Result of FASTA (omim) for
pFN21AB8703
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8703, 574 aa
1>>>pF1KB8703 574 - 574 aa - 574 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9371+/-0.000326; mu= 4.7782+/- 0.020
mean_var=261.7805+/-52.269, 0's: 0 Z-trim(124.3): 30 B-trim: 154 in 1/57
Lambda= 0.079269
statistics sampled from 45740 (45771) to 45740 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.537), width: 16
Scan time: 13.420
The best scores are: opt bits E(85289)
NP_056485 (OMIM: 612844) sentrin-specific protease ( 574) 4035 474.5 4.2e-133
XP_011510846 (OMIM: 612845) PREDICTED: sentrin-spe ( 755) 1040 132.1 6.5e-30
NP_689912 (OMIM: 612845) sentrin-specific protease ( 755) 1040 132.1 6.5e-30
XP_005269367 (OMIM: 612845) PREDICTED: sentrin-spe ( 727) 702 93.4 2.7e-18
XP_016874729 (OMIM: 612157) PREDICTED: sentrin-spe ( 432) 559 76.8 1.6e-13
XP_016874727 (OMIM: 612157) PREDICTED: sentrin-spe ( 445) 559 76.8 1.6e-13
XP_006719425 (OMIM: 612157) PREDICTED: sentrin-spe ( 445) 559 76.8 1.6e-13
XP_016874728 (OMIM: 612157) PREDICTED: sentrin-spe ( 445) 559 76.8 1.6e-13
XP_016874726 (OMIM: 612157) PREDICTED: sentrin-spe ( 631) 559 77.0 2.1e-13
XP_016874725 (OMIM: 612157) PREDICTED: sentrin-spe ( 631) 559 77.0 2.1e-13
XP_016874724 (OMIM: 612157) PREDICTED: sentrin-spe ( 637) 559 77.0 2.1e-13
XP_016874723 (OMIM: 612157) PREDICTED: sentrin-spe ( 637) 559 77.0 2.1e-13
XP_016874722 (OMIM: 612157) PREDICTED: sentrin-spe ( 637) 559 77.0 2.1e-13
NP_001254523 (OMIM: 612157) sentrin-specific prote ( 644) 559 77.0 2.1e-13
NP_001254524 (OMIM: 612157) sentrin-specific prote ( 644) 559 77.0 2.1e-13
XP_011536547 (OMIM: 612157) PREDICTED: sentrin-spe ( 660) 559 77.0 2.1e-13
XP_011536546 (OMIM: 612157) PREDICTED: sentrin-spe ( 663) 559 77.0 2.1e-13
XP_016874720 (OMIM: 612157) PREDICTED: sentrin-spe ( 675) 559 77.0 2.2e-13
XP_016874721 (OMIM: 612157) PREDICTED: sentrin-spe ( 675) 559 77.0 2.2e-13
XP_006719424 (OMIM: 612157) PREDICTED: sentrin-spe ( 676) 559 77.0 2.2e-13
XP_016874719 (OMIM: 612157) PREDICTED: sentrin-spe ( 694) 559 77.0 2.2e-13
XP_016874718 (OMIM: 612157) PREDICTED: sentrin-spe ( 707) 559 77.0 2.2e-13
XP_011510847 (OMIM: 612845) PREDICTED: sentrin-spe ( 643) 529 73.6 2.3e-12
XP_005269369 (OMIM: 612845) PREDICTED: sentrin-spe ( 681) 524 73.0 3.5e-12
XP_016861359 (OMIM: 612845) PREDICTED: sentrin-spe ( 709) 524 73.0 3.6e-12
NP_001294974 (OMIM: 612845) sentrin-specific prote ( 709) 524 73.0 3.6e-12
XP_005247748 (OMIM: 608261) PREDICTED: sentrin-spe ( 474) 494 69.4 2.9e-11
NP_067640 (OMIM: 608261) sentrin-specific protease ( 589) 494 69.5 3.4e-11
XP_016862462 (OMIM: 608261) PREDICTED: sentrin-spe ( 430) 425 61.5 6.4e-09
XP_005247747 (OMIM: 608261) PREDICTED: sentrin-spe ( 545) 425 61.6 7.6e-09
>>NP_056485 (OMIM: 612844) sentrin-specific protease 3 [ (574 aa)
initn: 4035 init1: 4035 opt: 4035 Z-score: 2510.7 bits: 474.5 E(85289): 4.2e-133
Smith-Waterman score: 4035; 99.8% identity (99.8% similar) in 574 aa overlap (1-574:1-574)
10 20 30 40 50 60
pF1KB8 MKETIQGTGSWGPEPPGPGIPPAYSSPRRERLRWPPPPKPRLKSGGGFGPDPGSGTTVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MKETIQGTGSWGPEPPGPGIPPAYSSPRRERLRWPPPPKPRLKSGGGFGPDPGSGTTVPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RRLPVPRPSFDASASEEEEEEEEEVDEDEEEEVAAWRLPPRWSQLGTSQRPRPSRPTHRK
