FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8329, 215 aa 1>>>pF1KB8329 215 - 215 aa - 215 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4278+/-0.00043; mu= 18.9204+/- 0.027 mean_var=85.5989+/-17.563, 0's: 0 Z-trim(111.4): 449 B-trim: 457 in 1/55 Lambda= 0.138625 statistics sampled from 19511 (20034) to 19511 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.235), width: 16 Scan time: 4.640 The best scores are: opt bits E(85289) XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 1391 288.1 7.6e-78 XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 1391 288.1 7.6e-78 NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 1391 288.1 7.6e-78 NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 1391 288.1 7.6e-78 NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1190 247.9 9.6e-66 XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 1190 247.9 9.6e-66 NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1190 247.9 9.6e-66 XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 1190 247.9 9.6e-66 NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 1190 248.0 1e-65 NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 1178 245.5 5e-65 NP_001278977 (OMIM: 179512) ras-related protein Ra ( 201) 806 171.0 1.2e-42 NP_001238966 (OMIM: 179514) ras-related protein Ra ( 174) 696 149.0 4.6e-36 NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 615 132.8 3.7e-31 NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 586 127.0 2.1e-29 XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244) 562 122.3 6.6e-28 NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212) 559 121.7 9.2e-28 XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248) 559 121.8 1e-27 NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 537 117.2 1.9e-26 NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 522 114.3 1.5e-25 NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 518 113.4 2.6e-25 NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 514 112.7 4.7e-25 NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 510 111.9 8.1e-25 NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 505 110.9 1.7e-24 NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 498 109.5 4.4e-24 NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 494 108.7 7.8e-24 NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 488 107.5 1.7e-23 NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 486 107.1 2.3e-23 NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 486 107.1 2.3e-23 NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 486 107.1 2.4e-23 NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 483 106.4 3.4e-23 NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 483 106.5 3.5e-23 NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 481 106.1 4.7e-23 NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 479 105.8 6.7e-23 NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 477 105.2 7.6e-23 NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 477 105.3 7.8e-23 XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 475 104.8 1e-22 NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 472 104.2 1.5e-22 NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 472 104.2 1.5e-22 NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 472 104.2 1.5e-22 NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 472 104.2 1.5e-22 NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 471 104.1 1.8e-22 NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 463 102.5 5.5e-22 NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 463 102.5 5.6e-22 XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 461 102.1 7.4e-22 NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 455 100.9 1.7e-21 NP_570137 (OMIM: 612415) ras-related protein Rab-2 ( 203) 453 100.4 2.2e-21 NP_001026847 (OMIM: 612415) ras-related protein Ra ( 203) 453 100.4 2.2e-21 NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 453 100.5 2.3e-21 NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 452 100.2 2.5e-21 NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 443 98.4 8.6e-21 >>XP_005269109 (OMIM: 179514) PREDICTED: ras-related pro (215 aa) initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78 Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215) 10 20 30 40 50 60 pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 130 140 150 160 170 180 190 200 210 pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::::::::::::::::::::::::::::::::: XP_005 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 190 200 210 >>XP_005269108 (OMIM: 179514) PREDICTED: ras-related pro (215 aa) initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78 Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215) 10 20 30 40 50 60 pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 130 140 150 160 170 180 190 200 210 pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::::::::::::::::::::::::::::::::: XP_005 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 190 200 210 >>NP_001238965 (OMIM: 179514) ras-related protein Rab-5B (215 aa) initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78 Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215) 10 20 30 40 50 60 pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 130 140 150 160 170 180 190 200 210 pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::::::::::::::::::::::::::::::::: NP_001 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 190 200 210 >>NP_002859 (OMIM: 179514) ras-related protein Rab-5B is (215 aa) initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78 Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215) 10 20 30 40 50 60 pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 130 140 150 160 170 180 190 200 210 pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::::::::::::::::::::::::::::::::: NP_002 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 190 200 210 >>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is (216 aa) initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66 Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216) 10 20 30 40 50 pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT :..:. .::::: ..::::::::::::::::::::::::::::::::::::::::::: NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ :.::::::::::::::::::::::::::::::::::::::::::: .::::::.:::::: NP_958 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK :::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.:::: NP_958 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 130 140 150 160 170 180 180 190 200 210 pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::.:::: :: ::.:::::.:.. ..:::::: NP_958 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 190 200 210 >>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa) initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66 Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216) 10 20 30 40 50 pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT :..:. .::::: ..::::::::::::::::::::::::::::::::::::::::::: XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ :.::::::::::::::::::::::::::::::::::::::::::: .::::::.:::::: XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK :::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.:::: XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 130 140 150 160 170 180 180 190 200 210 pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::.:::: :: ::.:::::.:.. ..:::::: XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 190 200 210 >>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa) initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66 Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216) 10 20 30 40 50 pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT :..:. .::::: ..::::::::::::::::::::::::::::::::::::::::::: NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ :.::::::::::::::::::::::::::::::::::::::::::: .::::::.:::::: NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK :::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.:::: NP_004 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 130 140 150 160 170 180 180 190 200 210 pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::.:::: :: ::.:::::.:.. ..:::::: NP_004 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 190 200 210 >>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa) initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66 Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216) 10 20 30 40 50 pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT :..:. .::::: ..::::::::::::::::::::::::::::::::::::::::::: XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ :.::::::::::::::::::::::::::::::::::::::::::: .::::::.:::::: XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK :::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.:::: XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 130 140 150 160 170 180 180 190 200 210 pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN ::::.:::: :: ::.:::::.:.. ..:::::: XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 190 200 210 >>NP_001238968 (OMIM: 604037) ras-related protein Rab-5C (249 aa) initn: 1188 init1: 1188 opt: 1190 Z-score: 1300.7 bits: 248.0 E(85289): 1e-65 Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:34-249) 10 20 pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGES :..:. .::::: ..::::::::::::: NP_001 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES 10 20 30 40 50 60 30 40 50 60 70 80 pF1KB8 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: NP_001 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 70 80 90 100 110 120 90 100 110 120 130 140 pF1KB8 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ ::::::::::::::: .::::::.:::::::::::.:::::::::::::.:: ::..::: NP_001 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 130 140 150 160 170 180 150 160 170 180 190 200 pF1KB8 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNK ::::::::::::::::::::::..:.::::::::.:::: :: ::.:::::.:.. .. NP_001 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR 190 200 210 220 230 240 210 pF1KB8 SQCCSN :::::: NP_001 SQCCSN >>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is (215 aa) initn: 1178 init1: 1178 opt: 1178 Z-score: 1288.4 bits: 245.5 E(85289): 5e-65 Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215) 10 20 30 40 50 60 pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ :.::...:::: ..:::::::::::::::::::::::::::::::.:::::::::::: NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR .:::::::::::::::::::::::::::::::::::::::::::.:.:::::.::::::: NP_004 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK ::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.::::: NP_004 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK 130 140 150 160 170 180 190 200 210 pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN :::.:::: :. ..:.::::: : .: ...::::: NP_004 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 190 200 210 215 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 11:48:35 2016 done: Fri Nov 4 11:48:36 2016 Total Scan time: 4.640 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]