184 init1: 1160 opt: 1160 Z-score: 988.5 bits: 191.0 E(85289): 2.6e-48
Smith-Waterman score: 1160; 76.8% identity (92.1% similar) in 203 aa overlap (212-414:20-222)
190 200 210 220 230 240
pF1KB6 PYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAAE
::::: :: :.:::::::. .:.::::::
XP_016 MSKLFQEVLAAPTPQSSRCLPDLVPDPNYVQASTYVQRAHLYSLRCAAE
10 20 30 40
250 260 270 280 290 300
pF1KB6 ENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEF
:.::::::: .. ::: :::::::::::::::.::::.:::..::::::::::::::::
XP_016 EKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEF
50 60 70 80 90 100
310 320 330 340 350 360
pF1KB6 SHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDC
:::::::: : ..:::::::::::::..::.: .:.:::.:::::::::::::.:::::
XP_016 SHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDC
110 120 130 140 150 160
370 380 390 400 410
pF1KB6 QWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
::::::::.:::::::: :::.:.: :::.:::::::.:.:::... :..: :
XP_016 QWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
170 180 190 200 210 220
>>NP_001304002 (OMIM: 153455,617168) protein-lysine 6-ox (120 aa)
initn: 860 init1: 860 opt: 860 Z-score: 740.6 bits: 144.2 E(85289): 1.6e-34
Smith-Waterman score: 860; 100.0% identity (100.0% similar) in 120 aa overlap (298-417:1-120)
270 280 290 300 310 320
pF1KB6 RVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLED
::::::::::::::::::::::::::::::
NP_001 MDEFSHYDLLDANTQRRVAEGHKASFCLED
10 20 30
330 340 350 360 370 380
pF1KB6 TSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVP
40 50 60 70 80 90
390 400 410
pF1KB6 ESDYTNNVVRCDIRYTGHHAYASGCTISPY
::::::::::::::::::::::::::::::
NP_001 ESDYTNNVVRCDIRYTGHHAYASGCTISPY
100 110 120
>>XP_016860601 (OMIM: 607163) PREDICTED: lysyl oxidase h (392 aa)
initn: 725 init1: 528 opt: 775 Z-score: 662.3 bits: 131.4 E(85289): 3.7e-30
Smith-Waterman score: 775; 49.5% identity (68.9% similar) in 222 aa overlap (194-414:152-368)
170 180 190 200 210 220
pF1KB6 DGMVGDDPYNPYKYSDDNPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQ
: : :. : . ::. .:
XP_016 TEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGTRFTAGV---ICSETASDLLLHSALVQ
130 140 150 160 170
230 240 250 260 270 280
pF1KB6 ASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPR
..:.. .. : ::::::::::.: :. : :: :::: ....: : .:: :. :
XP_016 ETAYIEDRPLHMLYCAAEENCLASSARSANW-PYGHRRLLRFSSQIHNLGRADFRPKAGR
180 190 200 210 220 230
290 300 310 320 330 340
pF1KB6 YSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAH
.:: :: :: :::::: :.:::.: : . :::::::::::::: :. .:. :.
XP_016 HSWVWHECHGHYHSMDIFTHYDILTPNGTK-VAEGHKASFCLEDTECQEDVSKRYECANF
240 250 260 270 280 290
350 360 370 380 390 400
pF1KB6 -TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRY
::.. ::.: : :::::::::::::::::::.: .::.. : :::.:::...:. .:
XP_016 GEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKY
300 310 320 330 340 350
410
pF1KB6 TGHHAYASGCTISPY
::. .. .: :
XP_016 DGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
360 370 380 390
>>NP_001276094 (OMIM: 607163) lysyl oxidase homolog 3 is (392 aa)
initn: 725 init1: 528 opt: 775 Z-score: 662.3 bits: 131.4 E(85289): 3.7e-30
Smith-Waterman score: 775; 49.5% identity (68.9% similar) in 222 aa overlap (194-414:152-368)
170 180 190 200 210 220
pF1KB6 DGMVGDDPYNPYKYSDDNPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQ
: : :. : . ::. .:
NP_001 TEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGTRFTAGV---ICSETASDLLLHSALVQ
130 140 150 160 170
230 240 250 260 270 280
pF1KB6 ASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPR
..:.. .. : ::::::::::.: :. : :: :::: ....: : .:: :. :
NP_001 ETAYIEDRPLHMLYCAAEENCLASSARSANW-PYGHRRLLRFSSQIHNLGRADFRPKAGR
180 190 200 210 220 230
290 300 310 320 330 340
pF1KB6 YSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAH
.:: :: :: :::::: :.:::.: : . :::::::::::::: :. .:. :.
