Result of FASTA (omim) for
pFN21AB5922
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5922, 533 aa
1>>>pF1KB5922 533 - 533 aa - 533 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 16.2083+/-0.000433; mu= -33.0294+/- 0.027
mean_var=608.2232+/-124.996, 0's: 0 Z-trim(125.0): 46 B-trim: 0 in 0/61
Lambda= 0.052005
statistics sampled from 47748 (47828) to 47748 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.561), width: 16
Scan time: 12.760
The best scores are: opt bits E(85289)
NP_005556 (OMIM: 601603) lymphocyte cytosolic prot ( 533) 3729 294.4 5.8e-79
NP_443196 (OMIM: 611434) cytokine-dependent hemato ( 428) 468 49.7 2.1e-05
XP_011512077 (OMIM: 611434) PREDICTED: cytokine-de ( 443) 468 49.7 2.2e-05
XP_011538030 (OMIM: 604515,613502) PREDICTED: B-ce ( 456) 439 47.5 0.0001
NP_037446 (OMIM: 604515,613502) B-cell linker prot ( 456) 439 47.5 0.0001
XP_016863173 (OMIM: 611434) PREDICTED: cytokine-de ( 402) 365 41.9 0.0043
XP_016863174 (OMIM: 611434) PREDICTED: cytokine-de ( 399) 358 41.4 0.0062
>>NP_005556 (OMIM: 601603) lymphocyte cytosolic protein (533 aa)
initn: 3729 init1: 3729 opt: 3729 Z-score: 1538.7 bits: 294.4 E(85289): 5.8e-79
Smith-Waterman score: 3729; 100.0% identity (100.0% similar) in 533 aa overlap (1-533:1-533)
10 20 30 40 50 60
pF1KB5 MALRNVPFRSEVLGWDPDSLADYFKKLNYKDCEKAVKKYHIDGARFLNLTENDIQKFPKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MALRNVPFRSEVLGWDPDSLADYFKKLNYKDCEKAVKKYHIDGARFLNLTENDIQKFPKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESPNDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESPNDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DGEDDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDRPPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DGEDDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDRPPSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 PGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENSLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENSLNE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKES
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 QVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
490 500 510 520 530
>>NP_443196 (OMIM: 611434) cytokine-dependent hematopoie (428 aa)
initn: 474 init1: 358 opt: 468 Z-score: 217.8 bits: 49.7 E(85289): 2.1e-05
Smith-Waterman score: 486; 29.9% identity (54.4% similar) in 421 aa overlap (150-528:14-417)
120 130 140 150 160 170
pF1KB5 QDGEDDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPA-KPFPNSNSMYIDRPP
::: . .:: :: . .: ::
NP_443 MNRQGNRKTTKEGSNDLK-FQNFSLPKNRSWPRINSA------
10 20 30
180 190 200 210 220 230
pF1KB5 SGKTPQ--QPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSID
.:. . .: . .: .::. :.. . :. :: .: ::: :
NP_443 TGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQS----IKILPARPIK
40 50 60 70 80 90
240 250 260 270
pF1KB5 RST-------KPPLDRSLAPFD-REPFTLGKKPPFS--------DKPSIPAGRSL---GE
.: : .: : :.: : ...:. : .. ::: :: :.
NP_443 ESEYADTHYFKVAMDTPL-PLDTRTSISIGQ-PTWNTQTRLERVDKPISKDVRSQNIKGD
100 110 120 130 140 150
280 290 300 310 320
pF1KB5 HLPKIQKPPLPPTTER---HERSSPLP----GKKPPVPKHGWGPDRRE-------NDEDD
. .: :::: .. .::: ...::. .. :. .. : ..
NP_443 ASVRKNKIPLPPPRPLITLPKKYQPLPPEPESSRPPLSQRHTFPEVQRMPSQISLRDLSE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB5 VHQ-RPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFS
: . . .:. : :.. . ...:. :. :: . : .: . . ... :
NP_443 VLEAEKVPHNQRKPESTHLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSP
220 230 240 250 260
390 400 410 420 430
pF1KB5 QGPSNRPPIRAEGRNFPLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKI
: .:: .. :: ::: : ..... ..:::.. .: .: :. :
NP_443 Q--RCQPPASCSPHENILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKE
270 280 290 300 310 320
440 450 460 470 480 490
pF1KB5 NQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVS
:.::.::::: : :. .:::: :.:..::::..::. ...: . ::::::: : : ::
NP_443 NKDGSFLVRDCSTKSKEEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEKFDSVE
330 340 350 360 370 380
500 510 520 530
pF1KB5 DIIDYFRKMPLLLIDGKNRGS--RYQCTLTHAAGYP
:::......:..:::::.. . : :: ::.
