Result of FASTA (omim) for
pFN21AB6440
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6440, 345 aa
1>>>pF1KB6440 345 - 345 aa - 345 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6788+/-0.000332; mu= 15.5354+/- 0.021
mean_var=99.4799+/-19.604, 0's: 0 Z-trim(117.5): 183 B-trim: 0 in 0/54
Lambda= 0.128590
statistics sampled from 29414 (29618) to 29414 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.347), width: 16
Scan time: 8.060
The best scores are: opt bits E(85289)
NP_000033 (OMIM: 138700) beta-2-glycoprotein 1 pre ( 345) 2474 469.1 6e-132
XP_005245495 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 456 95.1 5.5e-19
XP_005245496 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 456 95.1 5.5e-19
NP_002996 (OMIM: 147050,173610) P-selectin precurs ( 830) 456 95.1 5.7e-19
XP_005245493 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 456 95.1 5.7e-19
XP_005245492 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 456 95.1 5.7e-19
NP_000706 (OMIM: 120830) C4b-binding protein alpha ( 597) 431 90.4 1.1e-17
XP_005273309 (OMIM: 120830) PREDICTED: C4b-binding ( 597) 431 90.4 1.1e-17
XP_005273308 (OMIM: 120830) PREDICTED: C4b-binding ( 597) 431 90.4 1.1e-17
NP_000441 (OMIM: 131210,145500) E-selectin precurs ( 610) 427 89.6 1.9e-17
XP_005245497 (OMIM: 147050,173610) PREDICTED: P-se ( 768) 426 89.5 2.5e-17
NP_699197 (OMIM: 611691) sushi, von Willebrand fac (3571) 433 91.4 3.2e-17
XP_011533056 (OMIM: 608397) PREDICTED: CUB and sus (2238) 414 87.7 2.6e-16
XP_011533055 (OMIM: 608397) PREDICTED: CUB and sus (2595) 414 87.8 2.9e-16
XP_016869220 (OMIM: 608397) PREDICTED: CUB and sus (3327) 414 87.9 3.5e-16
XP_011533054 (OMIM: 608397) PREDICTED: CUB and sus (3549) 414 87.9 3.6e-16
NP_150094 (OMIM: 608397) CUB and sushi domain-cont (3564) 414 87.9 3.6e-16
NP_002104 (OMIM: 134371,235400,603075) complement ( 330) 388 82.1 1.8e-15
XP_011515117 (OMIM: 608399) PREDICTED: CUB and sus (2173) 391 83.4 4.9e-15
XP_016868501 (OMIM: 608399) PREDICTED: CUB and sus (3463) 391 83.6 6.9e-15
XP_016868500 (OMIM: 608399) PREDICTED: CUB and sus (3507) 391 83.6 6.9e-15
XP_016868499 (OMIM: 608399) PREDICTED: CUB and sus (3577) 391 83.6 7e-15
XP_011515118 (OMIM: 608399) PREDICTED: CUB and sus (3603) 391 83.6 7.1e-15
XP_016868498 (OMIM: 608399) PREDICTED: CUB and sus (3637) 391 83.6 7.1e-15
NP_937757 (OMIM: 608399) CUB and sushi domain-cont (3667) 391 83.6 7.2e-15
XP_016868497 (OMIM: 608399) PREDICTED: CUB and sus (3681) 391 83.6 7.2e-15
NP_937756 (OMIM: 608399) CUB and sushi domain-cont (3707) 391 83.6 7.2e-15
NP_443132 (OMIM: 608399) CUB and sushi domain-cont (3538) 387 82.9 1.2e-14
NP_000565 (OMIM: 125240,613793) complement decay-a ( 381) 370 78.9 2e-14
NP_001287833 (OMIM: 125240,613793) complement deca ( 384) 370 78.9 2.1e-14
XP_016855956 (OMIM: 125240,613793) PREDICTED: comp ( 412) 370 78.9 2.2e-14
NP_001287832 (OMIM: 125240,613793) complement deca ( 439) 370 78.9 2.3e-14
