Result of FASTA (omim) for
pFN21AB8791
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8791, 319 aa
1>>>pF1KB8791 319 - 319 aa - 319 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7789+/-0.00046; mu= 19.3214+/- 0.028
mean_var=120.5350+/-32.432, 0's: 0 Z-trim(109.6): 506 B-trim: 979 in 1/48
Lambda= 0.116820
statistics sampled from 17121 (17758) to 17121 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.545), E-opt: 0.2 (0.208), width: 16
Scan time: 6.890
The best scores are: opt bits E(85289)
XP_011510478 (OMIM: 604107) PREDICTED: G-protein c ( 319) 2175 378.4 1.1e-104
XP_011510477 (OMIM: 604107) PREDICTED: G-protein c ( 319) 2175 378.4 1.1e-104
NP_005674 (OMIM: 604107) G-protein coupled recepto ( 319) 2175 378.4 1.1e-104
XP_005247009 (OMIM: 604107) PREDICTED: G-protein c ( 319) 2175 378.4 1.1e-104
NP_001155970 (OMIM: 278150,609239) lysophosphatidi ( 344) 527 100.7 4.6e-21
NP_001155969 (OMIM: 278150,609239) lysophosphatidi ( 344) 527 100.7 4.6e-21
NP_005758 (OMIM: 278150,609239) lysophosphatidic a ( 344) 527 100.7 4.6e-21
XP_006724702 (OMIM: 300086) PREDICTED: lysophospha ( 370) 527 100.7 4.7e-21
XP_005262183 (OMIM: 300086) PREDICTED: lysophospha ( 370) 527 100.7 4.7e-21
XP_016884926 (OMIM: 300086) PREDICTED: lysophospha ( 370) 527 100.7 4.7e-21
XP_016884927 (OMIM: 300086) PREDICTED: lysophospha ( 370) 527 100.7 4.7e-21
NP_005287 (OMIM: 300086) lysophosphatidic acid rec ( 370) 527 100.7 4.7e-21
NP_001264929 (OMIM: 300086) lysophosphatidic acid ( 370) 527 100.7 4.7e-21
NP_005292 (OMIM: 602646) G-protein coupled recepto ( 309) 510 97.8 3.1e-20
NP_001182311 (OMIM: 602646) G-protein coupled rece ( 340) 510 97.8 3.3e-20
NP_001182310 (OMIM: 602646) G-protein coupled rece ( 340) 510 97.8 3.3e-20
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 390 77.6 4.2e-14
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 390 77.6 4.2e-14
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 381 76.1 1.2e-13
NP_938147 (OMIM: 300529) putative P2Y purinoceptor ( 339) 375 75.1 2.3e-13
NP_055314 (OMIM: 300529) putative P2Y purinoceptor ( 339) 375 75.1 2.3e-13
NP_001311147 (OMIM: 300529) putative P2Y purinocep ( 339) 375 75.1 2.3e-13
NP_001311150 (OMIM: 300529) putative P2Y purinocep ( 356) 375 75.1 2.4e-13
NP_001311154 (OMIM: 300529) putative P2Y purinocep ( 364) 375 75.1 2.4e-13
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 373 74.8 3e-13
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 367 73.8 6.1e-13
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 367 73.8 6.1e-13
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 367 73.8 6.1e-13
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 367 73.8 6.1e-13
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 367 73.8 6.1e-13
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 367 73.8 6.2e-13
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 367 73.8 6.2e-13
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 367 73.8 6.4e-13
NP_115942 (OMIM: 300903) probable G-protein couple ( 333) 366 73.5 6.6e-13
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 366 73.6 7.1e-13
NP_001983 (OMIM: 187930) proteinase-activated rece ( 425) 362 73.0 1.2e-12
NP_001154889 (OMIM: 603071) uracil nucleotide/cyst ( 339) 352 71.2 3.4e-12
NP_001154888 (OMIM: 603071) uracil nucleotide/cyst ( 339) 352 71.2 3.4e-12
NP_005282 (OMIM: 603071) uracil nucleotide/cystein ( 367) 352 71.2 3.6e-12
XP_016859322 (OMIM: 603071) PREDICTED: uracil nucl ( 367) 352 71.2 3.6e-12
NP_001154887 (OMIM: 603071) uracil nucleotide/cyst ( 367) 352 71.2 3.6e-12
NP_002554 (OMIM: 601167) P2Y purinoceptor 1 [Homo ( 373) 346 70.2 7.3e-12
NP_000701 (OMIM: 600337) B1 bradykinin receptor [H ( 353) 344 69.9 8.9e-12
NP_005291 (OMIM: 300241) probable G-protein couple ( 381) 344 69.9 9.3e-12
NP_001091048 (OMIM: 300241) probable G-protein cou ( 381) 344 69.9 9.3e-12
XP_005272654 (OMIM: 300241) PREDICTED: probable G- ( 381) 344 69.9 9.3e-12
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 344 69.9 9.4e-12
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 344 69.9 9.4e-12
