Result of FASTA (omim) for
pFN21AB8302
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8302, 225 aa
1>>>pF1KB8302 225 - 225 aa - 225 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4500+/-0.000368; mu= 13.5835+/- 0.023
mean_var=83.3262+/-15.678, 0's: 0 Z-trim(115.2): 190 B-trim: 50 in 2/50
Lambda= 0.140502
statistics sampled from 25294 (25524) to 25294 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.299), width: 16
Scan time: 5.900
The best scores are: opt bits E(85289)
NP_775286 (OMIM: 604661) Kv channel-interacting pr ( 225) 1504 314.3 1e-85
XP_011538033 (OMIM: 604661) PREDICTED: Kv channel- ( 230) 1407 294.7 8.7e-80
NP_775283 (OMIM: 604661) Kv channel-interacting pr ( 270) 1316 276.3 3.5e-74
NP_055406 (OMIM: 604661) Kv channel-interacting pr ( 285) 1316 276.3 3.7e-74
NP_775284 (OMIM: 604661) Kv channel-interacting pr ( 252) 1305 274.0 1.6e-73
NP_775287 (OMIM: 604661) Kv channel-interacting pr ( 220) 1301 273.2 2.5e-73
XP_016871650 (OMIM: 604661) PREDICTED: Kv channel- ( 230) 1301 273.2 2.6e-73
NP_775285 (OMIM: 604661) Kv channel-interacting pr ( 227) 1277 268.3 7.4e-72
XP_006717875 (OMIM: 604661) PREDICTED: Kv channel- ( 275) 1219 256.6 3e-68
XP_005269786 (OMIM: 604661) PREDICTED: Kv channel- ( 257) 1208 254.4 1.3e-67
XP_005269787 (OMIM: 604661) PREDICTED: Kv channel- ( 225) 1204 253.5 2.1e-67
NP_001030175 (OMIM: 608182) Kv channel-interacting ( 225) 1168 246.2 3.3e-65
XP_016864896 (OMIM: 604660) PREDICTED: Kv channel- ( 225) 1110 234.5 1.1e-61
NP_001030010 (OMIM: 604660) Kv channel-interacting ( 225) 1110 234.5 1.1e-61
NP_671710 (OMIM: 608182) Kv channel-interacting pr ( 216) 1106 233.6 1.9e-61
XP_005248247 (OMIM: 608182) PREDICTED: Kv channel- ( 233) 1102 232.9 3.6e-61
NP_671712 (OMIM: 608182) Kv channel-interacting pr ( 229) 1098 232.0 6.2e-61
NP_079497 (OMIM: 608182) Kv channel-interacting pr ( 250) 1090 230.4 2e-60
XP_011512187 (OMIM: 608182) PREDICTED: Kv channel- ( 232) 1079 228.2 9e-60
NP_671711 (OMIM: 608182) Kv channel-interacting pr ( 188) 1057 223.7 1.7e-58
NP_001030176 (OMIM: 608182) Kv channel-interacting ( 188) 1057 223.7 1.7e-58
XP_016864142 (OMIM: 608182) PREDICTED: Kv channel- ( 188) 1057 223.7 1.7e-58
NP_055407 (OMIM: 604660) Kv channel-interacting pr ( 216) 1031 218.4 7.3e-57
NP_038462 (OMIM: 604662) calsenilin isoform 1 [Hom ( 256) 1030 218.3 9.5e-57
NP_001030009 (OMIM: 604660) Kv channel-interacting ( 227) 1027 217.6 1.3e-56
NP_001030086 (OMIM: 604662) calsenilin isoform 2 p ( 230) 1019 216.0 4.1e-56
XP_011512188 (OMIM: 608182) PREDICTED: Kv channel- ( 223) 1017 215.6 5.3e-56
XP_011512185 (OMIM: 608182) PREDICTED: Kv channel- ( 240) 1013 214.8 9.9e-56
XP_011512186 (OMIM: 608182) PREDICTED: Kv channel- ( 236) 1009 214.0 1.7e-55
XP_011512184 (OMIM: 608182) PREDICTED: Kv channel- ( 257) 1001 212.4 5.6e-55
NP_001265269 (OMIM: 604660) Kv channel-interacting ( 188) 994 210.9 1.2e-54
XP_011512191 (OMIM: 608182) PREDICTED: Kv channel- ( 195) 968 205.6 4.7e-53
XP_011512189 (OMIM: 608182) PREDICTED: Kv channel- ( 195) 968 205.6 4.7e-53
NP_001265268 (OMIM: 604660) Kv channel-interacting ( 241) 664 144.1 2e-34
NP_775289 (OMIM: 604661) Kv channel-interacting pr ( 184) 597 130.4 2e-30
NP_055101 (OMIM: 603315) neuronal calcium sensor 1 ( 190) 596 130.2 2.3e-30
XP_016856607 (OMIM: 142622,224500) PREDICTED: neur ( 193) 563 123.5 2.4e-28
NP_002134 (OMIM: 142622,224500) neuron-specific ca ( 193) 563 123.5 2.4e-28
XP_005270849 (OMIM: 142622,224500) PREDICTED: neur ( 193) 563 123.5 2.4e-28
NP_001122298 (OMIM: 603315) neuronal calcium senso ( 172) 555 121.9 6.8e-28
NP_003376 (OMIM: 600817) visinin-like protein 1 [H ( 191) 546 120.1 2.6e-27
NP_001035715 (OMIM: 606722) neurocalcin-delta [Hom ( 193) 544 119.7 3.5e-27
XP_011515634 (OMIM: 606722) PREDICTED: neurocalcin ( 193) 544 119.7 3.5e-27
NP_001035719 (OMIM: 606722) neurocalcin-delta [Hom ( 193) 544 119.7 3.5e-27
XP_011515635 (OMIM: 606722) PREDICTED: neurocalcin ( 193) 544 119.7 3.5e-27
NP_001035717 (OMIM: 606722) neurocalcin-delta [Hom ( 193) 544 119.7 3.5e-27
