Result of FASTA (omim) for
pFN21AB9387
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9387, 288 aa
1>>>pF1KB9387 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7578+/-0.00052; mu= 5.6926+/- 0.032
mean_var=205.1407+/-40.743, 0's: 0 Z-trim(113.0): 86 B-trim: 311 in 1/56
Lambda= 0.089546
statistics sampled from 22053 (22131) to 22053 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.607), E-opt: 0.2 (0.259), width: 16
Scan time: 7.170
The best scores are: opt bits E(85289)
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo ( 288) 1815 247.2 2.8e-65
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282) 1752 239.0 7.6e-63
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288) 1543 212.0 1e-54
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287) 1202 168.0 1.9e-41
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288) 1196 167.2 3.3e-41
NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 ( 251) 1184 165.6 8.7e-41
XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A ( 329) 1184 165.7 1e-40
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 ( 319) 1173 164.3 2.7e-40
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 1167 163.5 4.7e-40
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 1167 163.5 4.7e-40
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2 ( 277) 1146 160.7 2.8e-39
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 ( 287) 1130 158.7 1.2e-38
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2 ( 309) 1117 157.0 4e-38
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2 ( 317) 1113 156.5 5.9e-38
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2 ( 260) 1108 155.8 8e-38
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 1106 155.6 1e-37
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 1106 155.6 1e-37
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3 ( 289) 1078 152.0 1.3e-36
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289) 1078 152.0 1.3e-36
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1054 148.9 1.1e-35
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1054 148.9 1.1e-35
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1054 148.9 1.1e-35
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1054 148.9 1.1e-35
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277) 1025 145.1 1.4e-34
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3 ( 269) 1001 142.0 1.2e-33
XP_005274257 (OMIM: 600876) PREDICTED: syntaxin-3 ( 252) 854 123.0 5.9e-28
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2 ( 213) 831 119.9 4.1e-27
XP_016873684 (OMIM: 600876) PREDICTED: syntaxin-3 ( 244) 830 119.9 5e-27
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2 ( 214) 825 119.2 7.1e-27
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3 ( 192) 781 113.4 3.4e-25
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297) 764 111.4 2.1e-24
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4 ( 293) 741 108.4 1.6e-23
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295) 741 108.4 1.6e-23
XP_016874477 (OMIM: 132350) PREDICTED: syntaxin-2 ( 167) 651 96.6 3.5e-20
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219) 648 96.3 5.5e-20
XP_016874475 (OMIM: 132350) PREDICTED: syntaxin-2 ( 200) 627 93.5 3.4e-19
XP_016874476 (OMIM: 132350) PREDICTED: syntaxin-2 ( 199) 622 92.9 5.3e-19
XP_011534520 (OMIM: 603552,605014) PREDICTED: synt ( 287) 565 85.7 1.1e-16
XP_011534519 (OMIM: 603552,605014) PREDICTED: synt ( 287) 565 85.7 1.1e-16
XP_011534516 (OMIM: 603552,605014) PREDICTED: synt ( 287) 565 85.7 1.1e-16
XP_016866889 (OMIM: 603552,605014) PREDICTED: synt ( 287) 565 85.7 1.1e-16
NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo ( 287) 565 85.7 1.1e-16
XP_011534515 (OMIM: 603552,605014) PREDICTED: synt ( 313) 565 85.7 1.2e-16
XP_016873685 (OMIM: 600876) PREDICTED: syntaxin-3 ( 155) 557 84.4 1.5e-16
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4 ( 154) 479 74.3 1.6e-13
XP_016874478 (OMIM: 132350) PREDICTED: syntaxin-2 ( 159) 348 57.4 2e-08
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276) 305 52.1 1.4e-06
NP_001313507 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 283 49.2 9.7e-06
NP_003560 (OMIM: 603217) syntaxin-7 isoform a [Hom ( 261) 283 49.2 9.7e-06
NP_001313508 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 283 49.2 9.7e-06
>>NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo sapi (288 aa)
initn: 1815 init1: 1815 opt: 1815 Z-score: 1293.1 bits: 247.2 E(85289): 2.8e-65
Smith-Waterman score: 1815; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
190 200 210 220 230 240
250 260 270 280
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
250 260 270 280
>>XP_016878382 (OMIM: 601485,616172) PREDICTED: syntaxin (282 aa)
initn: 1752 init1: 1752 opt: 1752 Z-score: 1249.2 bits: 239.0 E(85289): 7.6e-63
Smith-Waterman score: 1752; 100.0% identity (100.0% similar) in 278 aa overlap (11-288:5-282)
10 20 30 40 50 60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPRAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
180 190 200 210 220 230
250 260 270 280
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
240 250 260 270 280
>>NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Homo s (288 aa)
initn: 1461 init1: 1461 opt: 1543 Z-score: 1103.2 bits: 212.0 E(85289): 1e-54
Smith-Waterman score: 1543; 84.2% identity (96.8% similar) in 285 aa overlap (1-284:1-285)
10 20 30 40 50
pF1KB9 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
:::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
NP_004 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
:::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
NP_004 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
:::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::..