NP_001108224 (OMIM: 125240,613793) complement deca ( 440) 370 78.9 2.3e-14
NP_001287831 (OMIM: 125240,613793) complement deca ( 444) 370 78.9 2.3e-14
XP_011507586 (OMIM: 134580,613235) PREDICTED: coag ( 675) 371 79.3 2.7e-14
XP_011507588 (OMIM: 134580,613235) PREDICTED: coag ( 628) 369 78.9 3.3e-14
NP_001985 (OMIM: 134580,613235) coagulation factor ( 661) 369 78.9 3.5e-14
XP_011507585 (OMIM: 134580,613235) PREDICTED: coag ( 676) 369 78.9 3.5e-14
XP_016855679 (OMIM: 608398) PREDICTED: CUB and sus (3362) 378 81.2 3.6e-14
XP_016855678 (OMIM: 608398) PREDICTED: CUB and sus (3506) 378 81.2 3.7e-14
XP_016855683 (OMIM: 608398) PREDICTED: CUB and sus (3566) 378 81.2 3.7e-14
XP_016855677 (OMIM: 608398) PREDICTED: CUB and sus (3567) 378 81.2 3.7e-14
XP_016856798 (OMIM: 120920,612922) PREDICTED: memb ( 363) 365 77.9 3.8e-14
XP_016855676 (OMIM: 608398) PREDICTED: CUB and sus (3606) 378 81.2 3.8e-14
XP_016855674 (OMIM: 608398) PREDICTED: CUB and sus (3607) 378 81.2 3.8e-14
XP_016855675 (OMIM: 608398) PREDICTED: CUB and sus (3607) 378 81.2 3.8e-14
XP_011507866 (OMIM: 120920,612922) PREDICTED: memb ( 370) 365 77.9 3.8e-14
XP_016856799 (OMIM: 120920,612922) PREDICTED: memb ( 348) 363 77.5 4.7e-14
NP_758871 (OMIM: 120920,612922) membrane cofactor ( 355) 363 77.5 4.8e-14
XP_016856797 (OMIM: 120920,612922) PREDICTED: memb ( 378) 363 77.6 5e-14
>>NP_000033 (OMIM: 138700) beta-2-glycoprotein 1 precurs (345 aa)
initn: 2474 init1: 2474 opt: 2474 Z-score: 2489.9 bits: 469.1 E(85289): 6e-132
Smith-Waterman score: 2474; 99.7% identity (100.0% similar) in 345 aa overlap (1-345:1-345)
10 20 30 40 50 60
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTTFEYPNTISFSCNTGFYLNGAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTTFEYPNTISFSCNTGFYLNGAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 DGPEEIECTKLGNWSAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFC
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
NP_000 DGPEEIECTKLGNWSAMPSCKASCKVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFC
250 260 270 280 290 300
310 320 330 340
pF1KB6 KNKEKKCSYTEDAQCIDGTIEVPKCFKEHSSLAFWKTDASDVKPC
:::::::::::::::::::::::::::::::::::::::::::::
NP_000 KNKEKKCSYTEDAQCIDGTIEVPKCFKEHSSLAFWKTDASDVKPC
310 320 330 340
>>XP_005245495 (OMIM: 147050,173610) PREDICTED: P-select (790 aa)
initn: 391 init1: 196 opt: 456 Z-score: 461.9 bits: 95.1 E(85289): 5.5e-19
Smith-Waterman score: 456; 30.8% identity (56.7% similar) in 263 aa overlap (13-264:318-572)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYE
.:. :. . :.. .. : :: .:
XP_005 CSFSCEEGFALVGPEVVQCTASGVWTAPAPVCK-AVQCQHLEAPSEGTMDCVHPLTAF-A
290 300 310 320 330 340
50 60 70 80 90
pF1KB6 PGEEITYSCKPGYVSRGGMRKFICPLTGLW--PINT---LKCTPRVCPFAGILENGAVRY
: . :.::: :: . . : .: : :. : ..: : : : .. .
XP_005 YGSSCKFECQPGYRVRG-LDMLRCIDSGHWSAPLPTCEAISCEPLESPVHGSMDCSP-SL
350 360 370 380 390 400
100 110 120 130 140 150
pF1KB6 TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYK
.:.: .. :: : ::.: ::: ..: . :.:. ::: . : .:. : . .
