Result of FASTA (omim) for
pFN21AB9700
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9700, 296 aa
1>>>pF1KB9700 296 - 296 aa - 296 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3676+/-0.000535; mu= 12.6973+/- 0.033
mean_var=263.1475+/-49.505, 0's: 0 Z-trim(116.1): 2036 B-trim: 128 in 1/56
Lambda= 0.079063
statistics sampled from 24777 (27088) to 24777 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.318), width: 16
Scan time: 7.460
The best scores are: opt bits E(85289)
XP_016879131 (OMIM: 601473) PREDICTED: zinc finger ( 296) 2080 250.6 2.8e-66
XP_011520949 (OMIM: 601473) PREDICTED: zinc finger ( 296) 2080 250.6 2.8e-66
NP_694573 (OMIM: 601473) zinc finger protein 75A i ( 296) 2080 250.6 2.8e-66
NP_001310970 (OMIM: 601473) zinc finger protein 75 ( 537) 2080 251.0 3.7e-66
NP_001289038 (OMIM: 601473) zinc finger protein 75 ( 537) 2080 251.0 3.7e-66
XP_011520948 (OMIM: 601473) PREDICTED: zinc finger ( 500) 1607 197.0 6.3e-50
XP_005262528 (OMIM: 314997) PREDICTED: zinc finger ( 303) 1229 153.5 4.7e-37
XP_016885309 (OMIM: 314997) PREDICTED: zinc finger ( 339) 1229 153.6 4.9e-37
XP_011529699 (OMIM: 314997) PREDICTED: zinc finger ( 339) 1229 153.6 4.9e-37
XP_011529698 (OMIM: 314997) PREDICTED: zinc finger ( 342) 1229 153.6 4.9e-37
XP_011529697 (OMIM: 314997) PREDICTED: zinc finger ( 360) 1229 153.7 5.1e-37
XP_016885307 (OMIM: 314997) PREDICTED: zinc finger ( 364) 1229 153.7 5.1e-37
XP_016885308 (OMIM: 314997) PREDICTED: zinc finger ( 376) 1229 153.7 5.2e-37
NP_001171992 (OMIM: 314997) zinc finger protein 75 ( 415) 1229 153.8 5.4e-37
XP_011529693 (OMIM: 314997) PREDICTED: zinc finger ( 510) 1229 153.9 6e-37
NP_009062 (OMIM: 314997) zinc finger protein 75D i ( 510) 1229 153.9 6e-37
XP_005262526 (OMIM: 314997) PREDICTED: zinc finger ( 510) 1229 153.9 6e-37
NP_003443 (OMIM: 603132) zinc finger protein 189 i ( 626) 737 97.9 5.2e-20
NP_001265160 (OMIM: 603132) zinc finger protein 18 ( 612) 722 96.2 1.7e-19
NP_066574 (OMIM: 194500) zinc finger protein 2 iso ( 425) 713 94.9 2.9e-19
NP_001278534 (OMIM: 194500) zinc finger protein 2 ( 438) 708 94.4 4.3e-19
NP_001265161 (OMIM: 603132) zinc finger protein 18 ( 611) 710 94.8 4.4e-19
NP_775802 (OMIM: 603982) zinc finger protein 100 [ ( 542) 705 94.2 6.1e-19
NP_003442 (OMIM: 601276) zinc finger protein 177 i ( 321) 669 89.7 8.1e-18
XP_005272399 (OMIM: 601262) PREDICTED: zinc finger ( 542) 659 88.9 2.3e-17
XP_011515600 (OMIM: 601262) PREDICTED: zinc finger ( 682) 659 89.1 2.6e-17
NP_001025147 (OMIM: 601262) zinc finger protein 16 ( 682) 659 89.1 2.6e-17
NP_008889 (OMIM: 601262) zinc finger protein 16 [H ( 682) 659 89.1 2.6e-17
XP_005272398 (OMIM: 601262) PREDICTED: zinc finger ( 682) 659 89.1 2.6e-17
XP_006716719 (OMIM: 194531) PREDICTED: zinc finger ( 590) 652 88.2 4.2e-17
NP_001269726 (OMIM: 194531) zinc finger protein 7 ( 590) 652 88.2 4.2e-17
XP_011515599 (OMIM: 194531) PREDICTED: zinc finger ( 590) 652 88.2 4.2e-17
XP_006716717 (OMIM: 194531) PREDICTED: zinc finger ( 590) 652 88.2 4.2e-17
XP_011540503 (OMIM: 611703) PREDICTED: zinc finger ( 452) 650 87.8 4.3e-17
NP_085137 (OMIM: 611703) zinc finger protein 436 [ ( 470) 650 87.8 4.4e-17
NP_001070663 (OMIM: 611703) zinc finger protein 43 ( 470) 650 87.8 4.4e-17
XP_011515598 (OMIM: 194531) PREDICTED: zinc finger ( 685) 652 88.3 4.6e-17
XP_011515597 (OMIM: 194531) PREDICTED: zinc finger ( 685) 652 88.3 4.6e-17
XP_011515595 (OMIM: 194531) PREDICTED: zinc finger ( 686) 652 88.3 4.6e-17
XP_011515596 (OMIM: 194531) PREDICTED: zinc finger ( 686) 652 88.3 4.6e-17
NP_003407 (OMIM: 194531) zinc finger protein 7 iso ( 686) 652 88.3 4.6e-17
XP_011515594 (OMIM: 194531) PREDICTED: zinc finger ( 697) 652 88.3 4.6e-17
NP_001269724 (OMIM: 194531) zinc finger protein 7 ( 697) 652 88.3 4.6e-17
XP_016869302 (OMIM: 194531) PREDICTED: zinc finger ( 702) 652 88.3 4.6e-17
XP_011515593 (OMIM: 194531) PREDICTED: zinc finger ( 703) 652 88.3 4.6e-17
XP_016869304 (OMIM: 194531) PREDICTED: zinc finger ( 706) 652 88.3 4.6e-17