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 344 69.9 9.5e-12
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 344 70.0 9.5e-12
>>XP_011510478 (OMIM: 604107) PREDICTED: G-protein coupl (319 aa)
initn: 2175 init1: 2175 opt: 2175 Z-score: 2000.6 bits: 378.4 E(85289): 1.1e-104
Smith-Waterman score: 2175; 99.7% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
XP_011 VFFPLEVFGFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
250 260 270 280 290 300
310
pF1KB8 AHRPSRVQLVLQDTTISRG
:::::::::::::::::::
XP_011 AHRPSRVQLVLQDTTISRG
310
>>XP_011510477 (OMIM: 604107) PREDICTED: G-protein coupl (319 aa)
initn: 2175 init1: 2175 opt: 2175 Z-score: 2000.6 bits: 378.4 E(85289): 1.1e-104
Smith-Waterman score: 2175; 99.7% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
XP_011 VFFPLEVFGFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
250 260 270 280 290 300
310
pF1KB8 AHRPSRVQLVLQDTTISRG
:::::::::::::::::::
XP_011 AHRPSRVQLVLQDTTISRG
310
>>NP_005674 (OMIM: 604107) G-protein coupled receptor 55 (319 aa)
initn: 2175 init1: 2175 opt: 2175 Z-score: 2000.6 bits: 378.4 E(85289): 1.1e-104
Smith-Waterman score: 2175; 99.7% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
NP_005 VFFPLEVFGFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
250 260 270 280 290 300
310
pF1KB8 AHRPSRVQLVLQDTTISRG
:::::::::::::::::::
NP_005 AHRPSRVQLVLQDTTISRG
310
>>XP_005247009 (OMIM: 604107) PREDICTED: G-protein coupl (319 aa)
initn: 2175 init1: 2175 opt: 2175 Z-score: 2000.6 bits: 378.4 E(85289): 1.1e-104
Smith-Waterman score: 2175; 99.7% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
XP_005 VFFPLEVFGFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
250 260 270 280 290 300
310
pF1KB8 AHRPSRVQLVLQDTTISRG
:::::::::::::::::::
XP_005 AHRPSRVQLVLQDTTISRG
310
>>NP_001155970 (OMIM: 278150,609239) lysophosphatidic ac (344 aa)
initn: 466 init1: 180 opt: 527 Z-score: 499.2 bits: 100.7 E(85289): 4.6e-21
Smith-Waterman score: 527; 30.6% identity (61.2% similar) in 304 aa overlap (7-300:6-303)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
:. :... . . :: . .:::::. : .::. : :: : :.
NP_001 MVSVNSSHCFYN--DSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVR----NETT
10 20 30 40 50
70 80 90 100 110
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQS-PFPSL-CTLVECLYFVSMYGSVFTICFISMD
::::::. :::.:..:::.. ... :: .: : . :....::::.. . ::.:
NP_001 TYMINLAMSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 RFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIP---IYSFH--GKVEKYMCFHNMS
::::: ::. . ::. :. .: .:. : :: : . : : :. . ::.:.
NP_001 RFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEACFENFP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 DDTWS---AKVFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAA
. ::. ... . .:. ::..:... : : .. : ... ... . : .
NP_001 EATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKINKTKVLKMIFV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 SLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYF
: .: :.: .....: :::.. .:.: . .. . ...:.. :::.: . :::
NP_001 HLIIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSNCCFDPIVYYF
240 250 260 270 280 290
300 310
pF1KB8 VIKEFRMNIRAHRPSRVQLVLQDTTISRG
. .. .:.
NP_001 TSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA
300 310 320 330 340
>>NP_001155969 (OMIM: 278150,609239) lysophosphatidic ac (344 aa)
initn: 466 init1: 180 opt: 527 Z-score: 499.2 bits: 100.7 E(85289): 4.6e-21
Smith-Waterman score: 527; 30.6% identity (61.2% similar) in 304 aa overlap (7-300:6-303)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
:. :... . . :: . .:::::. : .::. : :: : :.
NP_001 MVSVNSSHCFYN--DSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVR----NETT
10 20 30 40 50
70 80 90 100 110
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQS-PFPSL-CTLVECLYFVSMYGSVFTICFISMD
::::::. :::.:..:::.. ... :: .: : . :....::::.. . ::.:
NP_001 TYMINLAMSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 RFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIP---IYSFH--GKVEKYMCFHNMS
::::: ::. . ::. :. .: .:. : :: : . : : :. . ::.:.