XP_005 RAFQYDTNCSFRCAEGFMLRGADIVRCDNLGQWTAPAPVCQALQCQDLPVPNEARVNCSH
410 420 430 440 450 460
160 170 180 190 200 210
pF1KB6 PSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLP-ECREVKC-PFPSRPDNGF
: .. :... : : . : ... : . :::...: ::. . : :. : :.::
XP_005 PFGAFR--YQSVCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIPCTPLLS-PQNGT
470 480 490 500 510 520
220 230 240 250 260 270
pF1KB6 VNYPAKP--TLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SCKLPVKKA
.. ..: . ::. : : .::::.:::...::. : :. . : :.: .:
XP_005 MTC-VQPLGSSSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPE
530 540 550 560 570
280 290 300 310 320 330
pF1KB6 TVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSS
XP_005 QGSLDCSDTRGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPG
580 590 600 610 620 630
>--
initn: 240 init1: 140 opt: 194 Z-score: 199.2 bits: 46.5 E(85289): 0.00023
Smith-Waterman score: 215; 27.9% identity (55.2% similar) in 154 aa overlap (109-256:167-314)
80 90 100 110 120 130
pF1KB6 CTPRVCPFAGILENGAVRYTTFEYPNTISFSCNT-GFYLNGADSAKCT-EEGKWSPELPV
::. : :. . :. : ..::
XP_005 KSPSAPGKWNDEHCLKKKHALCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB6 CAPII-CPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT
: . : .: . . .: :: : . . :.: . . : . . : . : ::
XP_005 CEYVRECGELELPQHVLMNCSHP-LGNFS-FNSQCSFHCTDGYQVNGPSKLECLASGIWT
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB6 -KLPECREVKCPFPSRPDNGFVN--YPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLG
: :.: ..:: . :. : .. . :: .. .... .:.:..:..: ::: ..:: :
XP_005 NKPPQCLAAQCPPLKIPERGNMTCLHSAK-AFQHQSSCSFSCEEGFALVGPEVVQCTASG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB6 NWSAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTED
:.:
XP_005 VWTAPAPVCKAVQCQHLEAPSEGTMDCVHPLTAFAYGSSCKFECQPGYRVRGLDMLRCID
320 330 340 350 360 370
>>XP_005245496 (OMIM: 147050,173610) PREDICTED: P-select (790 aa)
initn: 391 init1: 196 opt: 456 Z-score: 461.9 bits: 95.1 E(85289): 5.5e-19
Smith-Waterman score: 456; 30.8% identity (56.7% similar) in 263 aa overlap (13-264:318-572)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYE
.:. :. . :.. .. : :: .:
XP_005 CSFSCEEGFALVGPEVVQCTASGVWTAPAPVCK-AVQCQHLEAPSEGTMDCVHPLTAF-A
290 300 310 320 330 340
50 60 70 80 90
pF1KB6 PGEEITYSCKPGYVSRGGMRKFICPLTGLW--PINT---LKCTPRVCPFAGILENGAVRY
: . :.::: :: . . : .: : :. : ..: : : : .. .
XP_005 YGSSCKFECQPGYRVRG-LDMLRCIDSGHWSAPLPTCEAISCEPLESPVHGSMDCSP-SL
350 360 370 380 390 400
100 110 120 130 140 150
pF1KB6 TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYK
.:.: .. :: : ::.: ::: ..: . :.:. ::: . : .:. : . .
XP_005 RAFQYDTNCSFRCAEGFMLRGADIVRCDNLGQWTAPAPVCQALQCQDLPVPNEARVNCSH
410 420 430 440 450 460
160 170 180 190 200 210
pF1KB6 PSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLP-ECREVKC-PFPSRPDNGF
: .. :... : : . : ... : . :::...: ::. . : :. : :.::
XP_005 PFGAFR--YQSVCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIPCTPLLS-PQNGT
470 480 490 500 510 520
220 230 240 250 260 270
pF1KB6 VNYPAKP--TLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SCKLPVKKA
.. ..: . ::. : : .::::.:::...::. : :. . : :.: .:
XP_005 MTC-VQPLGSSSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPE
530 540 550 560 570
280 290 300 310 320 330
pF1KB6 TVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSS
XP_005 QGSLDCSDTRGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPG
580 590 600 610 620 630
>--
initn: 240 init1: 140 opt: 194 Z-score: 199.2 bits: 46.5 E(85289): 0.00023
Smith-Waterman score: 215; 27.9% identity (55.2% similar) in 154 aa overlap (109-256:167-314)
80 90 100 110 120 130
pF1KB6 CTPRVCPFAGILENGAVRYTTFEYPNTISFSCNT-GFYLNGADSAKCT-EEGKWSPELPV
::. : :. . :. : ..::
XP_005 KSPSAPGKWNDEHCLKKKHALCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB6 CAPII-CPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT
: . : .: . . .: :: : . . :.: . . : . . : . : ::
XP_005 CEYVRECGELELPQHVLMNCSHP-LGNFS-FNSQCSFHCTDGYQVNGPSKLECLASGIWT
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB6 -KLPECREVKCPFPSRPDNGFVN--YPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLG
: :.: ..:: . :. : .. . :: .. .... .:.:..:..: ::: ..:: :
XP_005 NKPPQCLAAQCPPLKIPERGNMTCLHSAK-AFQHQSSCSFSCEEGFALVGPEVVQCTASG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB6 NWSAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTED
:.:
XP_005 VWTAPAPVCKAVQCQHLEAPSEGTMDCVHPLTAFAYGSSCKFECQPGYRVRGLDMLRCID
320 330 340 350 360 370
>>NP_002996 (OMIM: 147050,173610) P-selectin precursor [ (830 aa)
initn: 391 init1: 196 opt: 456 Z-score: 461.6 bits: 95.1 E(85289): 5.7e-19
Smith-Waterman score: 456; 30.8% identity (56.7% similar) in 263 aa overlap (13-264:318-572)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYE
.:. :. . :.. .. : :: .:
NP_002 CSFSCEEGFALVGPEVVQCTASGVWTAPAPVCK-AVQCQHLEAPSEGTMDCVHPLTAF-A
290 300 310 320 330 340
50 60 70 80 90
pF1KB6 PGEEITYSCKPGYVSRGGMRKFICPLTGLW--PINT---LKCTPRVCPFAGILENGAVRY
: . :.::: :: . . : .: : :. : ..: : : : .. .