NP_004 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
: :::...::::.::::::.::::::.:::::::::.::::::::::::::::::::::.
NP_004 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
190 200 210 220 230 240
240 250 260 270 280
pF1KB9 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
:::::::::::::::::::::::::::::::::.::.:.::..::
NP_004 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA
250 260 270 280
>>NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Homo sa (287 aa)
initn: 1202 init1: 1202 opt: 1202 Z-score: 865.1 bits: 168.0 E(85289): 1.9e-41
Smith-Waterman score: 1202; 64.7% identity (88.5% similar) in 286 aa overlap (1-282:1-286)
10 20 30 40 50 60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
:.:: .: . . .:: . :: :..:::::.::.::::::. :.:... ::.:::.:: :
NP_001 MRDRLPDLTACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYVEEVKKNHSII
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
:.::::. : :.:::::. .:::::::.:.::::::::..:.:. ::.:.:::::.::::
NP_001 LSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQHS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
.:::::::.:.::: .:. .:.: : ::::::::::::::..:::.:::::: .:::.::
NP_001 VLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSDI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
:::.:.:::::::.::..:.::::::::::.::.::::.::.:::::. :: :: ...
NP_001 ISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNAT
190 200 210 220 230 240
250 260 270 280
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL----GVVLASSIGGTLGL
::::.: .::::.::::::::: ..:::: .:: :..::...
NP_001 DYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILATTLS
250 260 270 280
>>NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Homo sa (288 aa)
initn: 1239 init1: 1186 opt: 1196 Z-score: 860.9 bits: 167.2 E(85289): 3.3e-41
Smith-Waterman score: 1196; 64.8% identity (87.8% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
:.:: .: . . .:: . :: :..:::::.::.::::::. :.:... ::.:::.:: :
NP_919 MRDRLPDLTACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYVEEVKKNHSII
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
:.::::. : :.:::::. .:::::::.:.::::::::..:.:. ::.:.:::::.::::
NP_919 LSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQHS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
.:::::::.:.::: .:. .:.: : ::::::::::::::..:::.:::::: .:::.::
NP_919 VLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSDI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
:::.:.:::::::.::..:.::::::::::.::.::::.::.:::::. :: :: ...
NP_919 ISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNAT
190 200 210 220 230 240
250 260 270 280
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
::::.: .::::.:::::::::: .:: ::: ...: :: ..:
NP_919 DYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALIIGLSVGK
250 260 270 280
>>NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 [Hom (251 aa)
initn: 1102 init1: 1102 opt: 1184 Z-score: 853.3 bits: 165.6 E(85289): 8.7e-41
Smith-Waterman score: 1184; 82.7% identity (96.0% similar) in 226 aa overlap (1-225:1-226)
10 20 30 40 50
pF1KB9 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
:::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
NP_001 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
:::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
NP_001 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
:::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::..
NP_001 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
: :::...::::.::::::.::::::.:::::::::.:::::::::
NP_001 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQTMWRGPCLTPRRPS
190 200 210 220 230 240
240 250 260 270 280
pF1KB9 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NP_001 STRARRAGRKS
250
>>XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A iso (329 aa)
initn: 1102 init1: 1102 opt: 1184 Z-score: 851.8 bits: 165.7 E(85289): 1e-40
Smith-Waterman score: 1184; 82.7% identity (96.0% similar) in 226 aa overlap (1-225:1-226)
10 20 30 40 50
pF1KB9 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
:::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
XP_016 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
:::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
XP_016 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
:::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::..
