Result of FASTA (omim) for
pFN21AB8811
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8811, 362 aa
1>>>pF1KB8811 362 - 362 aa - 362 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4200+/-0.000417; mu= 15.9294+/- 0.026
mean_var=158.0921+/-43.365, 0's: 0 Z-trim(111.6): 552 B-trim: 0 in 0/53
Lambda= 0.102004
statistics sampled from 19520 (20259) to 19520 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.238), width: 16
Scan time: 6.940
The best scores are: opt bits E(85289)
NP_005273 (OMIM: 600551) G-protein coupled recepto ( 362) 2479 377.7 2.3e-104
XP_016882097 (OMIM: 600551) PREDICTED: G-protein c ( 362) 2479 377.7 2.3e-104
XP_016882096 (OMIM: 600551) PREDICTED: G-protein c ( 362) 2479 377.7 2.3e-104
NP_003476 (OMIM: 601404) ovarian cancer G-protein ( 365) 1112 176.5 8.3e-44
NP_001171147 (OMIM: 601404) ovarian cancer G-prote ( 365) 1112 176.5 8.3e-44
XP_005268167 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535499 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535498 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_006720325 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535501 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_005268168 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_005268169 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535500 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
NP_003599 (OMIM: 604620) psychosine receptor [Homo ( 337) 798 130.3 6.4e-30
NP_001265624 (OMIM: 606167) probable G-protein cou ( 371) 667 111.0 4.3e-24
NP_001265623 (OMIM: 606167) probable G-protein cou ( 380) 667 111.1 4.4e-24
NP_037477 (OMIM: 606167) probable G-protein couple ( 380) 667 111.1 4.4e-24
XP_016860005 (OMIM: 610376) PREDICTED: atypical ch ( 362) 540 92.3 1.8e-18
NP_064707 (OMIM: 610376) atypical chemokine recept ( 362) 540 92.3 1.8e-18
XP_005246154 (OMIM: 610376) PREDICTED: atypical ch ( 362) 540 92.3 1.8e-18
XP_005246155 (OMIM: 610376) PREDICTED: atypical ch ( 362) 540 92.3 1.8e-18
NP_001158194 (OMIM: 173393) platelet-activating fa ( 342) 529 90.7 5.3e-18
NP_001158195 (OMIM: 173393) platelet-activating fa ( 342) 529 90.7 5.3e-18
NP_001158193 (OMIM: 173393) platelet-activating fa ( 342) 529 90.7 5.3e-18
NP_000943 (OMIM: 173393) platelet-activating facto ( 342) 529 90.7 5.3e-18
NP_001155969 (OMIM: 278150,609239) lysophosphatidi ( 344) 525 90.1 8.1e-18
NP_001155970 (OMIM: 278150,609239) lysophosphatidi ( 344) 525 90.1 8.1e-18
NP_005758 (OMIM: 278150,609239) lysophosphatidic a ( 344) 525 90.1 8.1e-18
NP_001264929 (OMIM: 300086) lysophosphatidic acid ( 370) 517 89.0 1.9e-17
NP_005287 (OMIM: 300086) lysophosphatidic acid rec ( 370) 517 89.0 1.9e-17
XP_005262183 (OMIM: 300086) PREDICTED: lysophospha ( 370) 517 89.0 1.9e-17
XP_016884926 (OMIM: 300086) PREDICTED: lysophospha ( 370) 517 89.0 1.9e-17
XP_016884927 (OMIM: 300086) PREDICTED: lysophospha ( 370) 517 89.0 1.9e-17
XP_006724702 (OMIM: 300086) PREDICTED: lysophospha ( 370) 517 89.0 1.9e-17
NP_001154888 (OMIM: 603071) uracil nucleotide/cyst ( 339) 507 87.4 5e-17
NP_001154889 (OMIM: 603071) uracil nucleotide/cyst ( 339) 507 87.4 5e-17
XP_016859322 (OMIM: 603071) PREDICTED: uracil nucl ( 367) 507 87.5 5.2e-17
NP_001154887 (OMIM: 603071) uracil nucleotide/cyst ( 367) 507 87.5 5.2e-17
NP_005282 (OMIM: 603071) uracil nucleotide/cystein ( 367) 507 87.5 5.2e-17
XP_016864712 (OMIM: 600933) PREDICTED: proteinase- ( 383) 506 87.4 5.9e-17
NP_005233 (OMIM: 600933) proteinase-activated rece ( 397) 506 87.4 6.1e-17
NP_002554 (OMIM: 601167) P2Y purinoceptor 1 [Homo ( 373) 500 86.5 1.1e-16
XP_016875894 (OMIM: 605741) PREDICTED: G-protein c ( 361) 484 84.1 5.4e-16
NP_004942 (OMIM: 605741) G-protein coupled recepto ( 361) 484 84.1 5.4e-16
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 475 82.8 1.3e-15
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 471 82.2 2e-15
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 471 82.2 2e-15
NP_002555 (OMIM: 600041) P2Y purinoceptor 2 [Homo ( 377) 464 81.2 4.3e-15
NP_788085 (OMIM: 600041) P2Y purinoceptor 2 [Homo ( 377) 464 81.2 4.3e-15
NP_788086 (OMIM: 600041) P2Y purinoceptor 2 [Homo ( 377) 464 81.2 4.3e-15