NP_002 YGSSCKFECQPGYRVRG-LDMLRCIDSGHWSAPLPTCEAISCEPLESPVHGSMDCSP-SL
350 360 370 380 390 400
100 110 120 130 140 150
pF1KB6 TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYK
.:.: .. :: : ::.: ::: ..: . :.:. ::: . : .:. : . .
NP_002 RAFQYDTNCSFRCAEGFMLRGADIVRCDNLGQWTAPAPVCQALQCQDLPVPNEARVNCSH
410 420 430 440 450 460
160 170 180 190 200 210
pF1KB6 PSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLP-ECREVKC-PFPSRPDNGF
: .. :... : : . : ... : . :::...: ::. . : :. : :.::
NP_002 PFGAFR--YQSVCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIPCTPLLS-PQNGT
470 480 490 500 510 520
220 230 240 250 260 270
pF1KB6 VNYPAKP--TLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SCKLPVKKA
.. ..: . ::. : : .::::.:::...::. : :. . : :.: .:
NP_002 MTC-VQPLGSSSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPE
530 540 550 560 570
280 290 300 310 320 330
pF1KB6 TVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSS
NP_002 QGSLDCSDTRGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPG
580 590 600 610 620 630
>--
initn: 240 init1: 140 opt: 194 Z-score: 198.9 bits: 46.5 E(85289): 0.00024
Smith-Waterman score: 215; 27.9% identity (55.2% similar) in 154 aa overlap (109-256:167-314)
80 90 100 110 120 130
pF1KB6 CTPRVCPFAGILENGAVRYTTFEYPNTISFSCNT-GFYLNGADSAKCT-EEGKWSPELPV
::. : :. . :. : ..::
NP_002 KSPSAPGKWNDEHCLKKKHALCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB6 CAPII-CPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT
: . : .: . . .: :: : . . :.: . . : . . : . : ::
NP_002 CEYVRECGELELPQHVLMNCSHP-LGNFS-FNSQCSFHCTDGYQVNGPSKLECLASGIWT
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB6 -KLPECREVKCPFPSRPDNGFVN--YPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLG
: :.: ..:: . :. : .. . :: .. .... .:.:..:..: ::: ..:: :
NP_002 NKPPQCLAAQCPPLKIPERGNMTCLHSAK-AFQHQSSCSFSCEEGFALVGPEVVQCTASG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB6 NWSAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTED
:.:
NP_002 VWTAPAPVCKAVQCQHLEAPSEGTMDCVHPLTAFAYGSSCKFECQPGYRVRGLDMLRCID
320 330 340 350 360 370
>>XP_005245493 (OMIM: 147050,173610) PREDICTED: P-select (830 aa)
initn: 391 init1: 196 opt: 456 Z-score: 461.6 bits: 95.1 E(85289): 5.7e-19
Smith-Waterman score: 456; 30.8% identity (56.7% similar) in 263 aa overlap (13-264:318-572)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYE
.:. :. . :.. .. : :: .:
XP_005 CSFSCEEGFALVGPEVVQCTASGVWTAPAPVCK-AVQCQHLEAPSEGTMDCVHPLTAF-A
290 300 310 320 330 340
50 60 70 80 90
pF1KB6 PGEEITYSCKPGYVSRGGMRKFICPLTGLW--PINT---LKCTPRVCPFAGILENGAVRY
: . :.::: :: . . : .: : :. : ..: : : : .. .
XP_005 YGSSCKFECQPGYRVRG-LDMLRCIDSGHWSAPLPTCEAISCEPLESPVHGSMDCSP-SL
350 360 370 380 390 400
100 110 120 130 140 150
pF1KB6 TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYK
.:.: .. :: : ::.: ::: ..: . :.:. ::: . : .:. : . .