XP_016 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
: :::...::::.::::::.::::::.:::::::::.:::::::::
XP_016 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQVSAGPPCPPLQPTP
190 200 210 220 230 240
240 250 260 270 280
pF1KB9 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
XP_016 APRAALTSPFLPDTLPCRGGTKFSGNQSPAVETAARALPTRRSLSSAWLCLSFKDPRPCM
250 260 270 280 290 300
>>XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 isof (319 aa)
initn: 1173 init1: 1173 opt: 1173 Z-score: 844.3 bits: 164.3 E(85289): 2.7e-40
Smith-Waterman score: 1173; 65.8% identity (89.5% similar) in 275 aa overlap (12-282:44-318)
10 20 30 40
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRG
. .:: . :: :..:::::.::.::::::.
XP_016 SAFSGQMHTVICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRN
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB9 CIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQ
:.:... ::.:::.:: ::.::::. : :.:::::. .:::::::.:.::::::::..:
XP_016 SIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQ
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB9 EEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
.:. ::.:.:::::.::::.:::::::.:.::: .:. .:.: : ::::::::::::::.
XP_016 DESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB9 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
.:::.:::::: .:::.:: :::.:.:::::::.::..:.::::::::::.::.::::.
XP_016 DELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMF
200 210 220 230 240 250
230 240 250 260 270
pF1KB9 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL----GVV
::.:::::. :: :: ...::::.: .::::.::::::::: ..:::: .:: :..
XP_016 VETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGII
260 270 280 290 300 310
280
pF1KB9 LASSIGGTLGL
::...
XP_016 LATTLS
>>XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 isof (320 aa)
initn: 1217 init1: 1164 opt: 1167 Z-score: 840.1 bits: 163.5 E(85289): 4.7e-40
Smith-Waterman score: 1167; 65.9% identity (88.8% similar) in 276 aa overlap (12-287:44-319)
10 20 30 40
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRG
. .:: . :: :..:::::.::.::::::.
XP_016 SAFSGQMHTVICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRN
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB9 CIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQ
:.:... ::.:::.:: ::.::::. : :.:::::. .:::::::.:.::::::::..:
XP_016 SIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQ
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB9 EEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
.:. ::.:.:::::.::::.:::::::.:.::: .:. .:.: : ::::::::::::::.
XP_016 DESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB9 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
.:::.:::::: .:::.:: :::.:.:::::::.::..:.::::::::::.::.::::.
XP_016 DELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMF
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB9 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASS
::.:::::. :: :: ...::::.: .::::.:::::::::: .:: ::: ...:
XP_016 VETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALI
260 270 280 290 300 310
pF1KB9 IGGTLGL
:: ..:
XP_016 IGLSVGK
320
>>XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 isof (320 aa)
initn: 1217 init1: 1164 opt: 1167 Z-score: 840.1 bits: 163.5 E(85289): 4.7e-40
Smith-Waterman score: 1167; 65.9% identity (88.8% similar) in 276 aa overlap (12-287:44-319)
10 20 30 40
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRG
. .:: . :: :..:::::.::.::::::.
XP_016 SAFSGQMHTVICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRN
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB9 CIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQ
:.:... ::.:::.:: ::.::::. : :.:::::. .:::::::.:.::::::::..:
XP_016 SIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQ
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB9 EEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
.:. ::.:.:::::.::::.:::::::.:.::: .:. .:.: : ::::::::::::::.
XP_016 DESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB9 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
.:::.:::::: .:::.:: :::.:.:::::::.::..:.::::::::::.::.::::.
XP_016 DELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMF
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB9 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASS
::.:::::. :: :: ...::::.: .::::.:::::::::: .:: ::: ...:
XP_016 VETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALI
260 270 280 290 300 310
pF1KB9 IGGTLGL
:: ..:
XP_016 IGLSVGK
320
288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:18:21 2016 done: Sat Nov 5 13:18:22 2016
Total Scan time: 7.170 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]