Result of FASTA (omim) for
pFN21AB6107
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6107, 580 aa
1>>>pF1KB6107 580 - 580 aa - 580 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3583+/-0.00035; mu= 14.4740+/- 0.022
mean_var=115.8217+/-23.298, 0's: 0 Z-trim(117.0): 90 B-trim: 46 in 1/53
Lambda= 0.119173
statistics sampled from 28570 (28701) to 28570 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.337), width: 16
Scan time: 10.840
The best scores are: opt bits E(85289)
XP_011516811 (OMIM: 609740) PREDICTED: PHD finger ( 580) 4028 703.9 3.8e-202
XP_016870101 (OMIM: 609740) PREDICTED: PHD finger ( 580) 4028 703.9 3.8e-202
XP_005251963 (OMIM: 609740) PREDICTED: PHD finger ( 580) 4028 703.9 3.8e-202
NP_056466 (OMIM: 609740) PHD finger protein 19 iso ( 580) 4028 703.9 3.8e-202
NP_001273769 (OMIM: 609740) PHD finger protein 19 ( 599) 4028 703.9 3.9e-202
XP_011516813 (OMIM: 609740) PREDICTED: PHD finger ( 473) 3072 539.4 9.7e-153
XP_011516817 (OMIM: 609740) PREDICTED: PHD finger ( 422) 2696 474.7 2.6e-133
XP_011516818 (OMIM: 609740) PREDICTED: PHD finger ( 388) 2633 463.9 4.4e-130
XP_016870102 (OMIM: 609740) PREDICTED: PHD finger ( 443) 2633 463.9 4.9e-130
NP_001273771 (OMIM: 609740) PHD finger protein 19 ( 371) 2530 446.1 9.1e-125
NP_031384 (OMIM: 609882) metal-response element-bi ( 593) 1673 299.0 2.9e-80
NP_001157865 (OMIM: 609882) metal-response element ( 491) 1432 257.5 7.6e-68
XP_011539318 (OMIM: 609882) PREDICTED: metal-respo ( 491) 1432 257.5 7.6e-68
XP_016856165 (OMIM: 609882) PREDICTED: metal-respo ( 491) 1432 257.5 7.6e-68
NP_001157863 (OMIM: 609882) metal-response element ( 491) 1432 257.5 7.6e-68
XP_011512965 (OMIM: 602881) PREDICTED: PHD finger ( 566) 1411 253.9 1e-66
NP_077084 (OMIM: 602881) PHD finger protein 1 isof ( 567) 1409 253.6 1.3e-66
XP_011512964 (OMIM: 602881) PREDICTED: PHD finger ( 567) 1409 253.6 1.3e-66
XP_011512968 (OMIM: 602881) PREDICTED: PHD finger ( 498) 1309 236.3 1.8e-61
XP_011512967 (OMIM: 602881) PREDICTED: PHD finger ( 499) 1309 236.3 1.8e-61
XP_011512972 (OMIM: 602881) PREDICTED: PHD finger ( 415) 1300 234.7 4.5e-61
XP_011512971 (OMIM: 602881) PREDICTED: PHD finger ( 429) 1300 234.7 4.7e-61
NP_002627 (OMIM: 602881) PHD finger protein 1 isof ( 457) 1300 234.7 4.9e-61
NP_001157864 (OMIM: 609882) metal-response element ( 536) 1274 230.3 1.2e-59
XP_011539319 (OMIM: 609882) PREDICTED: metal-respo ( 331) 1179 213.8 7e-55
NP_001009936 (OMIM: 609740) PHD finger protein 19 ( 207) 1103 200.6 4.2e-51
XP_016856167 (OMIM: 609882) PREDICTED: metal-respo ( 434) 1033 188.8 3.1e-47
XP_016856166 (OMIM: 609882) PREDICTED: metal-respo ( 434) 1033 188.8 3.1e-47
NP_001273772 (OMIM: 609740) PHD finger protein 19 ( 130) 850 156.9 3.7e-38
XP_011512966 (OMIM: 602881) PREDICTED: PHD finger ( 535) 682 128.5 5.3e-29
XP_016856168 (OMIM: 609882) PREDICTED: metal-respo ( 320) 508 98.5 3.7e-20
XP_011539321 (OMIM: 609882) PREDICTED: metal-respo ( 320) 508 98.5 3.7e-20
>>XP_011516811 (OMIM: 609740) PREDICTED: PHD finger prot (580 aa)
initn: 4028 init1: 4028 opt: 4028 Z-score: 3750.2 bits: 703.9 E(85289): 3.8e-202
Smith-Waterman score: 4028; 100.0% identity (100.0% similar) in 580 aa overlap (1-580:1-580)
10 20 30 40 50 60
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
490 500 510 520 530 540
550 560 570 580
pF1KB6 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
::::::::::::::::::::::::::::::::::::::::
XP_011 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
550 560 570 580
>>XP_016870101 (OMIM: 609740) PREDICTED: PHD finger prot (580 aa)
initn: 4028 init1: 4028 opt: 4028 Z-score: 3750.2 bits: 703.9 E(85289): 3.8e-202