XP_005 RAFQYDTNCSFRCAEGFMLRGADIVRCDNLGQWTAPAPVCQALQCQDLPVPNEARVNCSH
410 420 430 440 450 460
160 170 180 190 200 210
pF1KB6 PSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLP-ECREVKC-PFPSRPDNGF
: .. :... : : . : ... : . :::...: ::. . : :. : :.::
XP_005 PFGAFR--YQSVCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIPCTPLLS-PQNGT
470 480 490 500 510 520
220 230 240 250 260 270
pF1KB6 VNYPAKP--TLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SCKLPVKKA
.. ..: . ::. : : .::::.:::...::. : :. . : :.: .:
XP_005 MTC-VQPLGSSSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPE
530 540 550 560 570
280 290 300 310 320 330
pF1KB6 TVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSS
XP_005 QGSLDCSDTRGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPG
580 590 600 610 620 630
>--
initn: 240 init1: 140 opt: 194 Z-score: 198.9 bits: 46.5 E(85289): 0.00024
Smith-Waterman score: 215; 27.9% identity (55.2% similar) in 154 aa overlap (109-256:167-314)
80 90 100 110 120 130
pF1KB6 CTPRVCPFAGILENGAVRYTTFEYPNTISFSCNT-GFYLNGADSAKCT-EEGKWSPELPV
::. : :. . :. : ..::
XP_005 KSPSAPGKWNDEHCLKKKHALCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB6 CAPII-CPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT
: . : .: . . .: :: : . . :.: . . : . . : . : ::
XP_005 CEYVRECGELELPQHVLMNCSHP-LGNFS-FNSQCSFHCTDGYQVNGPSKLECLASGIWT
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB6 -KLPECREVKCPFPSRPDNGFVN--YPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLG
: :.: ..:: . :. : .. . :: .. .... .:.:..:..: ::: ..:: :
XP_005 NKPPQCLAAQCPPLKIPERGNMTCLHSAK-AFQHQSSCSFSCEEGFALVGPEVVQCTASG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB6 NWSAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTED
:.:
XP_005 VWTAPAPVCKAVQCQHLEAPSEGTMDCVHPLTAFAYGSSCKFECQPGYRVRGLDMLRCID
320 330 340 350 360 370
>>XP_005245492 (OMIM: 147050,173610) PREDICTED: P-select (830 aa)
initn: 391 init1: 196 opt: 456 Z-score: 461.6 bits: 95.1 E(85289): 5.7e-19
Smith-Waterman score: 456; 30.8% identity (56.7% similar) in 263 aa overlap (13-264:318-572)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYE
.:. :. . :.. .. : :: .:
XP_005 CSFSCEEGFALVGPEVVQCTASGVWTAPAPVCK-AVQCQHLEAPSEGTMDCVHPLTAF-A
290 300 310 320 330 340
50 60 70 80 90
pF1KB6 PGEEITYSCKPGYVSRGGMRKFICPLTGLW--PINT---LKCTPRVCPFAGILENGAVRY
: . :.::: :: . . : .: : :. : ..: : : : .. .
XP_005 YGSSCKFECQPGYRVRG-LDMLRCIDSGHWSAPLPTCEAISCEPLESPVHGSMDCSP-SL
350 360 370 380 390 400
100 110 120 130 140 150
pF1KB6 TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYK
.:.: .. :: : ::.: ::: ..: . :.:. ::: . : .:. : . .
XP_005 RAFQYDTNCSFRCAEGFMLRGADIVRCDNLGQWTAPAPVCQALQCQDLPVPNEARVNCSH
410 420 430 440 450 460
160 170 180 190 200 210
pF1KB6 PSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLP-ECREVKC-PFPSRPDNGF
: .. :... : : . : ... : . :::...: ::. . : :. : :.::
XP_005 PFGAFR--YQSVCSFTCNEGLLLVGASVLQCLATGNWNSVPPECQAIPCTPLLS-PQNGT
470 480 490 500 510 520
220 230 240 250 260 270
pF1KB6 VNYPAKP--TLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SCKLPVKKA
.. ..: . ::. : : .::::.:::...::. : :. . : :.: .:
XP_005 MTC-VQPLGSSSYKSTCQFICDEGYSLSGPERLDCTRSGRWTDSPPMCEAIKCPELFAPE
530 540 550 560 570
280 290 300 310 320 330
pF1KB6 TVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFKEHSS
XP_005 QGSLDCSDTRGEFNVGSTCHFSCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPG
580 590 600 610 620 630
>--
initn: 240 init1: 140 opt: 194 Z-score: 198.9 bits: 46.5 E(85289): 0.00024
Smith-Waterman score: 215; 27.9% identity (55.2% similar) in 154 aa overlap (109-256:167-314)
80 90 100 110 120 130
pF1KB6 CTPRVCPFAGILENGAVRYTTFEYPNTISFSCNT-GFYLNGADSAKCT-EEGKWSPELPV
::. : :. . :. : ..::
XP_005 KSPSAPGKWNDEHCLKKKHALCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB6 CAPII-CPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT
: . : .: . . .: :: : . . :.: . . : . . : . : ::
XP_005 CEYVRECGELELPQHVLMNCSHP-LGNFS-FNSQCSFHCTDGYQVNGPSKLECLASGIWT
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB6 -KLPECREVKCPFPSRPDNGFVN--YPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLG
: :.: ..:: . :. : .. . :: .. .... .:.:..:..: ::: ..:: :
XP_005 NKPPQCLAAQCPPLKIPERGNMTCLHSAK-AFQHQSSCSFSCEEGFALVGPEVVQCTASG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB6 NWSAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTED
:.:
XP_005 VWTAPAPVCKAVQCQHLEAPSEGTMDCVHPLTAFAYGSSCKFECQPGYRVRGLDMLRCID
320 330 340 350 360 370
>>NP_000706 (OMIM: 120830) C4b-binding protein alpha cha (597 aa)
initn: 285 init1: 120 opt: 431 Z-score: 438.4 bits: 90.4 E(85289): 1.1e-17
Smith-Waterman score: 431; 30.7% identity (53.7% similar) in 270 aa overlap (17-267:45-303)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPL---KTFYEP
:. : .: : : :.. . . .: ..