NP_001 RFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEACFENFP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 DDTWS---AKVFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAA
. ::. ... . .:. ::..:... : : .. : ... ... . : .
NP_001 EATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKINKTKVLKMIFV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 SLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYF
: .: :.: .....: :::.. .:.: . .. . ...:.. :::.: . :::
NP_001 HLIIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSNCCFDPIVYYF
240 250 260 270 280 290
300 310
pF1KB8 VIKEFRMNIRAHRPSRVQLVLQDTTISRG
. .. .:.
NP_001 TSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA
300 310 320 330 340
>>NP_005758 (OMIM: 278150,609239) lysophosphatidic acid (344 aa)
initn: 466 init1: 180 opt: 527 Z-score: 499.2 bits: 100.7 E(85289): 4.6e-21
Smith-Waterman score: 527; 30.6% identity (61.2% similar) in 304 aa overlap (7-300:6-303)
10 20 30 40 50 60
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
:. :... . . :: . .:::::. : .::. : :: : :.
NP_005 MVSVNSSHCFYN--DSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVR----NETT
10 20 30 40 50
70 80 90 100 110
pF1KB8 IYMINLAVFDLLLVLSLPFKMVLSQVQS-PFPSL-CTLVECLYFVSMYGSVFTICFISMD
::::::. :::.:..:::.. ... :: .: : . :....::::.. . ::.:
NP_005 TYMINLAMSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 RFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIP---IYSFH--GKVEKYMCFHNMS
::::: ::. . ::. :. .: .:. : :: : . : : :. . ::.:.
NP_005 RFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNASEACFENFP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 DDTWS---AKVFFPLEVFGFLLPMVIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAA
. ::. ... . .:. ::..:... : : .. : ... ... . : .
NP_005 EATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKINKTKVLKMIFV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 SLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYF
: .: :.: .....: :::.. .:.: . .. . ...:.. :::.: . :::
NP_005 HLIIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVSNCCFDPIVYYF
240 250 260 270 280 290
300 310
pF1KB8 VIKEFRMNIRAHRPSRVQLVLQDTTISRG
. .. .:.
NP_005 TSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA
300 310 320 330 340
>>XP_006724702 (OMIM: 300086) PREDICTED: lysophosphatidi (370 aa)
initn: 440 init1: 233 opt: 527 Z-score: 498.9 bits: 100.7 E(85289): 4.7e-21
Smith-Waterman score: 527; 29.7% identity (63.5% similar) in 323 aa overlap (1-315:22-338)
10 20 30
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNL
... .... :. : . . .:. ::. .:.:::. :
XP_006 MGDRRFIDFQFQDSNSSLRPRLGNATANNTCIVD--DSFKYNLNGAVYSVVFILGLITNS
10 20 30 40 50
40 50 60 70 80 90
pF1KB8 LAIHGFSTFLKNRWPDYAATSIYMINLAVFDLLLVLSLPFKMVLS-QVQSPF-PSLCTLV
... : .: : . :.:.. :::: :::.: .::::. . . . :: .:: .
XP_006 VSLFVFCFRMKMR----SETAIFITNLAVSDLLFVCTLPFKIFYNFNRHWPFGDTLCKIS
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB8 ECLYFVSMYGSVFTICFISMDRFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIY
.....:::.. . ::.:::::: ::. .:. :. .: .:.:: .:.:
XP_006 GTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISAS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB8 SFHG-KVEKYM--CFHNMSDDTWS---AKVFFPLEVFGFLLPMVIMGFCCSRSIHILLGR
: .:.. ::...: .:. .:. . .:: ::..:... : : .. :
XP_006 LFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCSSVVLRTLRKP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RDHTQDWVQQKACIYSIAASLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQ
.: ...: . :.. .::::: :.: . .:: :::.. :..: .. ...
XP_006 ATLSQIGTNKKKVLKMITVHMAVFVVCFVPYNSVLFLYALVRSQAITNCFLERFAKIMYP
240 250 260 270 280 290
280 290 300 310
pF1KB8 LSMCFSNVNCCLDVFCYYFVIKEFRMNIRAHRPSRVQLVLQDTTISRG
...:....:::.: : :::... :. .. . :.. ... :
XP_006 ITLCLATLNCCFDPFIYYFTLESFQKSFYINAHIRMESLFKTETPLTTKPSLPAIQEEVS
300 310 320 330 340 350
XP_006 DQTTNNGGELMLESTF
360 370
>>XP_005262183 (OMIM: 300086) PREDICTED: lysophosphatidi (370 aa)
initn: 440 init1: 233 opt: 527 Z-score: 498.9 bits: 100.7 E(85289): 4.7e-21
Smith-Waterman score: 527; 29.7% identity (63.5% similar) in 323 aa overlap (1-315:22-338)
10 20 30
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNL
... .... :. : . . .:. ::. .:.:::. :
XP_005 MGDRRFIDFQFQDSNSSLRPRLGNATANNTCIVD--DSFKYNLNGAVYSVVFILGLITNS
10 20 30 40 50
40 50 60 70 80 90
pF1KB8 LAIHGFSTFLKNRWPDYAATSIYMINLAVFDLLLVLSLPFKMVLS-QVQSPF-PSLCTLV
... : .: : . :.:.. :::: :::.: .::::. . . . :: .:: .