Smith-Waterman score: 4028; 100.0% identity (100.0% similar) in 580 aa overlap (1-580:1-580)
10 20 30 40 50 60
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
490 500 510 520 530 540
550 560 570 580
pF1KB6 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
::::::::::::::::::::::::::::::::::::::::
XP_016 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
550 560 570 580
>>XP_005251963 (OMIM: 609740) PREDICTED: PHD finger prot (580 aa)
initn: 4028 init1: 4028 opt: 4028 Z-score: 3750.2 bits: 703.9 E(85289): 3.8e-202
Smith-Waterman score: 4028; 100.0% identity (100.0% similar) in 580 aa overlap (1-580:1-580)
10 20 30 40 50 60
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
490 500 510 520 530 540
550 560 570 580
pF1KB6 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
::::::::::::::::::::::::::::::::::::::::
XP_005 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
550 560 570 580
>>NP_056466 (OMIM: 609740) PHD finger protein 19 isoform (580 aa)
initn: 4028 init1: 4028 opt: 4028 Z-score: 3750.2 bits: 703.9 E(85289): 3.8e-202
Smith-Waterman score: 4028; 100.0% identity (100.0% similar) in 580 aa overlap (1-580:1-580)
10 20 30 40 50 60
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
490 500 510 520 530 540
550 560 570 580
pF1KB6 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
::::::::::::::::::::::::::::::::::::::::
NP_056 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
550 560 570 580
>>NP_001273769 (OMIM: 609740) PHD finger protein 19 isof (599 aa)
initn: 4028 init1: 4028 opt: 4028 Z-score: 3750.0 bits: 703.9 E(85289): 3.9e-202
Smith-Waterman score: 4028; 100.0% identity (100.0% similar) in 580 aa overlap (1-580:20-599)
10 20 30 40
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
:::::::::::::::::::::::::::::::::::::::::
NP_001 MLVLVIRGPYPSAQCQGKLMENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB6 DAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTS
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB6 LSYDSRWTVGSRKRKLAAKAYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSYDSRWTVGSRKRKLAAKAYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHT
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB6 FESISEDDSSLSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FESISEDDSSLSHLKSSITNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
550 560 570 580 590
>>XP_011516813 (OMIM: 609740) PREDICTED: PHD finger prot (473 aa)
initn: 3072 init1: 3072 opt: 3072 Z-score: 2863.1 bits: 539.4 E(85289): 9.7e-153
Smith-Waterman score: 3072; 100.0% identity (100.0% similar) in 434 aa overlap (1-434:20-453)
10 20 30 40
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
:::::::::::::::::::::::::::::::::::::::::
XP_011 MLVLVIRGPYPSAQCQGKLMENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB6 DAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTS
:::::::::::::::::::::::::::::::::
XP_011 DAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKRCRLHRRCQHLWLCLHQPLL
430 440 450 460 470
470 480 490 500 510 520
pF1KB6 LSYDSRWTVGSRKRKLAAKAYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHT
>>XP_011516817 (OMIM: 609740) PREDICTED: PHD finger prot (422 aa)
initn: 2719 init1: 2696 opt: 2696 Z-score: 2514.4 bits: 474.7 E(85289): 2.6e-133
Smith-Waterman score: 2696; 99.7% identity (100.0% similar) in 378 aa overlap (1-378:20-397)
10 20 30 40
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
:::::::::::::::::::::::::::::::::::::::::
XP_011 MLVLVIRGPYPSAQCQGKLMENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLE
::::::::::::::::::::::::::::::::::::.