NP_000 RKMAAWPFSRLWKVSDPILFQMTLIAALLPAVLG-NCGPPPTLSFAAPMDITLTETRFKT
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB6 GEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTT-FEY
: . :.: :::: . . . : : : ::. : . : : :.:: :. : . .
NP_000 GTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTF-CIYKRCRHPGELRNGQVEIKTDLSF
80 90 100 110 120 130
110 120 130 140 150
pF1KB6 PNTISFSCNTGFYLNGADSAKCTEEGK---WSPELPVCAPIIC-PPPSIPTFATLRVYKP
. : :::. ::.: :. ...: . . :: :: : . : :::.: : .
NP_000 GSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEIVKCKPPPDI------RNGRH
140 150 160 170 180
160 170 180 190 200 210
pF1KB6 SAGNNSL-YRDTAVFECLPQHAMFGNDTITCT----THGNWTKLPE-CREVKCPFPSRPD
:. .: : .... : :. ...:. .:.:: : : : : :... : .::
NP_000 SGEENFYAYGFSVTYSCDPRFSLLGHASISCTVENETIGVWRPSPPTCEKITC---RKPD
190 200 210 220 230 240
220 230 240 250 260
pF1KB6 --NGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SC-KLP
.: . : ::: .: :. :. : : :.: ..:. . :.:. :: .::
NP_000 VSHGEMVSGFGPIYNYKDTIVFKCQKGFVLRGSSVIHCDADSKWNPSPPACEPNSCINLP
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB6 VKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFK
NP_000 DIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTTVICQKNLRWTPYQGCEAL
310 320 330 340 350 360
>--
initn: 159 init1: 96 opt: 286 Z-score: 293.0 bits: 63.5 E(85289): 1.4e-09
Smith-Waterman score: 286; 27.1% identity (49.2% similar) in 240 aa overlap (36-261:316-539)
10 20 30 40 50 60
pF1KB6 LILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKT-FYEPGEEITYSCKPGYV-SRGGMRK
: : : : . : :.::: .
NP_000 KWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTT
290 300 310 320 330 340
70 80 90 100 110
pF1KB6 FICPLTGLW-PINTLKCTPRVCPFAGILENGAVR---------YTTFEYPNTISFSCNTG
:: . : : . : :: :.:: . . .. : . :::::.
NP_000 VICQKNLRWTPYQ--GCEALCCP-EPKLNNGEITQHRKSRPANHCVYFYGDEISFSCHET
350 360 370 380 390 400
120 130 140 150 160 170
pF1KB6 FYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFE
. :: : .: :::. : :. : ::.: :: :. . :.... ..:
NP_000 SRF----SAICQGDGTWSPRTPSCGDICNFPPKIAHGH----YKQSS-SYSFFKEEIIYE
410 420 430 440 450
180 190 200 210 220 230
pF1KB6 CLPQHAMFGNDTITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATF
: . . :. ..:. ...:. :.:. . : : :: .. : ...:.
NP_000 CDKGYILVGQAKLSCS-YSHWSAPAPQCKAL-CRKPELV-NGRLSVD-KDQYVEPENVTI
460 470 480 490 500
240 250 260 270 280 290
pF1KB6 GCHDGYSLDGPEEIECTKLGNW-SAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGML
: .::.. ::. : :. .: .:.:.
NP_000 QCDSGYGVVGPQSITCSGNRTWYPEVPKCEWETPEGCEQVLTGKRLMQCLPNPEDVKMAL
510 520 530 540 550 560
>>XP_005273309 (OMIM: 120830) PREDICTED: C4b-binding pro (597 aa)
initn: 285 init1: 120 opt: 431 Z-score: 438.4 bits: 90.4 E(85289): 1.1e-17
Smith-Waterman score: 431; 30.7% identity (53.7% similar) in 270 aa overlap (17-267:45-303)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPL---KTFYEP
:. : .: : : :.. . . .: ..
XP_005 RKMAAWPFSRLWKVSDPILFQMTLIAALLPAVLG-NCGPPPTLSFAAPMDITLTETRFKT
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB6 GEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTT-FEY
: . :.: :::: . . . : : : ::. : . : : :.:: :. : . .
XP_005 GTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTF-CIYKRCRHPGELRNGQVEIKTDLSF
80 90 100 110 120 130
110 120 130 140 150
pF1KB6 PNTISFSCNTGFYLNGADSAKCTEEGK---WSPELPVCAPIIC-PPPSIPTFATLRVYKP
. : :::. ::.: :. ...: . . :: :: : . : :::.: : .