XP_016869391 (OMIM: 606722) PREDICTED: neurocalcin ( 193) 544 119.7 3.5e-27
NP_001035714 (OMIM: 606722) neurocalcin-delta [Hom ( 193) 544 119.7 3.5e-27
XP_016869390 (OMIM: 606722) PREDICTED: neurocalcin ( 193) 544 119.7 3.5e-27
NP_114430 (OMIM: 606722) neurocalcin-delta [Homo s ( 193) 544 119.7 3.5e-27
>>NP_775286 (OMIM: 604661) Kv channel-interacting protei (225 aa)
initn: 1504 init1: 1504 opt: 1504 Z-score: 1659.8 bits: 314.3 E(85289): 1e-85
Smith-Waterman score: 1504; 99.1% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_775 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
NP_775 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>XP_011538033 (OMIM: 604661) PREDICTED: Kv channel-inte (230 aa)
initn: 1407 init1: 1407 opt: 1407 Z-score: 1553.4 bits: 294.7 E(85289): 8.7e-80
Smith-Waterman score: 1407; 99.0% identity (99.0% similar) in 210 aa overlap (1-210:1-210)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_011 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: :::::::::
XP_011 REHVESFFQKMDRNKDGVVTIEEFIESCQKVYPHPTPPWGLEGSKSLGIQ
190 200 210 220 230
>>NP_775283 (OMIM: 604661) Kv channel-interacting protei (270 aa)
initn: 1316 init1: 1316 opt: 1316 Z-score: 1452.8 bits: 276.3 E(85289): 3.5e-74
Smith-Waterman score: 1316; 98.5% identity (99.0% similar) in 199 aa overlap (27-225:72-270)
10 20 30 40 50
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTK
:.::::::::: ::::::::::::::::::
NP_775 LLPCCGPQALPSVSETLAAPASLRPHRPRLLDPDSVDDEFELSTVCHRPEGLEQLQEQTK
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB8 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
110 120 130 140 150 160
120 130 140 150 160 170
pF1KB8 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
170 180 190 200 210 220
180 190 200 210 220
pF1KB8 EEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::::::: ::::::::::::::::::::::::
NP_775 EEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
230 240 250 260 270
>>NP_055406 (OMIM: 604661) Kv channel-interacting protei (285 aa)
initn: 1316 init1: 1316 opt: 1316 Z-score: 1452.4 bits: 276.3 E(85289): 3.7e-74
Smith-Waterman score: 1316; 98.5% identity (99.0% similar) in 199 aa overlap (27-225:87-285)
10 20 30 40 50
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTK
:.::::::::: ::::::::::::::::::
NP_055 IGRVFRFLGDSSLPSALAAPASLRPHRPRLLDPDSVDDEFELSTVCHRPEGLEQLQEQTK
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB8 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB8 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
180 190 200 210 220 230
180 190 200 210 220
pF1KB8 EEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::::::: ::::::::::::::::::::::::
NP_055 EEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
240 250 260 270 280
>>NP_775284 (OMIM: 604661) Kv channel-interacting protei (252 aa)
initn: 1305 init1: 1305 opt: 1305 Z-score: 1441.1 bits: 274.0 E(85289): 1.6e-73
Smith-Waterman score: 1305; 97.5% identity (98.5% similar) in 200 aa overlap (26-225:53-252)
10 20 30 40 50
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQT
:.: .::::::: :::::::::::::::::
NP_775 LTGHPPGPTKKALKQRFLKLLPCCGPQALPSVSENSVDDEFELSTVCHRPEGLEQLQEQT
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB8 KFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 KFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSV
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB8 SFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 SFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPAL
150 160 170 180 190 200
180 190 200 210 220
pF1KB8 REEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
::::::::::::::::::::::::: ::::::::::::::::::::::::
NP_775 REEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
210 220 230 240 250
>>NP_775287 (OMIM: 604661) Kv channel-interacting protei (220 aa)
initn: 1301 init1: 1301 opt: 1301 Z-score: 1437.6 bits: 273.2 E(85289): 2.5e-73
Smith-Waterman score: 1301; 99.0% identity (99.0% similar) in 196 aa overlap (30-225:25-220)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
