Result of FASTA (omim) for
pFN21AB0931
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0931, 145 aa
1>>>pF1KB0931 145 - 145 aa - 145 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0150+/-0.000424; mu= 7.8422+/- 0.026
mean_var=146.1914+/-32.226, 0's: 0 Z-trim(115.3): 406 B-trim: 752 in 2/51
Lambda= 0.106075
statistics sampled from 25061 (25671) to 25061 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.301), width: 16
Scan time: 4.570
The best scores are: opt bits E(85289)
NP_060843 (OMIM: 609411) synaptojanin-2-binding pr ( 145) 958 157.8 5.8e-39
XP_011510811 (OMIM: 601014) PREDICTED: disks large ( 554) 283 55.2 1.7e-07
NP_001308005 (OMIM: 602887) disks large homolog 4 ( 664) 282 55.1 2.1e-07
NP_001308006 (OMIM: 602887) disks large homolog 4 ( 664) 282 55.1 2.1e-07
XP_011522004 (OMIM: 602887) PREDICTED: disks large ( 664) 282 55.1 2.1e-07
NP_001191317 (OMIM: 601014) disks large homolog 1 ( 788) 283 55.3 2.1e-07
NP_001191316 (OMIM: 601014) disks large homolog 1 ( 800) 283 55.3 2.2e-07
XP_016861312 (OMIM: 601014) PREDICTED: disks large ( 810) 283 55.4 2.2e-07
XP_016861311 (OMIM: 601014) PREDICTED: disks large ( 821) 283 55.4 2.2e-07
XP_016879779 (OMIM: 602887) PREDICTED: disks large ( 697) 282 55.1 2.2e-07
XP_016879778 (OMIM: 602887) PREDICTED: disks large ( 699) 282 55.1 2.2e-07
XP_016879777 (OMIM: 602887) PREDICTED: disks large ( 702) 282 55.1 2.2e-07
XP_016861310 (OMIM: 601014) PREDICTED: disks large ( 843) 283 55.4 2.2e-07
NP_001122299 (OMIM: 602887) disks large homolog 4 ( 721) 282 55.1 2.3e-07
XP_011510808 (OMIM: 601014) PREDICTED: disks large ( 853) 283 55.4 2.3e-07
XP_016861309 (OMIM: 601014) PREDICTED: disks large ( 853) 283 55.4 2.3e-07
NP_001308004 (OMIM: 602887) disks large homolog 4 ( 724) 282 55.1 2.3e-07
XP_016861306 (OMIM: 601014) PREDICTED: disks large ( 871) 283 55.4 2.3e-07
XP_016861307 (OMIM: 601014) PREDICTED: disks large ( 871) 283 55.4 2.3e-07
XP_016861305 (OMIM: 601014) PREDICTED: disks large ( 871) 283 55.4 2.3e-07
XP_011510807 (OMIM: 601014) PREDICTED: disks large ( 871) 283 55.4 2.3e-07
XP_016861308 (OMIM: 601014) PREDICTED: disks large ( 871) 283 55.4 2.3e-07
XP_016861304 (OMIM: 601014) PREDICTED: disks large ( 874) 283 55.4 2.3e-07
XP_016861300 (OMIM: 601014) PREDICTED: disks large ( 875) 283 55.4 2.3e-07
XP_016861303 (OMIM: 601014) PREDICTED: disks large ( 875) 283 55.4 2.3e-07
XP_016861301 (OMIM: 601014) PREDICTED: disks large ( 875) 283 55.4 2.3e-07
XP_016861302 (OMIM: 601014) PREDICTED: disks large ( 875) 283 55.4 2.3e-07
XP_005256548 (OMIM: 602887) PREDICTED: disks large ( 754) 282 55.2 2.3e-07
XP_011510805 (OMIM: 601014) PREDICTED: disks large ( 892) 283 55.4 2.3e-07
XP_016861299 (OMIM: 601014) PREDICTED: disks large ( 892) 283 55.4 2.3e-07
NP_001191315 (OMIM: 601014) disks large homolog 1 ( 892) 283 55.4 2.3e-07
XP_016861296 (OMIM: 601014) PREDICTED: disks large ( 893) 283 55.4 2.3e-07
XP_016861297 (OMIM: 601014) PREDICTED: disks large ( 893) 283 55.4 2.3e-07
