Result of FASTA (omim) for
pFN21AB8861
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8861, 98 aa
1>>>pF1KB8861 98 - 98 aa - 98 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9977+/-0.00031; mu= 11.4017+/- 0.019
mean_var=64.9505+/-12.783, 0's: 0 Z-trim(116.2): 57 B-trim: 514 in 1/53
Lambda= 0.159141
statistics sampled from 27084 (27143) to 27084 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.318), width: 16
Scan time: 3.260
The best scores are: opt bits E(85289)
XP_011508166 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
XP_005245491 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
XP_016857523 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
XP_011508165 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
XP_011508164 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
XP_016857524 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
NP_001019382 (OMIM: 601989) protein S100-A13 [Homo ( 98) 614 148.8 1.3e-36
NP_001019383 (OMIM: 601989) protein S100-A13 [Homo ( 98) 614 148.8 1.3e-36
NP_001019384 (OMIM: 601989) protein S100-A13 [Homo ( 98) 614 148.8 1.3e-36
NP_005970 (OMIM: 601989) protein S100-A13 [Homo sa ( 98) 614 148.8 1.3e-36
XP_016857525 (OMIM: 601989) PREDICTED: protein S10 ( 98) 614 148.8 1.3e-36
NP_001019381 (OMIM: 601989) protein S100-A13 [Homo ( 98) 614 148.8 1.3e-36
NP_065723 (OMIM: 607986) protein S100-A14 [Homo sa ( 104) 237 62.3 1.6e-10
XP_005245419 (OMIM: 607986) PREDICTED: protein S10 ( 104) 237 62.3 1.6e-10
XP_016857364 (OMIM: 607986) PREDICTED: protein S10 ( 104) 237 62.3 1.6e-10
NP_006262 (OMIM: 176940) protein S100-A1 [Homo sap ( 94) 178 48.7 1.7e-06
XP_016857520 (OMIM: 176991) PREDICTED: protein S10 ( 92) 174 47.8 3.2e-06
NP_005612 (OMIM: 603112) protein S100-A12 [Homo sa ( 92) 174 47.8 3.2e-06
NP_002953 (OMIM: 176991) protein S100-A5 [Homo sap ( 92) 174 47.8 3.2e-06
XP_016857521 (OMIM: 176991) PREDICTED: protein S10 ( 92) 174 47.8 3.2e-06
NP_002956 (OMIM: 123886) protein S100-A9 [Homo sap ( 114) 175 48.1 3.3e-06
XP_011508162 (OMIM: 176991) PREDICTED: protein S10 ( 104) 174 47.8 3.5e-06
NP_005611 (OMIM: 603114) protein S100-A11 [Homo sa ( 105) 174 47.8 3.6e-06
XP_016857519 (OMIM: 176991) PREDICTED: protein S10 ( 110) 174 47.8 3.7e-06
XP_016857518 (OMIM: 176991) PREDICTED: protein S10 ( 133) 174 47.9 4.3e-06
NP_002952 (OMIM: 114210) protein S100-A4 [Homo sap ( 101) 162 45.0 2.3e-05
NP_062427 (OMIM: 114210) protein S100-A4 [Homo sap ( 101) 162 45.0 2.3e-05
NP_004048 (OMIM: 302020) protein S100-G [Homo sapi ( 79) 159 44.3 3.1e-05
XP_016885330 (OMIM: 302020) PREDICTED: protein S10 ( 79) 159 44.3 3.1e-05
NP_005971 (OMIM: 600614) protein S100-P [Homo sapi ( 95) 154 43.2 8e-05
NP_005969 (OMIM: 176993) protein S100-A2 [Homo sap ( 97) 153 43.0 9.5e-05
NP_006263 (OMIM: 176990) protein S100-B [Homo sapi ( 92) 152 42.7 0.00011
XP_016883913 (OMIM: 176990) PREDICTED: protein S10 ( 92) 152 42.7 0.00011
XP_016857522 (OMIM: 114110) PREDICTED: protein S10 ( 90) 147 41.6 0.00023
NP_055439 (OMIM: 114110) protein S100-A6 [Homo sap ( 90) 147 41.6 0.00023
XP_011541546 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
NP_570128 (OMIM: 610103) protein S100-Z [Homo sapi ( 99) 142 40.4 0.00055
XP_011541541 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_016864661 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_011541547 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_011541542 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_011541543 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_016864660 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_016864662 (OMIM: 610103) PREDICTED: protein S10 ( 99) 142 40.4 0.00055
XP_011507833 (OMIM: 616284) PREDICTED: filaggrin-2 (2239) 157 44.8 0.00061
NP_001014364 (OMIM: 616284) filaggrin-2 [Homo sapi (2391) 157 44.8 0.00064
NP_001009931 (OMIM: 616293) hornerin [Homo sapiens (2850) 150 43.3 0.0022
NP_001306130 (OMIM: 123885) protein S100-A8 isofor ( 93) 132 38.1 0.0026
NP_002955 (OMIM: 123885) protein S100-A8 isoform d ( 93) 132 38.1 0.0026
NP_001306127 (OMIM: 123885) protein S100-A8 isofor ( 101) 132 38.2 0.0028
>>XP_011508166 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
XP_011 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>XP_005245491 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
XP_005 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>XP_016857523 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
XP_016 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>XP_011508165 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
XP_011 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>XP_011508164 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
XP_011 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>XP_016857524 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
XP_016 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>NP_001019382 (OMIM: 601989) protein S100-A13 [Homo sap (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
NP_001 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>NP_001019383 (OMIM: 601989) protein S100-A13 [Homo sap (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
NP_001 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>NP_001019384 (OMIM: 601989) protein S100-A13 [Homo sap (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
NP_001 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
>>NP_005970 (OMIM: 601989) protein S100-A13 [Homo sapien (98 aa)
initn: 614 init1: 614 opt: 614 Z-score: 778.2 bits: 148.8 E(85289): 1.3e-36
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)
10 20 30 40 50 60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
10 20 30 40 50 60
70 80 90
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
::::::::::::::::::::::::::::::::::::::
NP_005 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
70 80 90
98 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:11:43 2016 done: Fri Nov 4 16:11:44 2016
Total Scan time: 3.260 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]