>>NP_005273 (OMIM: 600551) G-protein coupled receptor 4 (362 aa)
initn: 2479 init1: 2479 opt: 2479 Z-score: 1994.8 bits: 377.7 E(85289): 2.3e-104
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)
10 20 30 40 50 60
pF1KB8 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
310 320 330 340 350 360
pF1KB8 AQ
::
NP_005 AQ
>>XP_016882097 (OMIM: 600551) PREDICTED: G-protein coupl (362 aa)
initn: 2479 init1: 2479 opt: 2479 Z-score: 1994.8 bits: 377.7 E(85289): 2.3e-104
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)
10 20 30 40 50 60
pF1KB8 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
310 320 330 340 350 360
pF1KB8 AQ
::
XP_016 AQ
>>XP_016882096 (OMIM: 600551) PREDICTED: G-protein coupl (362 aa)
initn: 2479 init1: 2479 opt: 2479 Z-score: 1994.8 bits: 377.7 E(85289): 2.3e-104
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)
10 20 30 40 50 60
pF1KB8 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
310 320 330 340 350 360
pF1KB8 AQ
::
XP_016 AQ
>>NP_003476 (OMIM: 601404) ovarian cancer G-protein coup (365 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.5 bits: 176.5 E(85289): 8.3e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:1-331)
10 20 30 40 50
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYL
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.. ::::::::
NP_003 MGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQIKARNELGVYL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 MNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRY
::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..::::::::::
NP_003 CNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 LAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEG
::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .: :::..:...
NP_003 LAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHRVCFEHYPIQA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 WVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVC
: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.:: ..: :.:
NP_003 WQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLVLSTVVIFLAC
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 FAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGAR
: ::::::: ::. :. : : . ::.::: :: .::.::::::.:::.:.: ..
NP_003 FLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPVLYCFVSETTH
250 260 270 280 290
300 310 320 330 340 350
pF1KB8 SDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQ
:.:. : ::. .. . : . : .: .: ..
NP_003 RDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTKLHPAFQTPNS
300 310 320 330 340 350
360
pF1KB8 LKMLPPAQ
NP_003 PGSGGFPTGRLA
360
>>NP_001171147 (OMIM: 601404) ovarian cancer G-protein c (365 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.5 bits: 176.5 E(85289): 8.3e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:1-331)
10 20 30 40 50
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYL
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.. ::::::::
NP_001 MGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQIKARNELGVYL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 MNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRY
::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..::::::::::
NP_001 CNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 LAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEG
::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .: :::..:...
NP_001 LAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHRVCFEHYPIQA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 WVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVC
: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.:: ..: :.:
NP_001 WQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLVLSTVVIFLAC
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 FAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGAR
: ::::::: ::. :. : : . ::.::: :: .::.::::::.:::.:.: ..
NP_001 FLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPVLYCFVSETTH
250 260 270 280 290
300 310 320 330 340 350
pF1KB8 SDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQ
:.:. : ::. .. . : . : .: .: ..
