FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8621, 870 aa 1>>>pF1KB8621 870 - 870 aa - 870 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6487+/-0.00121; mu= 18.8624+/- 0.072 mean_var=76.6324+/-15.300, 0's: 0 Z-trim(102.7): 41 B-trim: 61 in 1/49 Lambda= 0.146510 statistics sampled from 7036 (7073) to 7036 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.217), width: 16 Scan time: 3.950 The best scores are: opt bits E(32554) CCDS2259.1 GPR155 gene_id:151556|Hs108|chr2 ( 870) 5741 1224.0 0 CCDS74605.1 GPR155 gene_id:151556|Hs108|chr2 ( 842) 3055 656.2 6.8e-188 >>CCDS2259.1 GPR155 gene_id:151556|Hs108|chr2 (870 aa) initn: 5741 init1: 5741 opt: 5741 Z-score: 6554.8 bits: 1224.0 E(32554): 0 Smith-Waterman score: 5741; 100.0% identity (100.0% similar) in 870 aa overlap (1-870:1-870) 10 20 30 40 50 60 pF1KB8 MNSNLPAENLTIAVNMTKTLPTAVTHGFNSTNDPPSMSITRLFPALLECFGIVLCGYIAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MNSNLPAENLTIAVNMTKTLPTAVTHGFNSTNDPPSMSITRLFPALLECFGIVLCGYIAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 RANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 RANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 TLLVASPDSRFSKAGLFPIFATQSNDFALGYPIVEALYQTTYPEYLQYIYLVAPISLMML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 TLLVASPDSRFSKAGLFPIFATQSNDFALGYPIVEALYQTTYPEYLQYIYLVAPISLMML 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 NPIGFIFCEIQKWKDTQNASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFILDRKVPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 NPIGFIFCEIQKWKDTQNASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFILDRKVPVY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 VENFLDGLGNSFSGSALFYLGLTMVGKIKRLKKSAFVVLILLITAKLLVLPLLCREMVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 VENFLDGLGNSFSGSALFYLGLTMVGKIKRLKKSAFVVLILLITAKLLVLPLLCREMVEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 LDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSAPIMYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 LDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSAPIMYV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 SAWLLTFPTMDPKPLAYAIQNVSFDISIVSLISLIWSLAILLLSKKYKQLPHMLTTNLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 SAWLLTFPTMDPKPLAYAIQNVSFDISIVSLISLIWSLAILLLSKKYKQLPHMLTTNLLI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB8 AQSIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYSTYLWTGLLAISLFLLKKRERVQIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 AQSIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYSTYLWTGLLAISLFLLKKRERVQIP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB8 VGIIIISGWGIPALLVGVLLITGKHNGDSIDSAFFYGKEQMITTAVTLFCSILIAGISLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 VGIIIISGWGIPALLVGVLLITGKHNGDSIDSAFFYGKEQMITTAVTLFCSILIAGISLM 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB8 CMNQTAQAGSYEGFDQSQSHKVVEPGNTAFEESPAPVNEPELFTSSIPETSCCSCSMGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 CMNQTAQAGSYEGFDQSQSHKVVEPGNTAFEESPAPVNEPELFTSSIPETSCCSCSMGNG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB8 ELHCPSIEPIANTSTSEPVIPSFEKNNHCVSRCNSQSCILAQEEEQYLQSGDQQLTRHVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 ELHCPSIEPIANTSTSEPVIPSFEKNNHCVSRCNSQSCILAQEEEQYLQSGDQQLTRHVL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB8 LCLLLIIGLFANLSSCLWWLFNQEPGRLYVELQFFCAVFNFGQGFISFGIFGLDKHLIIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 LCLLLIIGLFANLSSCLWWLFNQEPGRLYVELQFFCAVFNFGQGFISFGIFGLDKHLIIL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB8 PFKRRLEFLWNNKDTAENRDSPVSEEIKMTCQQFIHYHRDLCIRNIVKERRCGAKTSAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 PFKRRLEFLWNNKDTAENRDSPVSEEIKMTCQQFIHYHRDLCIRNIVKERRCGAKTSAGT 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB8 FCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 FCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPEQ 790 800 810 820 830 840 850 860 870 pF1KB8 SPPAINANTLQQERYKEIEHSSPPSHSPKT :::::::::::::::::::::::::::::: CCDS22 SPPAINANTLQQERYKEIEHSSPPSHSPKT 850 860 870 >>CCDS74605.1 GPR155 gene_id:151556|Hs108|chr2 (842 aa) initn: 3055 init1: 3055 opt: 3055 Z-score: 3486.7 bits: 656.2 E(32554): 6.8e-188 Smith-Waterman score: 5501; 96.8% identity (96.8% similar) in 870 aa overlap (1-870:1-842) 10 20 30 40 50 60 pF1KB8 MNSNLPAENLTIAVNMTKTLPTAVTHGFNSTNDPPSMSITRLFPALLECFGIVLCGYIAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MNSNLPAENLTIAVNMTKTLPTAVTHGFNSTNDPPSMSITRLFPALLECFGIVLCGYIAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 RANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 RANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 TLLVASPDSRFSKAGLFPIFATQSNDFALGYPIVEALYQTTYPEYLQYIYLVAPISLMML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 TLLVASPDSRFSKAGLFPIFATQSNDFALGYPIVEALYQTTYPEYLQYIYLVAPISLMML 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 NPIGFIFCEIQKWKDTQNASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFILDRKVPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 NPIGFIFCEIQKWKDTQNASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFILDRKVPVY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 VENFLDGLGNSFSGSALFYLGLTMVGKIKRLKKSAFVVLILLITAKLLVLPLLCREMVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VENFLDGLGNSFSGSALFYLGLTMVGKIKRLKKSAFVVLILLITAKLLVLPLLCREMVEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 LDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSAPIMYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 LDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSAPIMYV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 SAWLLTFPTMDPKPLAYAIQNVSFDISIVSLISLIWSLAILLLSKKYKQLPHMLTTNLLI :::::::::::::::::::::::::::::::::: CCDS74 SAWLLTFPTMDPKPLAYAIQNVSFDISIVSLISL-------------------------- 370 380 390 430 440 450 460 470 480 pF1KB8 AQSIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYSTYLWTGLLAISLFLLKKRERVQIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 --SIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYSTYLWTGLLAISLFLLKKRERVQIP 400 410 420 430 440 450 490 500 510 520 530 540 pF1KB8 VGIIIISGWGIPALLVGVLLITGKHNGDSIDSAFFYGKEQMITTAVTLFCSILIAGISLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VGIIIISGWGIPALLVGVLLITGKHNGDSIDSAFFYGKEQMITTAVTLFCSILIAGISLM 460 470 480 490 500 510 550 560 570 580 590 600 pF1KB8 CMNQTAQAGSYEGFDQSQSHKVVEPGNTAFEESPAPVNEPELFTSSIPETSCCSCSMGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 CMNQTAQAGSYEGFDQSQSHKVVEPGNTAFEESPAPVNEPELFTSSIPETSCCSCSMGNG 520 530 540 550 560 570 610 620 630 640 650 660 pF1KB8 ELHCPSIEPIANTSTSEPVIPSFEKNNHCVSRCNSQSCILAQEEEQYLQSGDQQLTRHVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 ELHCPSIEPIANTSTSEPVIPSFEKNNHCVSRCNSQSCILAQEEEQYLQSGDQQLTRHVL 580 590 600 610 620 630 670 680 690 700 710 720 pF1KB8 LCLLLIIGLFANLSSCLWWLFNQEPGRLYVELQFFCAVFNFGQGFISFGIFGLDKHLIIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 LCLLLIIGLFANLSSCLWWLFNQEPGRLYVELQFFCAVFNFGQGFISFGIFGLDKHLIIL 640 650 660 670 680 690 730 740 750 760 770 780 pF1KB8 PFKRRLEFLWNNKDTAENRDSPVSEEIKMTCQQFIHYHRDLCIRNIVKERRCGAKTSAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 PFKRRLEFLWNNKDTAENRDSPVSEEIKMTCQQFIHYHRDLCIRNIVKERRCGAKTSAGT 700 710 720 730 740 750 790 800 810 820 830 840 pF1KB8 FCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 FCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPEQ 760 770 780 790 800 810 850 860 870 pF1KB8 SPPAINANTLQQERYKEIEHSSPPSHSPKT :::::::::::::::::::::::::::::: CCDS74 SPPAINANTLQQERYKEIEHSSPPSHSPKT 820 830 840 870 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 07:36:43 2016 done: Thu Nov 3 07:36:44 2016 Total Scan time: 3.950 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]