:::::::: ::::::::::::::::::::::
NP_775 MRGQGRKESLSDSRDLDGSYDQLTDSVDDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
120 130 140 150 160 170
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
NP_775 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
180 190 200 210 220
>>XP_016871650 (OMIM: 604661) PREDICTED: Kv channel-inte (230 aa)
initn: 1301 init1: 1301 opt: 1301 Z-score: 1437.3 bits: 273.2 E(85289): 2.6e-73
Smith-Waterman score: 1301; 99.0% identity (99.0% similar) in 196 aa overlap (30-225:35-230)
10 20 30 40 50
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTR
:::::::: :::::::::::::::::::::
XP_016 GLEMVAVLVVLALFVKVLEQFGLFEPVSLEDSVDDEFELSTVCHRPEGLEQLQEQTKFTR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 KELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 FVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEA
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 PREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
::::::::::::::::::::: ::::::::::::::::::::::::
XP_016 PREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220 230
>>NP_775285 (OMIM: 604661) Kv channel-interacting protei (227 aa)
initn: 1287 init1: 1029 opt: 1277 Z-score: 1411.1 bits: 268.3 E(85289): 7.4e-72
Smith-Waterman score: 1277; 95.6% identity (95.6% similar) in 203 aa overlap (30-225:25-227)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
:::::::: ::::::::::::::::::::::
NP_775 MRGQGRKESLSDSRDLDGSYDQLTDSVDDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50
70 80 90 100 110
pF1KB8 ELQVLYRGFKN-------ECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDG
::::::::::: ::::::::::::::::::::::::::::::::::::::::::
NP_775 ELQVLYRGFKNPGALSFQECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 SVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_775 SVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYP
120 130 140 150 160 170
180 190 200 210 220
pF1KB8 ALREEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
::::::::::::::::::::::::::: ::::::::::::::::::::::::
NP_775 ALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
180 190 200 210 220
>>XP_006717875 (OMIM: 604661) PREDICTED: Kv channel-inte (275 aa)
initn: 1219 init1: 1219 opt: 1219 Z-score: 1346.4 bits: 256.6 E(85289): 3e-68
Smith-Waterman score: 1219; 98.4% identity (98.9% similar) in 184 aa overlap (27-210:72-255)
10 20 30 40 50
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTK
:.::::::::: ::::::::::::::::::
XP_006 LLPCCGPQALPSVSETLAAPASLRPHRPRLLDPDSVDDEFELSTVCHRPEGLEQLQEQTK
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB8 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
110 120 130 140 150 160
120 130 140 150 160 170
pF1KB8 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
170 180 190 200 210 220
180 190 200 210 220
pF1KB8 EEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::::::: :::::::::
XP_006 EEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKVYPHPTPPWGLEGSKSLGIQ
230 240 250 260 270
>>XP_005269786 (OMIM: 604661) PREDICTED: Kv channel-inte (257 aa)
initn: 1208 init1: 1208 opt: 1208 Z-score: 1334.7 bits: 254.4 E(85289): 1.3e-67
Smith-Waterman score: 1208; 97.3% identity (98.4% similar) in 185 aa overlap (26-210:53-237)
10 20 30 40 50
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQT
:.: .::::::: :::::::::::::::::
XP_005 LTGHPPGPTKKALKQRFLKLLPCCGPQALPSVSENSVDDEFELSTVCHRPEGLEQLQEQT
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB8 KFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSV
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB8 SFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPAL
150 160 170 180 190 200
180 190 200 210 220
pF1KB8 REEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
::::::::::::::::::::::::: :::::::::
XP_005 REEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKVYPHPTPPWGLEGSKSLGIQ
210 220 230 240 250
225 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:32:36 2016 done: Fri Nov 4 11:32:37 2016
Total Scan time: 5.900 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]