NP_443 DIIEHYKNFPIILIDGKDKTGVHRKQCHLTQPLPLTRHLLPL
390 400 410 420
>>XP_011512077 (OMIM: 611434) PREDICTED: cytokine-depend (443 aa)
initn: 474 init1: 358 opt: 468 Z-score: 217.6 bits: 49.7 E(85289): 2.2e-05
Smith-Waterman score: 487; 28.6% identity (54.4% similar) in 465 aa overlap (87-528:11-432)
60 70 80 90 100 110
pF1KB5 FPKLRVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESP
:::: .. ... . : .... ... :
XP_011 MAELKIPLTRQVPRTMNRQGNRKTTKEGSNDLKFQNFSLP
10 20 30 40
120 130 140 150 160
pF1KB5 ND---DQDGEDDGDYESPN------EEEEAPVED------DADYEPPPSNDEEALQN-SI
.. . . :.:. : :.. : : : : ::. : ::. :. .:
XP_011 KNRSWPRINSATGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKI
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB5 LPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPS
:::.:. .:. : : :. .. :.: : . .: :: :. .
XP_011 LPARPIKESE--YADTH-YFKVAMDTPLP-------LDTRTSISIGQPTWNTQTRLERVD
110 120 130 140 150
230 240 250 260 270
pF1KB5 R--SRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEH
. :.. .. .. . . :..: :: : : .:: :: .: :
XP_011 KPISKDVRSQNIKGDASVRKNKIPL-----PPPRPLITLPKKY----QPLPPE-------
160 170 180 190
280 290 300 310 320 330
pF1KB5 LPKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMS
:. ..::: ..:: : : . . :. .: .. . .:. : :
XP_011 -PESSRPPL---SQRHTF--------PEVQRMPSQISLRDLSEV-LEAEKVPHNQRKPES
200 210 220 230 240
340 350 360 370 380 390
pF1KB5 SNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNF
.. . ...:. :. :: . : .: . . ... : : .:: ..
XP_011 THLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSPQ--RCQPPASCSPHEN
250 260 270 280 290
400 410 420 430 440 450
pF1KB5 PLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTT
:: ::: : ..... ..:::.. .: .: :. : :.::.::::: : :.
XP_011 ILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLVRDCSTKSK
300 310 320 330 340 350
460 470 480 490 500 510
pF1KB5 TNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDG
.:::: :.:..::::..::. ...: . ::::::: : : :: :::......:..::::
XP_011 EEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEKFDSVEDIIEHYKNFPIILIDG
360 370 380 390 400 410
520 530
pF1KB5 KNRGS--RYQCTLTHAAGYP
:.. . : :: ::.
XP_011 KDKTGVHRKQCHLTQPLPLTRHLLPL
420 430 440
>>XP_011538030 (OMIM: 604515,613502) PREDICTED: B-cell l (456 aa)
initn: 459 init1: 262 opt: 439 Z-score: 205.7 bits: 47.5 E(85289): 0.0001
Smith-Waterman score: 529; 27.7% identity (53.6% similar) in 470 aa overlap (65-517:18-441)
40 50 60 70 80
pF1KB5 AVKKYHIDGARFLNLTENDIQKFPKLRVPILSKLSQEINKNEE------RRSIFTRKPQV
:.:. ..:..:: .. :.:
XP_011 MDSSPCALLARRTSLGQLQKMVHDIKNNEGGIMNKIKKLKVKAPPSV
10 20 30 40
90 100 110 120 130 140
pF1KB5 PRFPEETESHEEDNGGWSSFEEDDYESPNDDQDGEDDGDYESPNEEEEAPVEDDADYEPP
:: .:: ... ::. ..:::.:.. .:.: : : ::. ::. ::::
XP_011 PRRDYASESPADEEEQWSDDFDSDYENPDEHSDSEM---YVMPAEENA----DDS-YEPP
50 60 70 80 90
150 160 170 180 190 200
pF1KB5 PSNDEEALQNSILPAKPFPNSNSMYIDR-------PPSGKT-PQQPPVPPQRPMAALPPP
: ..: . :: :: . . ::: :: .:: :..: : .. . :
XP_011 PVEQET---RPVHPALPF--ARGEYIDNRSSQRHSPPFSKTLPSKPSWPSEKARLTSTLP
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB5 PAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKK
..: ::. . . ... .:. . :.. : . : : .. :.. .
XP_011 ALTALQKPQVPPKPK----GLLEDEADYVVPVEDNDENYIHPTESSSPPPEKAPMVNRST
160 170 180 190 200 210
270 280 290 300 310
pF1KB5 PPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPLP--GKKPPVPKHGWGPDRRE
: :. :. : : . :.. . ::.. :::: :::: .: . ..
XP_011 KPNSSTPASPPGTASGRNSGAWETKSPPPAAP-----SPLPRAGKKPTTPLKTTPVASQQ
220 230 240 250 260
320 330 340 350 360 370
pF1KB5 NDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLP
: . ...:.: . : . . ..:. : ..... :.