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
NP_056 RRLPVPRPSFDASASEEEEEEEEEEDEDEEEEVAAWRLPPRWSQLGTSQRPRPSRPTHRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TCSQRRRRAMRAFRMLLYSKSTSLTFHWKLWGRHRGRRRGLAHPKNHLSPQQGGATPQVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TCSQRRRRAMRAFRMLLYSKSTSLTFHWKLWGRHRGRRRGLAHPKNHLSPQQGGATPQVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SPCCRFDSPRGPPPPRLGLLGALMAEDGVRGSPPVPSGPPMEEDGLRWTPKSPLDPDSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SPCCRFDSPRGPPPPRLGLLGALMAEDGVRGSPPVPSGPPMEEDGLRWTPKSPLDPDSGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LSCTLPNGFGGQSGPEGERSLAPPDASILISNVCSIGDHVAQELFQGSDLGMAEEAERPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LSCTLPNGFGGQSGPEGERSLAPPDASILISNVCSIGDHVAQELFQGSDLGMAEEAERPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EKAGQHSPLREEHVTCVQSILDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EKAGQHSPLREEHVTCVQSILDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 LQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 KVHFFNSFFYDKLRTKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KVHFFNSFFYDKLRTKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 FDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYC
490 500 510 520 530 540
550 560 570
pF1KB8 KHLALSQPFSFTQQDMPKLRRQIYKELCHCKLTV
::::::::::::::::::::::::::::::::::
NP_056 KHLALSQPFSFTQQDMPKLRRQIYKELCHCKLTV
550 560 570
>>XP_011510846 (OMIM: 612845) PREDICTED: sentrin-specifi (755 aa)
initn: 1041 init1: 887 opt: 1040 Z-score: 658.1 bits: 132.1 E(85289): 6.5e-30
Smith-Waterman score: 1040; 53.5% identity (79.2% similar) in 284 aa overlap (291-572:475-753)
270 280 290 300 310
pF1KB8 LAPPDASILISNVCSIGDHVAQELFQGSDLGMAEEAERPGEKAGQH-SPLREEHVT-CVQ
:. : . : : .:. ::. .:... :..
XP_011 DGSLKQSILSSELLDHPYCKSPLEAPLVCSGLKLENQVGGGKNSQKASPVDDEQLSVCLS
450 460 470 480 490 500
320 330 340 350 360 370
pF1KB8 SILDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRG
..::: .. ::::.::: ::. .:.:.:...:: .:: .. . : .:. . .
XP_011 GFLDEVMKKYGSLVPLSEKEVLGRLKDVFNEDFS--NRKPFINREITNYRARHQKC---N
510 520 530 540 550
380 390 400 410 420 430
pF1KB8 FRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTKGY
::. :..:.: ::::.:: :::::::::.::::.:.::.::.:::::::::. .: ::::
XP_011 FRIFYNKHMLDMDDLATLDGQNWLNDQVINMYGELIMDAVPDKVHFFNSFFHRQLVTKGY
560 570 580 590 600 610
440 450 460 470 480 490
pF1KB8 DGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKY
.:::::::.::.:.: :::::::::::::::.: . : :...::: . : ..: ::
XP_011 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQGIHFKFCVENIRKY
620 630 640 650 660 670
500 510 520 530 540 550
pF1KB8 LQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPK
: .:: .:.: .: :::. . .:.::::::.::::::: ::: :::.:.:.:::.
XP_011 LLTEAREKNRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPR
680 690 700 710 720 730
560 570
pF1KB8 LRRQIYKELCHCKLTV
.:..::::::.:.:
XP_011 VRKRIYKELCECRLMD
740 750
>>NP_689912 (OMIM: 612845) sentrin-specific protease 5 i (755 aa)
initn: 1041 init1: 887 opt: 1040 Z-score: 658.1 bits: 132.1 E(85289): 6.5e-30
Smith-Waterman score: 1040; 53.5% identity (79.2% similar) in 284 aa overlap (291-572:475-753)
270 280 290 300 310
pF1KB8 LAPPDASILISNVCSIGDHVAQELFQGSDLGMAEEAERPGEKAGQH-SPLREEHVT-CVQ
:. : . : : .:. ::. .:... :..