NP_001 HSWVWHECHGHYHSMDIFTHYDILTPNGTK-VAEGHKASFCLEDTECQEDVSKRYECANF
240 250 260 270 280 290
350 360 370 380 390 400
pF1KB6 -TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRY
::.. ::.: : :::::::::::::::::::.: .::.. : :::.:::...:. .:
NP_001 GEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKY
300 310 320 330 340 350
410
pF1KB6 TGHHAYASGCTISPY
::. .. .: :
NP_001 DGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
360 370 380 390
>>NP_001276093 (OMIM: 607163) lysyl oxidase homolog 3 is (608 aa)
initn: 725 init1: 528 opt: 775 Z-score: 659.7 bits: 131.6 E(85289): 5.2e-30
Smith-Waterman score: 775; 49.5% identity (68.9% similar) in 222 aa overlap (194-414:368-584)
170 180 190 200 210 220
pF1KB6 DGMVGDDPYNPYKYSDDNPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQ
: : :. : . ::. .:
NP_001 TEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGTRFTAGV---ICSETASDLLLHSALVQ
340 350 360 370 380 390
230 240 250 260 270 280
pF1KB6 ASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPR
..:.. .. : ::::::::::.: :. : :: :::: ....: : .:: :. :
NP_001 ETAYIEDRPLHMLYCAAEENCLASSARSANW-PYGHRRLLRFSSQIHNLGRADFRPKAGR
400 410 420 430 440 450
290 300 310 320 330 340
pF1KB6 YSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAH
.:: :: :: :::::: :.:::.: : . :::::::::::::: :. .:. :.
NP_001 HSWVWHECHGHYHSMDIFTHYDILTPNGTK-VAEGHKASFCLEDTECQEDVSKRYECANF
460 470 480 490 500 510
350 360 370 380 390 400
pF1KB6 -TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRY
::.. ::.: : :::::::::::::::::::.: .::.. : :::.:::...:. .:
NP_001 GEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKY
520 530 540 550 560 570
410
pF1KB6 TGHHAYASGCTISPY
::. .. .: :
NP_001 DGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
580 590 600
>>NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 isofo (753 aa)
initn: 725 init1: 528 opt: 775 Z-score: 658.4 bits: 131.7 E(85289): 6.2e-30
Smith-Waterman score: 775; 49.5% identity (68.9% similar) in 222 aa overlap (194-414:513-729)
170 180 190 200 210 220
pF1KB6 DGMVGDDPYNPYKYSDDNPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQ
: : :. : . ::. .:
NP_115 TEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGTRFTAGV---ICSETASDLLLHSALVQ
490 500 510 520 530
230 240 250 260 270 280
pF1KB6 ASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPR
..:.. .. : ::::::::::.: :. : :: :::: ....: : .:: :. :
NP_115 ETAYIEDRPLHMLYCAAEENCLASSARSANW-PYGHRRLLRFSSQIHNLGRADFRPKAGR
540 550 560 570 580 590
290 300 310 320 330 340
pF1KB6 YSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAH
.:: :: :: :::::: :.:::.: : . :::::::::::::: :. .:. :.
NP_115 HSWVWHECHGHYHSMDIFTHYDILTPNGTK-VAEGHKASFCLEDTECQEDVSKRYECANF
600 610 620 630 640 650
350 360 370 380 390 400
pF1KB6 -TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRY
::.. ::.: : :::::::::::::::::::.: .::.. : :::.:::...:. .:
NP_115 GEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKY
660 670 680 690 700 710
410
pF1KB6 TGHHAYASGCTISPY
::. .. .: :
NP_115 DGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
720 730 740 750
>>XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxidase h (753 aa)
initn: 725 init1: 528 opt: 775 Z-score: 658.4 bits: 131.7 E(85289): 6.2e-30
Smith-Waterman score: 775; 49.5% identity (68.9% similar) in 222 aa overlap (194-414:513-729)
170 180 190 200 210 220
pF1KB6 DGMVGDDPYNPYKYSDDNPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQ
: : :. : . ::. .:
XP_011 TEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGTRFTAGV---ICSETASDLLLHSALVQ
490 500 510 520 530
230 240 250 260 270 280
pF1KB6 ASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPR
..:.. .. : ::::::::::.: :. : :: :::: ....: : .:: :. :
XP_011 ETAYIEDRPLHMLYCAAEENCLASSARSANW-PYGHRRLLRFSSQIHNLGRADFRPKAGR
540 550 560 570 580 590
290 300 310 320 330 340
pF1KB6 YSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAH
.:: :: :: :::::: :.:::.: : . :::::::::::::: :. .:. :.
XP_011 HSWVWHECHGHYHSMDIFTHYDILTPNGTK-VAEGHKASFCLEDTECQEDVSKRYECANF
600 610 620 630 640 650
350 360 370 380 390 400
pF1KB6 -TQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRY
::.. ::.: : :::::::::::::::::::.: .::.. : :::.:::...:. .:
XP_011 GEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKY
660 670 680 690 700 710
410
pF1KB6 TGHHAYASGCTISPY
::. .. .: :
XP_011 DGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
720 730 740 750
417 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:26:45 2016 done: Sat Nov 5 17:26:46 2016
Total Scan time: 9.150 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]