XP_011 NASSVCEEKPIP-------AERHRGSSHRQEAVQSPV--------FPPAQKQIHQKPIPL
270 280 290 300 310
380 390 400 410 420 430
pF1KB5 PYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENS-LNEEWYVSYITRPEAEAALR
: :..: . : . .: :::. . .:.: . : . ::.. : :: ::.
XP_011 PRFTEGGN--PTV--DG-----PLPSFSSNSTISEQEAGVLCKPWYAGACDRKSAEEALH
320 330 340 350 360
440 450 460 470 480 490
pF1KB5 KINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLS
. :.::.::.: :: . . .::.:.:... .:::: .:. . .. : :: :.: : :
XP_011 RSNKDGSFLIRKSSGHDSKQPYTLVVFFNKRVYNIPVRFIEATKQYALGRKKNGEEYFGS
370 380 390 400 410 420
500 510 520 530
pF1KB5 VSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
:..:: .. ::.:::..:
XP_011 VAEIIRNHQHSPLVLIDSQNNTKDSTRLKYAVKVS
430 440 450
>>NP_037446 (OMIM: 604515,613502) B-cell linker protein (456 aa)
initn: 459 init1: 262 opt: 439 Z-score: 205.7 bits: 47.5 E(85289): 0.0001
Smith-Waterman score: 536; 27.7% identity (53.2% similar) in 487 aa overlap (54-517:1-441)
30 40 50 60 70
pF1KB5 FKKLNYKDCEKAVKKYHIDGARFLNLTENDIQKFPKLRVPILSKLSQ------EINKNEE
..:. :. :: .:: : .:..::
NP_037 MDKLNKITVPASQKLRQLQKMVHDIKNNEG
10 20 30
80 90 100 110 120 130
pF1KB5 ------RRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESPNDDQDGEDDGDYESP
.. :.::: .:: ... ::. ..:::.:.. .:.: : :
NP_037 GIMNKIKKLKVKAPPSVPRRDYASESPADEEEQWSDDFDSDYENPDEHSDSEM---YVMP
40 50 60 70 80
140 150 160 170 180
pF1KB5 NEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDR-------PPSGKT-P
::. ::. ::::: ..: . :: :: . . ::: :: .:: :
NP_037 AEENA----DDS-YEPPPVEQET---RPVHPALPF--ARGEYIDNRSSQRHSPPFSKTLP
90 100 110 120 130
190 200 210 220 230 240
pF1KB5 QQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTKPPL
..: : .. . : ..: ::. . . ... .:. . :.. :
NP_037 SKPSWPSEKARLTSTLPALTALQKPQVPPKPK----GLLEDEADYVVPVEDNDENYIHPT
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB5 DRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHERSSPLP--
. : : .. :.. . : :. :. : : . :.. . ::.. ::::
NP_037 ESSSPPPEKAPMVNRSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAP-----SPLPRA
200 210 220 230 240
310 320 330 340 350 360
pF1KB5 GKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSSNTFPSRSTKPSPMNPLPSSHMP
:::: .: . ..: . ...:.: . : . . ..:.
NP_037 GKKPTTPLKTTPVASQQNASSVCEEKPIP-------AERHRGSSHRQEAVQSPV------
250 260 270 280 290
370 380 390 400 410 420
pF1KB5 GAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFPLPLPNKPRPPSPAEEENS-LNE
: ..... :. : :..: . : . .: :::. . .:.: . : .
NP_037 --FPPAQKQIHQKPIPLPRFTEGGN--PTV--DG-----PLPSFSSNSTISEQEAGVLCK
300 310 320 330 340
430 440 450 460 470 480
pF1KB5 EWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTTTNPYVLMVLYKDKVYNIQIRYQKES
::.. : :: ::.. :.::.::.: :: . . .::.:.:... .:::: .:. . .
NP_037 PWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVVFFNKRVYNIPVRFIEAT
350 360 370 380 390 400
490 500 510 520 530
pF1KB5 QVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTHAAGYP
. : :: :.: : ::..:: .. ::.:::..:
NP_037 KQYALGRKKNGEEYFGSVAEIIRNHQHSPLVLIDSQNNTKDSTRLKYAVKVS
410 420 430 440 450
>>XP_016863173 (OMIM: 611434) PREDICTED: cytokine-depend (402 aa)
initn: 389 init1: 273 opt: 365 Z-score: 176.5 bits: 41.9 E(85289): 0.0043
Smith-Waterman score: 384; 27.0% identity (52.4% similar) in 433 aa overlap (87-498:11-400)
60 70 80 90 100 110
pF1KB5 FPKLRVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESP
:::: .. ... . : .... ... :
XP_016 MAELKIPLTRQVPRTMNRQGNRKTTKEGSNDLKFQNFSLP
10 20 30 40
120 130 140 150 160
pF1KB5 ND---DQDGEDDGDYESPN------EEEEAPVED------DADYEPPPSNDEEALQN-SI
.. . . :.:. : :.. : : : : ::. : ::. :. .:
XP_016 KNRSWPRINSATGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKI
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB5 LPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPS
:::.:. .:. : : :. .. :.: : . .: :: :. .