NP_689 DGSLKQSILSSELLDHPYCKSPLEAPLVCSGLKLENQVGGGKNSQKASPVDDEQLSVCLS
450 460 470 480 490 500
320 330 340 350 360 370
pF1KB8 SILDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRG
..::: .. ::::.::: ::. .:.:.:...:: .:: .. . : .:. . .
NP_689 GFLDEVMKKYGSLVPLSEKEVLGRLKDVFNEDFS--NRKPFINREITNYRARHQKC---N
510 520 530 540 550
380 390 400 410 420 430
pF1KB8 FRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTKGY
::. :..:.: ::::.:: :::::::::.::::.:.::.::.:::::::::. .: ::::
NP_689 FRIFYNKHMLDMDDLATLDGQNWLNDQVINMYGELIMDAVPDKVHFFNSFFHRQLVTKGY
560 570 580 590 600 610
440 450 460 470 480 490
pF1KB8 DGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKY
.:::::::.::.:.: :::::::::::::::.: . : :...::: . : ..: ::
NP_689 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQGIHFKFCVENIRKY
620 630 640 650 660 670
500 510 520 530 540 550
pF1KB8 LQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPK
: .:: .:.: .: :::. . .:.::::::.::::::: ::: :::.:.:.:::.
NP_689 LLTEAREKNRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPR
680 690 700 710 720 730
560 570
pF1KB8 LRRQIYKELCHCKLTV
.:..::::::.:.:
NP_689 VRKRIYKELCECRLMD
740 750
>>XP_005269367 (OMIM: 612845) PREDICTED: sentrin-specifi (727 aa)
initn: 946 init1: 546 opt: 702 Z-score: 449.4 bits: 93.4 E(85289): 2.7e-18
Smith-Waterman score: 903; 49.6% identity (72.9% similar) in 284 aa overlap (291-572:475-725)
270 280 290 300 310
pF1KB8 LAPPDASILISNVCSIGDHVAQELFQGSDLGMAEEAERPGEKAGQH-SPLREEHVT-CVQ
:. : . : : .:. ::. .:... :..
XP_005 DGSLKQSILSSELLDHPYCKSPLEAPLVCSGLKLENQVGGGKNSQKASPVDDEQLSVCLS
450 460 470 480 490 500
320 330 340 350 360 370
pF1KB8 SILDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRG
..::: .. ::::.::: ::. .:.:.:...:: .:: .. . : .:. . .
XP_005 GFLDEVMKKYGSLVPLSEKEVLGRLKDVFNEDFS--NRKPFINREITNYRARHQKC---N
510 520 530 540 550
380 390 400 410 420 430
pF1KB8 FRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTKGY
::. :..:.: ::::.:: :::::::::.::::.:.::.::.:::::::::. .: ::::
XP_005 FRIFYNKHMLDMDDLATLDGQNWLNDQVINMYGELIMDAVPDKVHFFNSFFHRQLVTKGY
560 570 580 590 600 610
440 450 460 470 480 490
pF1KB8 DGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKY
.:::::::.::.:.: :::::::::::::::.: . : :...::: . : . : .
XP_005 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQGIHFKFCVECIPQ-
620 630 640 650 660 670
500 510 520 530 540 550
pF1KB8 LQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPK
:.::::::.::::::: ::: :::.:.:.:::.
XP_005 ---------------------------QKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPR
680 690 700 710
560 570
pF1KB8 LRRQIYKELCHCKLTV
.:..::::::.:.:
XP_005 VRKRIYKELCECRLMD
720
>>XP_016874729 (OMIM: 612157) PREDICTED: sentrin-specifi (432 aa)
initn: 461 init1: 331 opt: 559 Z-score: 363.9 bits: 76.8 E(85289): 1.6e-13
Smith-Waterman score: 562; 37.0% identity (63.7% similar) in 273 aa overlap (308-572:181-431)
280 290 300 310 320 330
pF1KB8 DHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREE-HVTCVQSILDEFLQTYGSLIPLST
::..: :: :: : : . :
XP_016 QKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQET-----QKKGHKLTDSE
160 170 180 190 200
340 350 360 370 380 390
pF1KB8 DEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTL
:: : :.. ..:... :.: ... ..::.. :. :. ::
XP_016 DEFPEITEEM-EKEIKNVFRNG-----------NQDEVLSEAFRLTITRK-----DIQTL
210 220 230 240
400 410 420 430 440 450
pF1KB8 YGQNWLNDQVMNMYGDLVMDTVPEK----VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFN
:::::...:.: ...:. :: :: ::.::. ::.: ::..::::::.::.:.