XP_011 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGVTSPQPGAPTTTWLAYLTSRWMKF
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB6 DAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTS
XP_011 KV
>>XP_011516818 (OMIM: 609740) PREDICTED: PHD finger prot (388 aa)
initn: 2656 init1: 2633 opt: 2633 Z-score: 2456.4 bits: 463.9 E(85289): 4.4e-130
Smith-Waterman score: 2633; 99.7% identity (100.0% similar) in 369 aa overlap (1-369:20-388)
10 20 30 40
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
:::::::::::::::::::::::::::::::::::::::::
XP_011 MLVLVIRGPYPSAQCQGKLMENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 RVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLE
:::::::::::::::::::::::::::.
XP_011 RVPPNPPGKLLPDKGLLPNENSASSELQ
370 380
>>XP_016870102 (OMIM: 609740) PREDICTED: PHD finger prot (443 aa)
initn: 2632 init1: 2632 opt: 2633 Z-score: 2455.6 bits: 463.9 E(85289): 4.9e-130
Smith-Waterman score: 2633; 90.6% identity (94.0% similar) in 416 aa overlap (1-413:20-430)
10 20 30 40
pF1KB6 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
:::::::::::::::::::::::::::::::::::::::::
XP_016 MLVLVIRGPYPSAQCQGKLMENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFH
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FEEILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRI
310 320 330 340 350 360
350 360 370 380 390
pF1KB6 RVPPNPPGKLLPDKGLLPNENSASSELR---KRGKSKPGLLPHEFQQQKRRVYRRKRSKF
::::::::::::::::::::::::::: ..:. : :: ..: . . :
XP_016 RVPPNPPGKLLPDKGLLPNENSASSELLCCLTNSSSRKG----EFIEEKDQSFCWKMLFP
370 380 390 400 410
400 410 420 430 440 450
pF1KB6 LLEDAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSA
.. . :.. :..:
XP_016 VVTSPQPGAP-TTTWLAYLTSRWMKFKV
420 430 440
>>NP_001273771 (OMIM: 609740) PHD finger protein 19 isof (371 aa)
initn: 2530 init1: 2530 opt: 2530 Z-score: 2360.9 bits: 446.1 E(85289): 9.1e-125
Smith-Waterman score: 2530; 100.0% identity (100.0% similar) in 371 aa overlap (210-580:1-371)
180 190 200 210 220 230
pF1KB6 PEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFY
::::::::::::::::::::::::::::::
NP_001 MLQCYRCRQWFHEACTQCLNEPMMFGDRFY
10 20 30
240 250 260 270 280 290
pF1KB6 LFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLG
40 50 60 70 80 90
300 310 320 330 340 350
pF1KB6 KLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLP
100 110 120 130 140 150
360 370 380 390 400 410
pF1KB6 NENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHL
160 170 180 190 200 210
420 430 440 450 460 470
pF1KB6 ASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAA
220 230 240 250 260 270
480 490 500 510 520 530
pF1KB6 KAYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSI
280 290 300 310 320 330
540 550 560 570 580
pF1KB6 TNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
:::::::::::::::::::::::::::::::::::::::::
NP_001 TNYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
340 350 360 370
580 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:54:47 2016 done: Sat Nov 5 10:54:49 2016
Total Scan time: 10.840 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]