XP_016861295 (OMIM: 601014) PREDICTED: disks large ( 893) 283 55.4 2.3e-07
XP_016861298 (OMIM: 601014) PREDICTED: disks large ( 893) 283 55.4 2.3e-07
NP_001308003 (OMIM: 602887) disks large homolog 4 ( 764) 282 55.2 2.3e-07
XP_011510804 (OMIM: 601014) PREDICTED: disks large ( 904) 283 55.4 2.3e-07
NP_001091894 (OMIM: 601014) disks large homolog 1 ( 904) 283 55.4 2.3e-07
XP_016861294 (OMIM: 601014) PREDICTED: disks large ( 904) 283 55.4 2.3e-07
NP_001277912 (OMIM: 601014) disks large homolog 1 ( 904) 283 55.4 2.3e-07
NP_001356 (OMIM: 602887) disks large homolog 4 iso ( 767) 282 55.2 2.3e-07
XP_016861293 (OMIM: 601014) PREDICTED: disks large ( 925) 283 55.4 2.4e-07
XP_016861290 (OMIM: 601014) PREDICTED: disks large ( 926) 283 55.4 2.4e-07
XP_005269346 (OMIM: 601014) PREDICTED: disks large ( 926) 283 55.4 2.4e-07
XP_016861292 (OMIM: 601014) PREDICTED: disks large ( 926) 283 55.4 2.4e-07
XP_016861289 (OMIM: 601014) PREDICTED: disks large ( 926) 283 55.4 2.4e-07
XP_016861291 (OMIM: 601014) PREDICTED: disks large ( 926) 283 55.4 2.4e-07
NP_004078 (OMIM: 601014) disks large homolog 1 iso ( 926) 283 55.4 2.4e-07
XP_011522001 (OMIM: 602887) PREDICTED: disks large ( 797) 282 55.2 2.4e-07
XP_011522000 (OMIM: 602887) PREDICTED: disks large ( 797) 282 55.2 2.4e-07
>>NP_060843 (OMIM: 609411) synaptojanin-2-binding protei (145 aa)
initn: 958 init1: 958 opt: 958 Z-score: 820.4 bits: 157.8 E(85289): 5.8e-39
Smith-Waterman score: 958; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
70 80 90 100 110 120
130 140
pF1KB0 FMVLVPVFALTMVAAWAFMRYRQQL
:::::::::::::::::::::::::
NP_060 FMVLVPVFALTMVAAWAFMRYRQQL
130 140
>>XP_011510811 (OMIM: 601014) PREDICTED: disks large hom (554 aa)
initn: 450 init1: 279 opt: 283 Z-score: 255.5 bits: 55.2 E(85289): 1.7e-07
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:180-296)
10 20
pF1KB0 MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
.:: .:: :::.: :: :::::.:.:
XP_011 GFVSHSHISPIKANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
150 160 170 180 190 200
30 40 50 60 70 80
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
:::. ....::.:....: .:::: ::::. .: :: :: :.... :. ::. ...::
XP_011 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
210 220 230 240 250 260
90 100 110 120 130 140
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
: : :..: :.. . . :.:.
XP_011 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
270 280 290 300 310 320
>--
initn: 253 init1: 167 opt: 238 Z-score: 218.3 bits: 48.3 E(85289): 2e-05
Smith-Waterman score: 238; 43.8% identity (70.8% similar) in 96 aa overlap (6-99:424-513)
10 20 30
pF1KB0 MNGRVDYLVTEE--EINLTRGPSGLGFNIVGGTDQ
: .:.: .. : :: .::::::::: :
XP_011 VDNHVSPSSFLGQTPASPARYSPVSKAVLGDDEITREPRKVVLHRGSTGLGFNIVGGEDG
400 410 420 430 440 450
40 50 60 70 80 90
pF1KB0 QYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVS
. ::..: : .: : :.:.:..::.:.:::. ::. :..:. ..::: ::.
