FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3903, 465 aa 1>>>pF1KE3903 465 - 465 aa - 465 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4077+/-0.000381; mu= -4.0221+/- 0.024 mean_var=359.6892+/-75.238, 0's: 0 Z-trim(123.9): 131 B-trim: 2176 in 1/57 Lambda= 0.067626 statistics sampled from 44522 (44691) to 44522 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.524), width: 16 Scan time: 11.330 The best scores are: opt bits E(85289) NP_919310 (OMIM: 612488) E3 ubiquitin-protein liga ( 465) 3360 341.5 3e-93 NP_073618 (OMIM: 612488) E3 ubiquitin-protein liga ( 515) 3331 338.7 2.3e-92 NP_919311 (OMIM: 612488) E3 ubiquitin-protein liga ( 432) 3129 318.9 1.7e-86 NP_919313 (OMIM: 612488) E3 ubiquitin-protein liga ( 432) 3129 318.9 1.7e-86 XP_005251423 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 XP_011516015 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 XP_006716784 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 XP_011516014 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 XP_005251424 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 XP_016869784 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 NP_919309 (OMIM: 612488) E3 ubiquitin-protein liga ( 432) 3129 318.9 1.7e-86 XP_005251425 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 432) 3129 318.9 1.7e-86 XP_016869786 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 402) 2865 293.1 9.4e-79 XP_016869785 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 402) 2865 293.1 9.4e-79 XP_016869783 (OMIM: 612488) PREDICTED: E3 ubiquiti ( 444) 2865 293.1 1e-78 >>NP_919310 (OMIM: 612488) E3 ubiquitin-protein ligase R (465 aa) initn: 3360 init1: 3360 opt: 3360 Z-score: 1795.1 bits: 341.5 E(85289): 3e-93 Smith-Waterman score: 3360; 100.0% identity (100.0% similar) in 465 aa overlap (1-465:1-465) 10 20 30 40 50 60 pF1KE3 MACKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 MACKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 NTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 LHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 VVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 GQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 GQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 QEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFEL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDF 370 380 390 400 410 420 430 440 450 460 pF1KE3 ESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE ::::::::::::::::::::::::::::::::::::::::::::: NP_919 ESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 430 440 450 460 >>NP_073618 (OMIM: 612488) E3 ubiquitin-protein ligase R (515 aa) initn: 3331 init1: 3331 opt: 3331 Z-score: 1779.2 bits: 338.7 E(85289): 2.3e-92 Smith-Waterman score: 3331; 99.8% identity (100.0% similar) in 462 aa overlap (4-465:54-515) 10 20 30 pF1KE3 MACKSEDSPSPKRQRLSHSVFDYTSASPAPSPP .::::::::::::::::::::::::::::: NP_073 ERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTSASPAPSPP 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE3 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE3 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE3 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE3 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE3 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 FTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP 330 340 350 360 370 380 340 350 360 370 380 390 pF1KE3 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI 390 400 410 420 430 440 400 410 420 430 440 450 pF1KE3 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 450 460 470 480 490 500 460 pF1KE3 RADASEVHRDSE :::::::::::: NP_073 RADASEVHRDSE 510 >>NP_919311 (OMIM: 612488) E3 ubiquitin-protein ligase R (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: NP_919 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: NP_919 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>NP_919313 (OMIM: 612488) E3 ubiquitin-protein ligase R (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: NP_919 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: NP_919 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>XP_005251423 (OMIM: 612488) PREDICTED: E3 ubiquitin-pr (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: XP_005 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: XP_005 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>XP_011516015 (OMIM: 612488) PREDICTED: E3 ubiquitin-pr (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: XP_011 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: XP_011 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>XP_006716784 (OMIM: 612488) PREDICTED: E3 ubiquitin-pr (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: XP_006 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: XP_006 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>XP_011516014 (OMIM: 612488) PREDICTED: E3 ubiquitin-pr (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: XP_011 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: XP_011 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>XP_005251424 (OMIM: 612488) PREDICTED: E3 ubiquitin-pr (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: XP_005 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: XP_005 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 >>XP_016869784 (OMIM: 612488) PREDICTED: E3 ubiquitin-pr (432 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 1673.7 bits: 318.9 E(85289): 1.7e-86 Smith-Waterman score: 3129; 100.0% identity (100.0% similar) in 432 aa overlap (34-465:1-432) 10 20 30 40 50 60 pF1KE3 KSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTP :::::::::::::::::::::::::::::: XP_016 MRPWEMTSNRQPPSVRPSQHHFSGERCNTP 10 20 30 70 80 90 100 110 120 pF1KE3 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVF 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEV 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESR 340 350 360 370 380 390 430 440 450 460 pF1KE3 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE :::::::::::::::::::::::::::::::::::::::::: XP_016 QLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE 400 410 420 430 465 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:06:08 2016 done: Sun Nov 6 09:06:09 2016 Total Scan time: 11.330 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]