XP_016 NHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFS
250 260 270 280 290 300
460 470 480 490 500 510
pF1KB8 KELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFH
..::.:::: ::: : :: :...:::.::. .: . . . .::. :.. : : .:
XP_016 VDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFD
310 320 330 340 350 360
520 530 540 550 560
pF1KB8 -QGWKGYFK--MNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCH
.::. . : ... .: : :::: :. .: .. ..:..:::: :: .:... :. :
XP_016 TNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILH
370 380 390 400 410 420
570
pF1KB8 CKLTV
::
XP_016 RKLL
430
>>XP_016874727 (OMIM: 612157) PREDICTED: sentrin-specifi (445 aa)
initn: 461 init1: 331 opt: 559 Z-score: 363.7 bits: 76.8 E(85289): 1.6e-13
Smith-Waterman score: 562; 37.0% identity (63.7% similar) in 273 aa overlap (308-572:194-444)
280 290 300 310 320 330
pF1KB8 DHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREE-HVTCVQSILDEFLQTYGSLIPLST
::..: :: :: : : . :
XP_016 QKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQET-----QKKGHKLTDSE
170 180 190 200 210
340 350 360 370 380 390
pF1KB8 DEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTL
:: : :.. ..:... :.: ... ..::.. :. :. ::
XP_016 DEFPEITEEM-EKEIKNVFRNG-----------NQDEVLSEAFRLTITRK-----DIQTL
220 230 240 250 260
400 410 420 430 440 450
pF1KB8 YGQNWLNDQVMNMYGDLVMDTVPEK----VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFN
:::::...:.: ...:. :: :: ::.::. ::.: ::..::::::.::.:.
XP_016 NHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFS
270 280 290 300 310 320
460 470 480 490 500 510
pF1KB8 KELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFH
..::.:::: ::: : :: :...:::.::. .: . . . .::. :.. : : .:
XP_016 VDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFD
330 340 350 360 370 380
520 530 540 550 560
pF1KB8 -QGWKGYFK--MNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCH
.::. . : ... .: : :::: :. .: .. ..:..:::: :: .:... :. :
XP_016 TNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILH
390 400 410 420 430 440
570
pF1KB8 CKLTV
::
XP_016 RKLL
>>XP_006719425 (OMIM: 612157) PREDICTED: sentrin-specifi (445 aa)
initn: 461 init1: 331 opt: 559 Z-score: 363.7 bits: 76.8 E(85289): 1.6e-13
Smith-Waterman score: 562; 37.0% identity (63.7% similar) in 273 aa overlap (308-572:194-444)
280 290 300 310 320 330
pF1KB8 DHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREE-HVTCVQSILDEFLQTYGSLIPLST
::..: :: :: : : . :
XP_006 QKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQET-----QKKGHKLTDSE
170 180 190 200 210
340 350 360 370 380 390
pF1KB8 DEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTL
:: : :.. ..:... :.: ... ..::.. :. :. ::
XP_006 DEFPEITEEM-EKEIKNVFRNG-----------NQDEVLSEAFRLTITRK-----DIQTL
220 230 240 250 260
400 410 420 430 440 450
pF1KB8 YGQNWLNDQVMNMYGDLVMDTVPEK----VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFN
:::::...:.: ...:. :: :: ::.::. ::.: ::..::::::.::.:.
XP_006 NHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFS
270 280 290 300 310 320
460 470 480 490 500 510
pF1KB8 KELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFH
..::.:::: ::: : :: :...:::.::. .: . . . .::. :.. : : .:
XP_006 VDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFD
330 340 350 360 370 380
520 530 540 550 560
pF1KB8 -QGWKGYFK--MNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCH
.::. . : ... .: : :::: :. .: .. ..:..:::: :: .:... :. :
XP_006 TNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILH
390 400 410 420 430 440
570
pF1KB8 CKLTV
::
XP_006 RKLL
>>XP_016874728 (OMIM: 612157) PREDICTED: sentrin-specifi (445 aa)
initn: 461 init1: 331 opt: 559 Z-score: 363.7 bits: 76.8 E(85289): 1.6e-13
Smith-Waterman score: 562; 37.0% identity (63.7% similar) in 273 aa overlap (308-572:194-444)
280 290 300 310 320 330
pF1KB8 DHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREE-HVTCVQSILDEFLQTYGSLIPLST
::..: :: :: : : . :
XP_016 QKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQET-----QKKGHKLTDSE
170 180 190 200 210
340 350 360 370 380 390
pF1KB8 DEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTL
:: : :.. ..:... :.: ... ..::.. :. :. ::
XP_016 DEFPEITEEM-EKEIKNVFRNG-----------NQDEVLSEAFRLTITRK-----DIQTL
220 230 240 250 260
400 410 420 430 440 450
pF1KB8 YGQNWLNDQVMNMYGDLVMDTVPEK----VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFN
:::::...:.: ...:. :: :: ::.::. ::.: ::..::::::.::.:.