XP_011 E------GIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVT
460 470 480 490 500
100 110 120 130 140
pF1KB0 LRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
. .:.:
XP_011 IVAQYRPEEYSRFEAKIHDLREQMMNSSISSGSGSLRTSQKRSLYVR
510 520 530 540 550
>--
initn: 365 init1: 212 opt: 212 Z-score: 196.8 bits: 44.3 E(85289): 0.00032
Smith-Waterman score: 212; 45.2% identity (80.8% similar) in 73 aa overlap (24-96:297-369)
10 20 30 40 50
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAA
::.:.::. .:.. .:..:::..: :.:::
XP_011 GSIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAA
270 280 290 300 310 320
60 70 80 90 100 110
pF1KB0 ALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEG
::.:: :::.:.::. :... :..:: ..:.. : :.:
XP_011 HKDGKLQIGDKLLAVNNVCLEEVTHEEAVTALKNTSDFVYLKVAKPTSMYMNDGYAPPDI
330 340 350 360 370 380
120 130 140
pF1KB0 DPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
XP_011 TNSSSQPVDNHVSPSSFLGQTPASPARYSPVSKAVLGDDEITREPRKVVLHRGSTGLGFN
390 400 410 420 430 440
>>NP_001308005 (OMIM: 602887) disks large homolog 4 isof (664 aa)
initn: 431 init1: 272 opt: 282 Z-score: 253.8 bits: 55.1 E(85289): 2.1e-07
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:100-183)
10 20 30 40
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
::.: .::.::::.:.::. .:.. .:..:
NP_001 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
70 80 90 100 110 120
50 60 70 80 90 100
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
::..: :.::: ::::: :::::.::. :....:.::: ..:. .: :.:
NP_001 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
130 140 150 160 170 180
110 120 130 140
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
NP_001 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
190 200 210 220 230 240
>--
initn: 292 init1: 268 opt: 268 Z-score: 242.2 bits: 53.0 E(85289): 9.4e-07
Smith-Waterman score: 268; 47.7% identity (79.5% similar) in 88 aa overlap (12-99:4-91)
10 20 30 40 50 60
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
:::.: :: :::::.:.::::. ....: .:....: .:::: ::::.
NP_001 MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
.:.:: :: :.... :. ::. ...:: : : :..:
NP_001 VNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGF
60 70 80 90 100 110
130 140
pF1KB0 FMVLVPVFALTMVAAWAFMRYRQQL
NP_001 SIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAAL
120 130 140 150 160 170
>--
initn: 261 init1: 173 opt: 241 Z-score: 219.9 bits: 48.8 E(85289): 1.7e-05
Smith-Waterman score: 241; 43.3% identity (70.1% similar) in 97 aa overlap (3-99:243-333)
10 20 30
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTD
:. : ..: . :: .::::::::: :
NP_001 SHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGED
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB0 QQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAV
. ::..: : .: : :.:.:..::.:::::: ::.: :..:. ..::: .:
NP_001 GE------GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV
280 290 300 310 320
100 110 120 130 140
pF1KB0 SLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
.. .:..
NP_001 TIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCG
330 340 350 360 370 380
>>NP_001308006 (OMIM: 602887) disks large homolog 4 isof (664 aa)
initn: 431 init1: 272 opt: 282 Z-score: 253.8 bits: 55.1 E(85289): 2.1e-07
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:100-183)
10 20 30 40
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
::.: .::.::::.:.::. .:.. .:..:
NP_001 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
70 80 90 100 110 120
50 60 70 80 90 100
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
::..: :.::: ::::: :::::.::. :....:.::: ..:. .: :.:
NP_001 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
130 140 150 160 170 180
110 120 130 140
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
NP_001 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
190 200 210 220 230 240
>--
initn: 292 init1: 268 opt: 268 Z-score: 242.2 bits: 53.0 E(85289): 9.4e-07
Smith-Waterman score: 268; 47.7% identity (79.5% similar) in 88 aa overlap (12-99:4-91)
10 20 30 40 50 60
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
:::.: :: :::::.:.::::. ....: .:....: .:::: ::::.