XP_005 GSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEIVKCKPPPDI------RNGRH
140 150 160 170 180
160 170 180 190 200 210
pF1KB6 SAGNNSL-YRDTAVFECLPQHAMFGNDTITCT----THGNWTKLPE-CREVKCPFPSRPD
:. .: : .... : :. ...:. .:.:: : : : : :... : .::
XP_005 SGEENFYAYGFSVTYSCDPRFSLLGHASISCTVENETIGVWRPSPPTCEKITC---RKPD
190 200 210 220 230 240
220 230 240 250 260
pF1KB6 --NGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SC-KLP
.: . : ::: .: :. :. : : :.: ..:. . :.:. :: .::
XP_005 VSHGEMVSGFGPIYNYKDTIVFKCQKGFVLRGSSVIHCDADSKWNPSPPACEPNSCINLP
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB6 VKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFK
XP_005 DIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTTVICQKNLRWTPYQGCEAL
310 320 330 340 350 360
>--
initn: 159 init1: 96 opt: 286 Z-score: 293.0 bits: 63.5 E(85289): 1.4e-09
Smith-Waterman score: 286; 27.1% identity (49.2% similar) in 240 aa overlap (36-261:316-539)
10 20 30 40 50 60
pF1KB6 LILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKT-FYEPGEEITYSCKPGYV-SRGGMRK
: : : : . : :.::: .
XP_005 KWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTT
290 300 310 320 330 340
70 80 90 100 110
pF1KB6 FICPLTGLW-PINTLKCTPRVCPFAGILENGAVR---------YTTFEYPNTISFSCNTG
:: . : : . : :: :.:: . . .. : . :::::.
XP_005 VICQKNLRWTPYQ--GCEALCCP-EPKLNNGEITQHRKSRPANHCVYFYGDEISFSCHET
350 360 370 380 390 400
120 130 140 150 160 170
pF1KB6 FYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFE
. :: : .: :::. : :. : ::.: :: :. . :.... ..:
XP_005 SRF----SAICQGDGTWSPRTPSCGDICNFPPKIAHGH----YKQSS-SYSFFKEEIIYE
410 420 430 440 450
180 190 200 210 220 230
pF1KB6 CLPQHAMFGNDTITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATF
: . . :. ..:. ...:. :.:. . : : :: .. : ...:.
XP_005 CDKGYILVGQAKLSCS-YSHWSAPAPQCKAL-CRKPELV-NGRLSVD-KDQYVEPENVTI
460 470 480 490 500
240 250 260 270 280 290
pF1KB6 GCHDGYSLDGPEEIECTKLGNW-SAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGML
: .::.. ::. : :. .: .:.:.
XP_005 QCDSGYGVVGPQSITCSGNRTWYPEVPKCEWETPEGCEQVLTGKRLMQCLPNPEDVKMAL
510 520 530 540 550 560
>>XP_005273308 (OMIM: 120830) PREDICTED: C4b-binding pro (597 aa)
initn: 285 init1: 120 opt: 431 Z-score: 438.4 bits: 90.4 E(85289): 1.1e-17
Smith-Waterman score: 431; 30.7% identity (53.7% similar) in 270 aa overlap (17-267:45-303)
10 20 30 40
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPL---KTFYEP
:. : .: : : :.. . . .: ..
XP_005 RKMAAWPFSRLWKVSDPILFQMTLIAALLPAVLG-NCGPPPTLSFAAPMDITLTETRFKT
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB6 GEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTT-FEY
: . :.: :::: . . . : : : ::. : . : : :.:: :. : . .
XP_005 GTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTF-CIYKRCRHPGELRNGQVEIKTDLSF
80 90 100 110 120 130
110 120 130 140 150
pF1KB6 PNTISFSCNTGFYLNGADSAKCTEEGK---WSPELPVCAPIIC-PPPSIPTFATLRVYKP
. : :::. ::.: :. ...: . . :: :: : . : :::.: : .
XP_005 GSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEIVKCKPPPDI------RNGRH
140 150 160 170 180
160 170 180 190 200 210
pF1KB6 SAGNNSL-YRDTAVFECLPQHAMFGNDTITCT----THGNWTKLPE-CREVKCPFPSRPD
:. .: : .... : :. ...:. .:.:: : : : : :... : .::
XP_005 SGEENFYAYGFSVTYSCDPRFSLLGHASISCTVENETIGVWRPSPPTCEKITC---RKPD
190 200 210 220 230 240
220 230 240 250 260
pF1KB6 --NGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKA-SC-KLP
.: . : ::: .: :. :. : : :.: ..:. . :.:. :: .::
XP_005 VSHGEMVSGFGPIYNYKDTIVFKCQKGFVLRGSSVIHCDADSKWNPSPPACEPNSCINLP
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB6 VKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEVPKCFK
XP_005 DIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTTVICQKNLRWTPYQGCEAL
310 320 330 340 350 360
>--
initn: 159 init1: 96 opt: 286 Z-score: 293.0 bits: 63.5 E(85289): 1.4e-09
Smith-Waterman score: 286; 27.1% identity (49.2% similar) in 240 aa overlap (36-261:316-539)
10 20 30 40 50 60
pF1KB6 LILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKT-FYEPGEEITYSCKPGYV-SRGGMRK
: : : : . : :.::: .