XP_016 NHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFS
270 280 290 300 310 320
460 470 480 490 500 510
pF1KB8 KELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFH
..::.:::: ::: : :: :...:::.::. .: . . . .::. :.. : : .:
XP_016 VDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFD
330 340 350 360 370 380
520 530 540 550 560
pF1KB8 -QGWKGYFK--MNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCH
.::. . : ... .: : :::: :. .: .. ..:..:::: :: .:... :. :
XP_016 TNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILH
390 400 410 420 430 440
570
pF1KB8 CKLTV
::
XP_016 RKLL
>>XP_016874726 (OMIM: 612157) PREDICTED: sentrin-specifi (631 aa)
initn: 492 init1: 331 opt: 559 Z-score: 361.8 bits: 77.0 E(85289): 2.1e-13
Smith-Waterman score: 562; 37.0% identity (63.7% similar) in 273 aa overlap (308-572:380-630)
280 290 300 310 320 330
pF1KB8 DHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREE-HVTCVQSILDEFLQTYGSLIPLST
::..: :: :: : : . :
XP_016 QKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQET-----QKKGHKLTDSE
350 360 370 380 390 400
340 350 360 370 380 390
pF1KB8 DEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTL
:: : :.. ..:... :.: ... ..::.. :. :. ::
XP_016 DEFPEITEEM-EKEIKNVFRNG-----------NQDEVLSEAFRLTITRK-----DIQTL
410 420 430 440
400 410 420 430 440 450
pF1KB8 YGQNWLNDQVMNMYGDLVMDTVPEK----VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFN
:::::...:.: ...:. :: :: ::.::. ::.: ::..::::::.::.:.
XP_016 NHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFS
450 460 470 480 490 500
460 470 480 490 500 510
pF1KB8 KELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFH
..::.:::: ::: : :: :...:::.::. .: . . . .::. :.. : : .:
XP_016 VDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFD
510 520 530 540 550 560
520 530 540 550 560
pF1KB8 -QGWKGYFK--MNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCH
.::. . : ... .: : :::: :. .: .. ..:..:::: :: .:... :. :
XP_016 TNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILH
570 580 590 600 610 620
570
pF1KB8 CKLTV
::
XP_016 RKLL
630
>>XP_016874725 (OMIM: 612157) PREDICTED: sentrin-specifi (631 aa)
initn: 492 init1: 331 opt: 559 Z-score: 361.8 bits: 77.0 E(85289): 2.1e-13
Smith-Waterman score: 562; 37.0% identity (63.7% similar) in 273 aa overlap (308-572:380-630)
280 290 300 310 320 330
pF1KB8 DHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREE-HVTCVQSILDEFLQTYGSLIPLST
::..: :: :: : : . :
XP_016 QKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQET-----QKKGHKLTDSE
350 360 370 380 390 400
340 350 360 370 380 390
pF1KB8 DEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTL
:: : :.. ..:... :.: ... ..::.. :. :. ::
XP_016 DEFPEITEEM-EKEIKNVFRNG-----------NQDEVLSEAFRLTITRK-----DIQTL
410 420 430 440
400 410 420 430 440 450
pF1KB8 YGQNWLNDQVMNMYGDLVMDTVPEK----VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFN
:::::...:.: ...:. :: :: ::.::. ::.: ::..::::::.::.:.
XP_016 NHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFS
450 460 470 480 490 500
460 470 480 490 500 510
pF1KB8 KELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFH
..::.:::: ::: : :: :...:::.::. .: . . . .::. :.. : : .:
XP_016 VDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFD
510 520 530 540 550 560
520 530 540 550 560
pF1KB8 -QGWKGYFK--MNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCH
.::. . : ... .: : :::: :. .: .. ..:..:::: :: .:... :. :
XP_016 TNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILH
570 580 590 600 610 620
570
pF1KB8 CKLTV
::
XP_016 RKLL
630
574 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:45:02 2016 done: Fri Nov 4 14:45:04 2016
Total Scan time: 13.420 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]