NP_001 MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
.:.:: :: :.... :. ::. ...:: : : :..:
NP_001 VNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGF
60 70 80 90 100 110
130 140
pF1KB0 FMVLVPVFALTMVAAWAFMRYRQQL
NP_001 SIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAAL
120 130 140 150 160 170
>--
initn: 261 init1: 173 opt: 241 Z-score: 219.9 bits: 48.8 E(85289): 1.7e-05
Smith-Waterman score: 241; 43.3% identity (70.1% similar) in 97 aa overlap (3-99:243-333)
10 20 30
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTD
:. : ..: . :: .::::::::: :
NP_001 SHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGED
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB0 QQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAV
. ::..: : .: : :.:.:..::.:::::: ::.: :..:. ..::: .:
NP_001 GE------GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV
280 290 300 310 320
100 110 120 130 140
pF1KB0 SLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
.. .:..
NP_001 TIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCG
330 340 350 360 370 380
>>XP_011522004 (OMIM: 602887) PREDICTED: disks large hom (664 aa)
initn: 431 init1: 272 opt: 282 Z-score: 253.8 bits: 55.1 E(85289): 2.1e-07
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:100-183)
10 20 30 40
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
::.: .::.::::.:.::. .:.. .:..:
XP_011 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
70 80 90 100 110 120
50 60 70 80 90 100
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
::..: :.::: ::::: :::::.::. :....:.::: ..:. .: :.:
XP_011 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
130 140 150 160 170 180
110 120 130 140
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
XP_011 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
190 200 210 220 230 240
>--
initn: 292 init1: 268 opt: 268 Z-score: 242.2 bits: 53.0 E(85289): 9.4e-07
Smith-Waterman score: 268; 47.7% identity (79.5% similar) in 88 aa overlap (12-99:4-91)
10 20 30 40 50 60
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQ
:::.: :: :::::.:.::::. ....: .:....: .:::: ::::.
XP_011 MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 EGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPIGHRGEGDPSGIPI
.:.:: :: :.... :. ::. ...:: : : :..:
XP_011 VNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGF
60 70 80 90 100 110
130 140
pF1KB0 FMVLVPVFALTMVAAWAFMRYRQQL
XP_011 SIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAAL
120 130 140 150 160 170
>--
initn: 261 init1: 173 opt: 241 Z-score: 219.9 bits: 48.8 E(85289): 1.7e-05
Smith-Waterman score: 241; 43.3% identity (70.1% similar) in 97 aa overlap (3-99:243-333)
10 20 30
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTD
:. : ..: . :: .::::::::: :
XP_011 SHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGED
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB0 QQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAV
. ::..: : .: : :.:.:..::.:::::: ::.: :..:. ..::: .:
XP_011 GE------GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV
280 290 300 310 320
100 110 120 130 140
pF1KB0 SLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
.. .:..
XP_011 TIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCG
330 340 350 360 370 380
>>NP_001191317 (OMIM: 601014) disks large homolog 1 isof (788 aa)
initn: 432 init1: 279 opt: 283 Z-score: 253.8 bits: 55.3 E(85289): 2.1e-07
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:97-213)
10 20
pF1KB0 MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
.:: .:: :::.: :: :::::.:.:
NP_001 IDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
70 80 90 100 110 120
30 40 50 60 70 80
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
:::. ....::.:....: .:::: ::::. .: :: :: :.... :. ::. ...::
NP_001 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
: : :..: :.. . . :.:.
NP_001 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
190 200 210 220 230 240
>>NP_001191316 (OMIM: 601014) disks large homolog 1 isof (800 aa)
initn: 432 init1: 279 opt: 283 Z-score: 253.7 bits: 55.3 E(85289): 2.2e-07
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:97-213)
10 20
pF1KB0 MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
.:: .:: :::.: :: :::::.:.:
NP_001 IDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
70 80 90 100 110 120
30 40 50 60 70 80
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
:::. ....::.:....: .:::: ::::. .: :: :: :.... :. ::. ...::
NP_001 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
: : :..: :.. . . :.:.
