Result of FASTA (omim) for
pFN21AB8291
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8291, 472 aa
1>>>pF1KB8291 472 - 472 aa - 472 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6233+/-0.000329; mu= 4.5919+/- 0.021
mean_var=191.6297+/-38.401, 0's: 0 Z-trim(122.2): 108 B-trim: 401 in 1/58
Lambda= 0.092649
statistics sampled from 39786 (39897) to 39786 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.468), width: 16
Scan time: 10.160
The best scores are: opt bits E(85289)
NP_071345 (OMIM: 613066) homeobox protein PKNOX2 [ ( 472) 3133 430.8 4.1e-120
XP_011541247 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 3133 430.8 4.1e-120
XP_011541246 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 3133 430.8 4.1e-120
XP_005271699 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 3133 430.8 4.1e-120
XP_016873599 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 3133 430.8 4.1e-120
XP_005271700 (OMIM: 613066) PREDICTED: homeobox pr ( 443) 2924 402.8 9.9e-112
XP_011541249 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 2228 309.7 8.1e-84
XP_006718957 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 2228 309.7 8.1e-84
XP_016873600 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 2228 309.7 8.1e-84
XP_011541248 (OMIM: 613066) PREDICTED: homeobox pr ( 356) 1334 190.2 7.9e-48
XP_016873601 (OMIM: 613066) PREDICTED: homeobox pr ( 327) 1125 162.3 1.9e-39
NP_001273187 (OMIM: 602100) homeobox protein PKNOX ( 319) 951 139.0 1.9e-32
NP_004562 (OMIM: 602100) homeobox protein PKNOX1 i ( 436) 794 118.1 5e-26
NP_001307623 (OMIM: 602100) homeobox protein PKNOX ( 435) 792 117.8 6e-26
XP_016859632 (OMIM: 601739) PREDICTED: homeobox pr ( 352) 413 67.1 8.9e-11
XP_016859631 (OMIM: 601739) PREDICTED: homeobox pr ( 417) 413 67.2 1e-10
XP_016859630 (OMIM: 601739) PREDICTED: homeobox pr ( 433) 413 67.2 1.1e-10
XP_016859635 (OMIM: 601739) PREDICTED: homeobox pr ( 246) 386 63.4 8.2e-10
XP_005264382 (OMIM: 601739) PREDICTED: homeobox pr ( 325) 386 63.5 1e-09
NP_002389 (OMIM: 601739) homeobox protein Meis1 [H ( 390) 386 63.5 1.2e-09
XP_005264380 (OMIM: 601739) PREDICTED: homeobox pr ( 406) 386 63.5 1.2e-09
XP_016859634 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 382 62.9 1.5e-09
XP_016859633 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 382 62.9 1.5e-09
XP_006720592 (OMIM: 601740) PREDICTED: homeobox pr ( 255) 380 62.6 1.5e-09
NP_758527 (OMIM: 601740) homeobox protein Meis2 is ( 306) 381 62.8 1.6e-09
XP_016877694 (OMIM: 601740) PREDICTED: homeobox pr ( 306) 381 62.8 1.6e-09
XP_005264381 (OMIM: 601739) PREDICTED: homeobox pr ( 400) 382 63.0 1.8e-09
XP_006720590 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 380 62.7 1.8e-09
XP_011519893 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 380 62.7 1.8e-09
NP_002390 (OMIM: 601740) homeobox protein Meis2 is ( 381) 381 62.8 1.8e-09
XP_006720588 (OMIM: 601740) PREDICTED: homeobox pr ( 393) 381 62.9 1.9e-09
NP_733774 (OMIM: 601740) homeobox protein Meis2 is ( 394) 381 62.9 1.9e-09
XP_005264379 (OMIM: 601739) PREDICTED: homeobox pr ( 465) 382 63.0 2e-09
XP_005264378 (OMIM: 601739) PREDICTED: homeobox pr ( 481) 382 63.0 2e-09
NP_758526 (OMIM: 601740) homeobox protein Meis2 is ( 388) 380 62.7 2.1e-09
XP_006720589 (OMIM: 601740) PREDICTED: homeobox pr ( 389) 380 62.7 2.1e-09
XP_006720587 (OMIM: 601740) PREDICTED: homeobox pr ( 400) 380 62.7 2.1e-09
NP_733777 (OMIM: 601740) homeobox protein Meis2 is ( 401) 380 62.7 2.1e-09
NP_733776 (OMIM: 601740) homeobox protein Meis2 is ( 470) 380 62.8 2.4e-09
NP_001207411 (OMIM: 601740) homeobox protein Meis2 ( 470) 380 62.8 2.4e-09
XP_006720586 (OMIM: 601740) PREDICTED: homeobox pr ( 476) 380 62.8 2.4e-09
NP_733775 (OMIM: 601740) homeobox protein Meis2 is ( 477) 380 62.8 2.4e-09
NP_620410 (OMIM: 300411) homeobox protein TGIF2LX ( 241) 280 49.2 1.5e-05
NP_631960 (OMIM: 400025) homeobox protein TGIF2LY ( 185) 270 47.8 3e-05
NP_775299 (OMIM: 142946,602630) homeobox protein T ( 286) 269 47.8 4.7e-05
NP_777480 (OMIM: 142946,602630) homeobox protein T ( 252) 264 47.1 6.8e-05
XP_016881448 (OMIM: 142946,602630) PREDICTED: home ( 252) 264 47.1 6.8e-05
NP_775303 (OMIM: 142946,602630) homeobox protein T ( 252) 264 47.1 6.8e-05
XP_011524037 (OMIM: 142946,602630) PREDICTED: home ( 252) 264 47.1 6.8e-05
NP_775301 (OMIM: 142946,602630) homeobox protein T ( 252) 264 47.1 6.8e-05
>>NP_071345 (OMIM: 613066) homeobox protein PKNOX2 [Homo (472 aa)
initn: 3133 init1: 3133 opt: 3133 Z-score: 2277.5 bits: 430.8 E(85289): 4.1e-120
Smith-Waterman score: 3133; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
430 440 450 460 470
>>XP_011541247 (OMIM: 613066) PREDICTED: homeobox protei (472 aa)
initn: 3133 init1: 3133 opt: 3133 Z-score: 2277.5 bits: 430.8 E(85289): 4.1e-120
Smith-Waterman score: 3133; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
430 440 450 460 470
>>XP_011541246 (OMIM: 613066) PREDICTED: homeobox protei (472 aa)
initn: 3133 init1: 3133 opt: 3133 Z-score: 2277.5 bits: 430.8 E(85289): 4.1e-120
Smith-Waterman score: 3133; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