XP_005 VSLFVFCFRMKMR----SETAIFITNLAVSDLLFVCTLPFKIFYNFNRHWPFGDTLCKIS
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB8 ECLYFVSMYGSVFTICFISMDRFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIY
.....:::.. . ::.:::::: ::. .:. :. .: .:.:: .:.:
XP_005 GTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISAS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB8 SFHG-KVEKYM--CFHNMSDDTWS---AKVFFPLEVFGFLLPMVIMGFCCSRSIHILLGR
: .:.. ::...: .:. .:. . .:: ::..:... : : .. :
XP_005 LFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCSSVVLRTLRKP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RDHTQDWVQQKACIYSIAASLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQ
.: ...: . :.. .::::: :.: . .:: :::.. :..: .. ...
XP_005 ATLSQIGTNKKKVLKMITVHMAVFVVCFVPYNSVLFLYALVRSQAITNCFLERFAKIMYP
240 250 260 270 280 290
280 290 300 310
pF1KB8 LSMCFSNVNCCLDVFCYYFVIKEFRMNIRAHRPSRVQLVLQDTTISRG
...:....:::.: : :::... :. .. . :.. ... :
XP_005 ITLCLATLNCCFDPFIYYFTLESFQKSFYINAHIRMESLFKTETPLTTKPSLPAIQEEVS
300 310 320 330 340 350
XP_005 DQTTNNGGELMLESTF
360 370
>>XP_016884926 (OMIM: 300086) PREDICTED: lysophosphatidi (370 aa)
initn: 440 init1: 233 opt: 527 Z-score: 498.9 bits: 100.7 E(85289): 4.7e-21
Smith-Waterman score: 527; 29.7% identity (63.5% similar) in 323 aa overlap (1-315:22-338)
10 20 30
pF1KB8 MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNL
... .... :. : . . .:. ::. .:.:::. :
XP_016 MGDRRFIDFQFQDSNSSLRPRLGNATANNTCIVD--DSFKYNLNGAVYSVVFILGLITNS
10 20 30 40 50
40 50 60 70 80 90
pF1KB8 LAIHGFSTFLKNRWPDYAATSIYMINLAVFDLLLVLSLPFKMVLS-QVQSPF-PSLCTLV
... : .: : . :.:.. :::: :::.: .::::. . . . :: .:: .
XP_016 VSLFVFCFRMKMR----SETAIFITNLAVSDLLFVCTLPFKIFYNFNRHWPFGDTLCKIS
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB8 ECLYFVSMYGSVFTICFISMDRFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIY
.....:::.. . ::.:::::: ::. .:. :. .: .:.:: .:.:
XP_016 GTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISAS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB8 SFHG-KVEKYM--CFHNMSDDTWS---AKVFFPLEVFGFLLPMVIMGFCCSRSIHILLGR
: .:.. ::...: .:. .:. . .:: ::..:... : : .. :
XP_016 LFSTTNVNNATTTCFEGFSKRVWKTYLSKITIFIEVVGFIIPLILNVSCSSVVLRTLRKP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RDHTQDWVQQKACIYSIAASLAVFVVSFLPVHLGFFLQFLVRNSFIVECRAKQSISFFLQ
.: ...: . :.. .::::: :.: . .:: :::.. :..: .. ...
XP_016 ATLSQIGTNKKKVLKMITVHMAVFVVCFVPYNSVLFLYALVRSQAITNCFLERFAKIMYP
240 250 260 270 280 290
280 290 300 310
pF1KB8 LSMCFSNVNCCLDVFCYYFVIKEFRMNIRAHRPSRVQLVLQDTTISRG
...:....:::.: : :::... :. .. . :.. ... :
XP_016 ITLCLATLNCCFDPFIYYFTLESFQKSFYINAHIRMESLFKTETPLTTKPSLPAIQEEVS
300 310 320 330 340 350
XP_016 DQTTNNGGELMLESTF
360 370
319 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:37:52 2016 done: Fri Nov 4 15:37:53 2016
Total Scan time: 6.890 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]