XP_016 LPARPIKESE--YADTHYF-KVAMDTPLP-------LDTRTSISIGQPTWNTQTRLERVD
110 120 130 140 150
230 240 250 260 270
pF1KB5 R--SRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEH
. :.. .. .. . . :..: :: : : .:: :: .: :
XP_016 KPISKDVRSQNIKGDASVRKNKIPL-----PPPRPLITLPKKY----QPLPPE-------
160 170 180 190
280 290 300 310 320 330
pF1KB5 LPKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMS
:. ..::: ..:: : : . . :. .: .. . .:. : :
XP_016 -PESSRPPL---SQRHTF--------PEVQRMPSQISLRDLSEV-LEAEKVPHNQRKPES
200 210 220 230 240
340 350 360 370 380 390
pF1KB5 SNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNF
.. . ...:. :. :: . : .: . . ... : : .:: ..
XP_016 THLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSPQ--RCQPPASCSPHEN
250 260 270 280 290
400 410 420 430 440 450
pF1KB5 PLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTT
:: ::: : ..... ..:::.. .: .: :. : :.::.::::: : :.
XP_016 ILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLVRDCSTKSK
300 310 320 330 340 350
460 470 480 490 500 510
pF1KB5 TNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDG
.:::: :.:..::::..::. ...: . ::::::: :. . :
XP_016 EEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDENVIPVRS
360 370 380 390 400
520 530
pF1KB5 KNRGSRYQCTLTHAAGYP
>>XP_016863174 (OMIM: 611434) PREDICTED: cytokine-depend (399 aa)
initn: 382 init1: 266 opt: 358 Z-score: 173.7 bits: 41.4 E(85289): 0.0062
Smith-Waterman score: 377; 27.1% identity (52.3% similar) in 428 aa overlap (87-493:11-395)
60 70 80 90 100 110
pF1KB5 FPKLRVPILSKLSQEINKNEERRSIFTRKPQVPRFPEETESHEEDNGGWSSFEEDDYESP
:::: .. ... . : .... ... :
XP_016 MAELKIPLTRQVPRTMNRQGNRKTTKEGSNDLKFQNFSLP
10 20 30 40
120 130 140 150 160
pF1KB5 ND---DQDGEDDGDYESPN------EEEEAPVED------DADYEPPPSNDEEALQN-SI
.. . . :.:. : :.. : : : : ::. : ::. :. .:
XP_016 KNRSWPRINSATGQYQRMNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKI
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB5 LPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPS
:::.:. .:. : : :. .. :.: : . .: :: :. .
XP_016 LPARPIKESE--YADTH-YFKVAMDTPLP-------LDTRTSISIGQPTWNTQTRLERVD
110 120 130 140 150
230 240 250 260 270
pF1KB5 R--SRNHKTAKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEH
. :.. .. .. . . :..: :: : : .:: :: .: :
XP_016 KPISKDVRSQNIKGDASVRKNKIPL-----PPPRPLITLPKKY----QPLPPE-------
160 170 180 190
280 290 300 310 320 330
pF1KB5 LPKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMS
:. ..::: ..:: : : . . :. .: .. . .:. : :
XP_016 -PESSRPPL---SQRHTF--------PEVQRMPSQISLRDLSEV-LEAEKVPHNQRKPES
200 210 220 230 240
340 350 360 370 380 390
pF1KB5 SNTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNF
.. . ...:. :. :: . : .: . . ... : : .:: ..
XP_016 THLLENQNTQEIPLAISSSSFTTSNHSVQNRD--HRGGMQPCSPQ--RCQPPASCSPHEN
250 260 270 280 290
400 410 420 430 440 450
pF1KB5 PLPLPNKP-RPPSP--AEEENSLNEEWYVSYITRPEAEAALRKINQDGTFLVRDSSKKTT
:: ::: : ..... ..:::.. .: .: :. : :.::.::::: : :.
XP_016 ILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLVRDCSTKSK
300 310 320 330 340 350
460 470 480 490 500 510
pF1KB5 TNPYVLMVLYKDKVYNIQIRYQKESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDG
.:::: :.:..::::..::. ...: . ::::::: :
XP_016 EEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEVGIT
360 370 380 390
520 530
pF1KB5 KNRGSRYQCTLTHAAGYP
533 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 15:34:44 2016 done: Sat Nov 5 15:34:46 2016
Total Scan time: 12.760 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]