430 440 450 460 470
>>XP_005271699 (OMIM: 613066) PREDICTED: homeobox protei (472 aa)
initn: 3133 init1: 3133 opt: 3133 Z-score: 2277.5 bits: 430.8 E(85289): 4.1e-120
Smith-Waterman score: 3133; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
430 440 450 460 470
>>XP_016873599 (OMIM: 613066) PREDICTED: homeobox protei (472 aa)
initn: 3133 init1: 3133 opt: 3133 Z-score: 2277.5 bits: 430.8 E(85289): 4.1e-120
Smith-Waterman score: 3133; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
430 440 450 460 470
>>XP_005271700 (OMIM: 613066) PREDICTED: homeobox protei (443 aa)
initn: 2924 init1: 2924 opt: 2924 Z-score: 2126.9 bits: 402.8 E(85289): 9.9e-112
Smith-Waterman score: 2924; 100.0% identity (100.0% similar) in 443 aa overlap (30-472:1-443)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
:::::::::::::::::::::::::::::::
XP_005 MTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
340 350 360 370 380 390
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
400 410 420 430 440
>>XP_011541249 (OMIM: 613066) PREDICTED: homeobox protei (339 aa)
initn: 2228 init1: 2228 opt: 2228 Z-score: 1625.8 bits: 309.7 E(85289): 8.1e-84
Smith-Waterman score: 2228; 100.0% identity (100.0% similar) in 339 aa overlap (134-472:1-339)
110 120 130 140 150 160
pF1KB8 SFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYI
::::::::::::::::::::::::::::::
XP_011 MVKAIQVLRIHLLELEKVNELCKDFCNRYI
10 20 30
170 180 190 200 210 220
pF1KB8 TCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASAL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 QQGNIAMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQGNIAMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDN
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB8 RRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLD
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB8 NLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDL
280 290 300 310 320 330
470
pF1KB8 GLEHSDSLE
:::::::::
XP_011 GLEHSDSLE
>>XP_006718957 (OMIM: 613066) PREDICTED: homeobox protei (339 aa)
initn: 2228 init1: 2228 opt: 2228 Z-score: 1625.8 bits: 309.7 E(85289): 8.1e-84
Smith-Waterman score: 2228; 100.0% identity (100.0% similar) in 339 aa overlap (134-472:1-339)
110 120 130 140 150 160
pF1KB8 SFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYI
::::::::::::::::::::::::::::::
XP_006 MVKAIQVLRIHLLELEKVNELCKDFCNRYI
10 20 30
170 180 190 200 210 220
pF1KB8 TCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASAL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 QQGNIAMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQGNIAMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDN
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB8 RRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLD
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB8 NLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDL
280 290 300 310 320 330
470
pF1KB8 GLEHSDSLE
:::::::::
XP_006 GLEHSDSLE
>>XP_016873600 (OMIM: 613066) PREDICTED: homeobox protei (339 aa)
initn: 2228 init1: 2228 opt: 2228 Z-score: 1625.8 bits: 309.7 E(85289): 8.1e-84
Smith-Waterman score: 2228; 100.0% identity (100.0% similar) in 339 aa overlap (134-472:1-339)
110 120 130 140 150 160
pF1KB8 SFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYI
::::::::::::::::::::::::::::::
XP_016 MVKAIQVLRIHLLELEKVNELCKDFCNRYI
10 20 30
170 180 190 200 210 220
pF1KB8 TCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASAL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 QQGNIAMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQGNIAMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDN
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB8 RRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLD
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB8 NLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDL
280 290 300 310 320 330
470
pF1KB8 GLEHSDSLE
:::::::::
XP_016 GLEHSDSLE
>>XP_011541248 (OMIM: 613066) PREDICTED: homeobox protei (356 aa)
initn: 1479 init1: 1334 opt: 1334 Z-score: 979.7 bits: 190.2 E(85289): 7.9e-48
Smith-Waterman score: 2149; 75.4% identity (75.4% similar) in 472 aa overlap (1-472:1-356)
10 20 30 40 50 60
pF1KB8 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
::::::::::::::::
XP_011 GGPYSPNQPSINLHSQ--------------------------------------------
190
250 260 270 280 290 300
pF1KB8 GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
XP_011 ------------------------------------------------------------
310 320 330 340 350 360
pF1KB8 NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ------------HPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
200 210 220 230 240
370 380 390 400 410 420
pF1KB8 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
250 260 270 280 290 300
430 440 450 460 470
pF1KB8 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE
310 320 330 340 350
472 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:26:27 2016 done: Fri Nov 4 11:26:28 2016
Total Scan time: 10.160 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]