XP_016869303 (OMIM: 194531) PREDICTED: zinc finger ( 707) 652 88.3 4.6e-17
NP_001017396 (OMIM: 194500) zinc finger protein 2 ( 383) 642 86.7 7.5e-17
NP_008892 (OMIM: 194525) zinc finger protein 19 [H ( 458) 643 87.0 7.6e-17
NP_001291968 (OMIM: 194522) zinc finger protein 33 ( 666) 641 87.0 1.1e-16
>>XP_016879131 (OMIM: 601473) PREDICTED: zinc finger pro (296 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1311.0 bits: 250.6 E(85289): 2.8e-66
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETVISLALFVLPKPKVISCLEQGEEPWVQVSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYFSQEEWELLDPTQKALYNDVMQENYETVISLALFVLPKPKVISCLEQGEEPWVQVSPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FKDSAGKSPTGLKLKNDTENHQPVSLSDLEIQASAGVISKKAKVKVPQKTAGKENHFDMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKDSAGKSPTGLKLKNDTENHQPVSLSDLEIQASAGVISKKAKVKVPQKTAGKENHFDMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDCAREKPFKCQECGKTFRVSSDLIKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDCAREKPFKCQECGKTFRVSSDLIKHQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 RIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIKPYKCSWCGKSFSQNTNLHTHQRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIKPYKCSWCGKSFSQNTNLHTHQRTHT
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 GEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTCSICRRNFSRRSSLLRHQKLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTCSICRRNFSRRSSLLRHQKLHL
250 260 270 280 290
>>XP_011520949 (OMIM: 601473) PREDICTED: zinc finger pro (296 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1311.0 bits: 250.6 E(85289): 2.8e-66
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETVISLALFVLPKPKVISCLEQGEEPWVQVSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYFSQEEWELLDPTQKALYNDVMQENYETVISLALFVLPKPKVISCLEQGEEPWVQVSPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FKDSAGKSPTGLKLKNDTENHQPVSLSDLEIQASAGVISKKAKVKVPQKTAGKENHFDMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FKDSAGKSPTGLKLKNDTENHQPVSLSDLEIQASAGVISKKAKVKVPQKTAGKENHFDMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDCAREKPFKCQECGKTFRVSSDLIKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDCAREKPFKCQECGKTFRVSSDLIKHQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 RIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIKPYKCSWCGKSFSQNTNLHTHQRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIKPYKCSWCGKSFSQNTNLHTHQRTHT
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 GEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTCSICRRNFSRRSSLLRHQKLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTCSICRRNFSRRSSLLRHQKLHL
250 260 270 280 290
>>NP_694573 (OMIM: 601473) zinc finger protein 75A isofo (296 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1311.0 bits: 250.6 E(85289): 2.8e-66
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296)
10 20 30 40 50 60
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETVISLALFVLPKPKVISCLEQGEEPWVQVSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 MYFSQEEWELLDPTQKALYNDVMQENYETVISLALFVLPKPKVISCLEQGEEPWVQVSPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FKDSAGKSPTGLKLKNDTENHQPVSLSDLEIQASAGVISKKAKVKVPQKTAGKENHFDMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 FKDSAGKSPTGLKLKNDTENHQPVSLSDLEIQASAGVISKKAKVKVPQKTAGKENHFDMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDCAREKPFKCQECGKTFRVSSDLIKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 RVGKWHQDFPVKKRKKLSTWKQELLKLMDRHKKDCAREKPFKCQECGKTFRVSSDLIKHQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 RIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIKPYKCSWCGKSFSQNTNLHTHQRTHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 RIHTEEKPYKCQQCDKRFRWSSDLNKHLTTHQGIKPYKCSWCGKSFSQNTNLHTHQRTHT
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 GEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTCSICRRNFSRRSSLLRHQKLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 GEKPFTCHECGKKFSQNSHLIKHRRTHTGEQPYTCSICRRNFSRRSSLLRHQKLHL