NP_001 RDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTKLHPAFQTPNS
300 310 320 330 340 350
360
pF1KB8 LKMLPPAQ
NP_001 PGSGGFPTGRLA
360
>>XP_005268167 (OMIM: 601404) PREDICTED: ovarian cancer (375 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.4 bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)
10 20 30 40
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.
XP_005 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
. :::::::: ::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..
XP_005 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
::::::::::::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .:
XP_005 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
:::..:...: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.
XP_005 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
:: ..: :.:: ::::::: ::. :. : : . ::.::: :: .::.::::::.
XP_005 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
250 260 270 280 290
290 300 310 320 330 340
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
:::.:.: .. :.:. : ::. .. . : . : .: .: ..
XP_005 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
300 310 320 330 340 350
350 360
pF1KB8 TPPSQGDQVQLKMLPPAQ
XP_005 LHPAFQTPNSPGSGGFPTGRLA
360 370
>>XP_011535499 (OMIM: 601404) PREDICTED: ovarian cancer (375 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.4 bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)
10 20 30 40
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.
XP_011 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
. :::::::: ::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..
XP_011 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
::::::::::::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .:
XP_011 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
:::..:...: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.
XP_011 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
:: ..: :.:: ::::::: ::. :. : : . ::.::: :: .::.::::::.
XP_011 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
250 260 270 280 290
290 300 310 320 330 340
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
:::.:.: .. :.:. : ::. .. . : . : .: .: ..
XP_011 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
300 310 320 330 340 350
350 360
pF1KB8 TPPSQGDQVQLKMLPPAQ
XP_011 LHPAFQTPNSPGSGGFPTGRLA
360 370
>>XP_011535498 (OMIM: 601404) PREDICTED: ovarian cancer (375 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.4 bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)
10 20 30 40
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.
XP_011 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
. :::::::: ::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..
XP_011 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
::::::::::::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .:
XP_011 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
:::..:...: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.
XP_011 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
:: ..: :.:: ::::::: ::. :. : : . ::.::: :: .::.::::::.
XP_011 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
250 260 270 280 290
290 300 310 320 330 340
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
:::.:.: .. :.:. : ::. .. . : . : .: .: ..
XP_011 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
300 310 320 330 340 350
350 360
pF1KB8 TPPSQGDQVQLKMLPPAQ
XP_011 LHPAFQTPNSPGSGGFPTGRLA
360 370
>>XP_006720325 (OMIM: 601404) PREDICTED: ovarian cancer (375 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.4 bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)
10 20 30 40
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.
XP_006 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
. :::::::: ::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..
XP_006 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
::::::::::::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .:
XP_006 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
:::..:...: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.
XP_006 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
:: ..: :.:: ::::::: ::. :. : : . ::.::: :: .::.::::::.
XP_006 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
250 260 270 280 290
290 300 310 320 330 340
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
:::.:.: .. :.:. : ::. .. . : . : .: .: ..
XP_006 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
300 310 320 330 340 350
350 360
pF1KB8 TPPSQGDQVQLKMLPPAQ
XP_006 LHPAFQTPNSPGSGGFPTGRLA
360 370
>>XP_011535501 (OMIM: 601404) PREDICTED: ovarian cancer (375 aa)
initn: 1093 init1: 940 opt: 1112 Z-score: 907.4 bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)
10 20 30 40
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
::: : .. : .: . . . : .:. :. ::.:.:::.:. .: :.
XP_011 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
. :::::::: ::..:::.:::.::.:..: :.:::: :: ::.. :...: :::::..
XP_011 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
::::::::::::::::.:: ..: .:.::.:: :.:: :: .. :.:.:...:. .:
XP_011 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
:::..:...: .: :: .:::::: :.: ::.::::::: : .:....: .:.::.
XP_011 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
:: ..: :.:: ::::::: ::. :. : : . ::.::: :: .::.::::::.
XP_011 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
250 260 270 280 290
290 300 310 320 330 340
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
:::.:.: .. :.:. : ::. .. . : . : .: .: ..
XP_011 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
300 310 320 330 340 350
350 360
pF1KB8 TPPSQGDQVQLKMLPPAQ
XP_011 LHPAFQTPNSPGSGGFPTGRLA
360 370
362 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:48:35 2016 done: Fri Nov 4 15:48:36 2016
Total Scan time: 6.940 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]