XP_005 KWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTT
290 300 310 320 330 340
70 80 90 100 110
pF1KB6 FICPLTGLW-PINTLKCTPRVCPFAGILENGAVR---------YTTFEYPNTISFSCNTG
:: . : : . : :: :.:: . . .. : . :::::.
XP_005 VICQKNLRWTPYQ--GCEALCCP-EPKLNNGEITQHRKSRPANHCVYFYGDEISFSCHET
350 360 370 380 390 400
120 130 140 150 160 170
pF1KB6 FYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFE
. :: : .: :::. : :. : ::.: :: :. . :.... ..:
XP_005 SRF----SAICQGDGTWSPRTPSCGDICNFPPKIAHGH----YKQSS-SYSFFKEEIIYE
410 420 430 440 450
180 190 200 210 220 230
pF1KB6 CLPQHAMFGNDTITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATF
: . . :. ..:. ...:. :.:. . : : :: .. : ...:.
XP_005 CDKGYILVGQAKLSCS-YSHWSAPAPQCKAL-CRKPELV-NGRLSVD-KDQYVEPENVTI
460 470 480 490 500
240 250 260 270 280 290
pF1KB6 GCHDGYSLDGPEEIECTKLGNW-SAMPSCKASCKLPVKKATVVYQGERVKIQEKFKNGML
: .::.. ::. : :. .: .:.:.
XP_005 QCDSGYGVVGPQSITCSGNRTWYPEVPKCEWETPEGCEQVLTGKRLMQCLPNPEDVKMAL
510 520 530 540 550 560
>>NP_000441 (OMIM: 131210,145500) E-selectin precursor [ (610 aa)
initn: 454 init1: 158 opt: 427 Z-score: 434.3 bits: 89.6 E(85289): 1.9e-17
Smith-Waterman score: 427; 27.0% identity (54.8% similar) in 341 aa overlap (9-333:169-497)
10 20 30
pF1KB6 MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLK
::.. :. . . .:. . ::
NP_000 YTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLG
140 150 160 170 180 190
40 50 60 70 80 90
pF1KB6 TF-YEPGEEITYSCKPGYVSRGGMRKFICPLTGLW--PI---NTLKCTPRVCPFAGILEN
.: :. . : :: ::. ..:. . : .: : :: :...: . : :..:
NP_000 NFSYNSSCSI--SCDRGYLP-SSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVEC
200 210 220 230 240 250
100 110 120 130 140 150
pF1KB6 GAVRYTTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFAT
.: . .: .:.:. :: : ::.: .:: :.:. : :.: . : : ..
NP_000 FQ-NPGSFPWNTTCTFDCEEGFELMGAQSLQCTSSGNWDNEKPTCKAVTCRAVRQPQNGS
260 270 280 290 300 310
160 170 180 190 200 210
pF1KB6 LRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPECREVKCPFPSRP
.: . ::. . .... : : . : . :::.:.::. .: :. .: : :
NP_000 VRCSHSPAGEFT-FKSSCNFTCEEGFMLQGPAQVECTTQGQWTQQIPVCEAFQCTALSNP
320 330 340 350 360 370
220 230 240 250 260
pF1KB6 DNGFVN-YP-AKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNW-SAMPSCKASCKLPV
. :..: : :. .. : .. :.:..:. : : ....: :.: . :.:.:
NP_000 ERGYMNCLPSASGSFRYGSSCEFSCEQGFVLKGSKRLQCGPTGEWDNEKPTCEAV-----
380 390 400 410 420
270 280 290 300 310 320
pF1KB6 KKATVVYQGER--VKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDG---TIEVP
. .:.: . :. .. . . . .. .: :.. . . :. .: . : :::
NP_000 -RCDAVHQPPKGLVRCAHSPIGEFTYKSSCAFSCEEGFELHGSTQ-LECTSQGQWTEEVP
430 440 450 460 470 480
330 340
pF1KB6 KC-FKEHSSLAFWKTDASDVKPC
.: . ::::
NP_000 SCQVVKCSSLAVPGKINMSCSGEPVFGTVCKFACPEGWTLNGSAARTCGATGHWSGLLPT
490 500 510 520 530 540
345 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:40:40 2016 done: Sat Nov 5 16:40:41 2016
Total Scan time: 8.060 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]