250 260 270 280 290
>>NP_001310970 (OMIM: 601473) zinc finger protein 75A is (537 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1308.7 bits: 251.0 E(85289): 3.7e-66
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:242-537)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
::::::::::::::::::::::::::::::
NP_001 PEQTNTKDWTVTPEHVLPESQSLLTFEEVAMYFSQEEWELLDPTQKALYNDVMQENYETV
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
280 290 300 310 320 330
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
340 350 360 370 380 390
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
400 410 420 430 440 450
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
460 470 480 490 500 510
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::::::::::::::::::::::
NP_001 QPYTCSICRRNFSRRSSLLRHQKLHL
520 530
>>NP_001289038 (OMIM: 601473) zinc finger protein 75A is (537 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1308.7 bits: 251.0 E(85289): 3.7e-66
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:242-537)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
::::::::::::::::::::::::::::::
NP_001 PEQTNTKDWTVTPEHVLPESQSLLTFEEVAMYFSQEEWELLDPTQKALYNDVMQENYETV
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
280 290 300 310 320 330
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
340 350 360 370 380 390
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
400 410 420 430 440 450
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
460 470 480 490 500 510
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::::::::::::::::::::::
NP_001 QPYTCSICRRNFSRRSSLLRHQKLHL
520 530
>>XP_011520948 (OMIM: 601473) PREDICTED: zinc finger pro (500 aa)
initn: 1607 init1: 1607 opt: 1607 Z-score: 1017.4 bits: 197.0 E(85289): 6.3e-50
Smith-Waterman score: 1741; 87.5% identity (87.5% similar) in 296 aa overlap (1-296:242-500)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
::::::::::::::::::::::::::::::
XP_011 PEQTNTKDWTVTPEHVLPESQSLLTFEEVAMYFSQEEWELLDPTQKALYNDVMQENYETV
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::: ::::::::::::::::::::
XP_011 ISL-------------------------------------GLKLKNDTENHQPVSLSDLE
280 290
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
300 310 320 330 340 350
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
360 370 380 390 400 410
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
420 430 440 450 460 470
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::::::::::::::::::::::
XP_011 QPYTCSICRRNFSRRSSLLRHQKLHL
480 490 500
>>XP_005262528 (OMIM: 314997) PREDICTED: zinc finger pro (303 aa)
initn: 1229 init1: 1229 opt: 1229 Z-score: 786.3 bits: 153.5 E(85289): 4.7e-37
Smith-Waterman score: 1312; 66.4% identity (76.9% similar) in 295 aa overlap (1-295:35-292)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
.:::.:::.::.: .:.:::::::. ::::
XP_005 SEQKRIKHWKMASKLILPESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::: :::::::: : .:.:.: :
XP_005 ISL-------------------------------------GLKLKNDTGNDHPISVSTSE
70 80
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::.:. .:::...:. ::: :.:: : : : :::. :: ::::: .: :::: ::::
XP_005 IQTSGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDL
90 100 110 120 130 140
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
: : . :::::::::::.::::::::::.:::: ::::::::::.:::::::::::. :
XP_005 HGKGPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMT
150 160 170 180 190 200
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
:::::::.:::::::::.::::::::: ::::::: : ::::.: ::::::::.::::::
XP_005 HQGIKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGE
210 220 230 240 250 260
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::.:.::::::::::::::::
XP_005 QPYTCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
270 280 290 300
>>XP_016885309 (OMIM: 314997) PREDICTED: zinc finger pro (339 aa)
initn: 1229 init1: 1229 opt: 1229 Z-score: 785.9 bits: 153.6 E(85289): 4.9e-37