NP_001 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
190 200 210 220 230 240
>>XP_016861312 (OMIM: 601014) PREDICTED: disks large hom (810 aa)
initn: 432 init1: 279 opt: 283 Z-score: 253.6 bits: 55.4 E(85289): 2.2e-07
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:97-213)
10 20
pF1KB0 MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
.:: .:: :::.: :: :::::.:.:
XP_016 IDCISVATSSTQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
70 80 90 100 110 120
30 40 50 60 70 80
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
:::. ....::.:....: .:::: ::::. .: :: :: :.... :. ::. ...::
XP_016 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
: : :..: :.. . . :.:.
XP_016 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
190 200 210 220 230 240
>>XP_016861311 (OMIM: 601014) PREDICTED: disks large hom (821 aa)
initn: 432 init1: 279 opt: 283 Z-score: 253.6 bits: 55.4 E(85289): 2.2e-07
Smith-Waterman score: 283; 42.0% identity (71.4% similar) in 119 aa overlap (1-118:130-246)
10 20
pF1KB0 MNGR-VDYLVTEEEINLTRGPSGLGFNIVG
.:: .:: :::.: :: :::::.:.:
XP_016 AENTVILPTIPQANPPPVLVNTDSLETPTYVNGTDADY--EYEEITLERGNSGLGFSIAG
100 110 120 130 140 150
30 40 50 60 70 80
pF1KB0 GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG
:::. ....::.:....: .:::: ::::. .: :: :: :.... :. ::. ...::
XP_016 GTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAG
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB0 YAVSLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
: : :..: :.. . . :.:.
XP_016 SIVRLYVKRRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAH
220 230 240 250 260 270
>>XP_016879779 (OMIM: 602887) PREDICTED: disks large hom (697 aa)
initn: 431 init1: 272 opt: 282 Z-score: 253.5 bits: 55.1 E(85289): 2.2e-07
Smith-Waterman score: 282; 51.2% identity (83.3% similar) in 84 aa overlap (13-96:133-216)
10 20 30 40
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGI
::.: .::.::::.:.::. .:.. .:..:
XP_016 HSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSI
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB0 YVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQV
::..: :.::: ::::: :::::.::. :....:.::: ..:. .: :.:
XP_016 YVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA
170 180 190 200 210 220
110 120 130 140
pF1KB0 QNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
XP_016 YLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPR
230 240 250 260 270 280
>--
initn: 291 init1: 268 opt: 269 Z-score: 242.8 bits: 53.1 E(85289): 8.7e-07
Smith-Waterman score: 269; 45.4% identity (77.3% similar) in 97 aa overlap (3-99:32-124)
10 20 30
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTD
:...: :::.: :: :::::.:.::::
XP_016 GRTGEHQANSPPVIVNTDTLEAPGYVNGTEGEMEY----EEITLERGNSGLGFSIAGGTD
10 20 30 40 50
40 50 60 70 80 90
pF1KB0 QQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAV
. ....: .:....: .:::: ::::. .:.:: :: :.... :. ::. ...:: :
XP_016 NPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIV
60 70 80 90 100 110
100 110 120 130 140
pF1KB0 SLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
: :..:
XP_016 RLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDG
120 130 140 150 160 170
>--
initn: 261 init1: 173 opt: 241 Z-score: 219.6 bits: 48.8 E(85289): 1.7e-05
Smith-Waterman score: 241; 43.3% identity (70.1% similar) in 97 aa overlap (3-99:276-366)
10 20 30
pF1KB0 MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTD
:. : ..: . :: .::::::::: :
XP_016 SHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGED
250 260 270 280 290 300
40 50 60 70 80 90
pF1KB0 QQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAV
. ::..: : .: : :.:.:..::.:::::: ::.: :..:. ..::: .:
XP_016 GE------GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV
310 320 330 340 350
100 110 120 130 140
pF1KB0 SLRVQHRLQVQNGPIGHRGEGDPSGIPIFMVLVPVFALTMVAAWAFMRYRQQL
.. .:..
XP_016 TIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCG
360 370 380 390 400 410
145 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:19:12 2016 done: Sat Nov 5 17:19:13 2016
Total Scan time: 4.570 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]