Smith-Waterman score: 1312; 66.4% identity (76.9% similar) in 295 aa overlap (1-295:71-328)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
.:::.:::.::.: .:.:::::::. ::::
XP_016 GYYKNSWAGTLTKKPSLYMKESLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETV
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::: :::::::: : .:.:.: :
XP_016 ISL-------------------------------------GLKLKNDTGNDHPISVSTSE
110 120
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::.:. .:::...:. ::: :.:: : : : :::. :: ::::: .: :::: ::::
XP_016 IQTSGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
: : . :::::::::::.::::::::::.:::: ::::::::::.:::::::::::. :
XP_016 HGKGPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMT
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
:::::::.:::::::::.::::::::: ::::::: : ::::.: ::::::::.::::::
XP_016 HQGIKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGE
250 260 270 280 290 300
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::.:.::::::::::::::::
XP_016 QPYTCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
310 320 330
>>XP_011529699 (OMIM: 314997) PREDICTED: zinc finger pro (339 aa)
initn: 1229 init1: 1229 opt: 1229 Z-score: 785.9 bits: 153.6 E(85289): 4.9e-37
Smith-Waterman score: 1312; 66.4% identity (76.9% similar) in 295 aa overlap (1-295:71-328)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
.:::.:::.::.: .:.:::::::. ::::
XP_011 GYYKNSWAGTLTKKPSLYMKESLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETV
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::: :::::::: : .:.:.: :
XP_011 ISL-------------------------------------GLKLKNDTGNDHPISVSTSE
110 120
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::.:. .:::...:. ::: :.:: : : : :::. :: ::::: .: :::: ::::
XP_011 IQTSGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
: : . :::::::::::.::::::::::.:::: ::::::::::.:::::::::::. :
XP_011 HGKGPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMT
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
:::::::.:::::::::.::::::::: ::::::: : ::::.: ::::::::.::::::
XP_011 HQGIKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGE
250 260 270 280 290 300
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::.:.::::::::::::::::
XP_011 QPYTCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
310 320 330
>>XP_011529698 (OMIM: 314997) PREDICTED: zinc finger pro (342 aa)
initn: 1229 init1: 1229 opt: 1229 Z-score: 785.8 bits: 153.6 E(85289): 4.9e-37
Smith-Waterman score: 1312; 66.4% identity (76.9% similar) in 295 aa overlap (1-295:74-331)
10 20 30
pF1KB9 MYFSQEEWELLDPTQKALYNDVMQENYETV
.:::.:::.::.: .:.:::::::. ::::
XP_011 SEQKRIKHWKMASKLILPESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETV
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB9 ISLALFVLPKPKVISCLEQGEEPWVQVSPEFKDSAGKSPTGLKLKNDTENHQPVSLSDLE
::: :::::::: : .:.:.: :
XP_011 ISL-------------------------------------GLKLKNDTGNDHPISVSTSE
110 120
100 110 120 130 140 150
pF1KB9 IQASAGVISKKAKVKVPQKTAGKENHFDMHRVGKWHQDFPVKKRKKLSTWKQELLKLMDR
::.:. .:::...:. ::: :.:: : : : :::. :: ::::: .: :::: ::::
XP_011 IQTSGCEVSKKTRMKIAQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATCKQELPKLMDL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 HKKDCAREKPFKCQECGKTFRVSSDLIKHQRIHTEEKPYKCQQCDKRFRWSSDLNKHLTT
: : . :::::::::::.::::::::::.:::: ::::::::::.:::::::::::. :
XP_011 HGKGPTGEKPFKCQECGKSFRVSSDLIKHHRIHTGEKPYKCQQCDRRFRWSSDLNKHFMT
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 HQGIKPYKCSWCGKSFSQNTNLHTHQRTHTGEKPFTCHECGKKFSQNSHLIKHRRTHTGE
:::::::.:::::::::.::::::::: ::::::: : ::::.: ::::::::.::::::
XP_011 HQGIKPYRCSWCGKSFSHNTNLHTHQRIHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGE
250 260 270 280 290 300
280 290
pF1KB9 QPYTCSICRRNFSRRSSLLRHQKLHL
::::::.:.::::::::::::::::
XP_011 QPYTCSLCKRNFSRRSSLLRHQKLHRRREACLVSPN
310 320 330 340
296 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:24:56 2016 done: Fri Nov 4 18:24:57 2016
Total Scan time: 7.460 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]