Result of FASTA (omim) for pFN21AB8236
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8236, 294 aa
  1>>>pF1KB8236 294 - 294 aa - 294 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.8271+/-0.000386; mu= -5.4029+/- 0.024
 mean_var=266.9149+/-53.316, 0's: 0 Z-trim(120.9): 67  B-trim: 0 in 0/59
 Lambda= 0.078503
 statistics sampled from 36783 (36869) to 36783 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.432), width:  16
 Scan time:  6.640

The best scores are:                                      opt bits E(85289)
NP_002511 (OMIM: 164040) nucleophosmin isoform 1 [ ( 294) 1953 233.9 2.8e-61
NP_001032827 (OMIM: 164040) nucleophosmin isoform  ( 259) 1692 204.3   2e-52
XP_011532866 (OMIM: 164040) PREDICTED: nucleophosm ( 230) 1522 185.0 1.2e-46
NP_954654 (OMIM: 164040) nucleophosmin isoform 2 [ ( 265) 1312 161.3 1.9e-39
XP_005265977 (OMIM: 164040) PREDICTED: nucleophosm ( 230) 1302 160.1 3.7e-39
NP_008924 (OMIM: 606456) nucleoplasmin-3 [Homo sap ( 178)  347 51.9 1.1e-06
XP_011542664 (OMIM: 608073) PREDICTED: nucleoplasm ( 214)  255 41.5  0.0017
XP_016868438 (OMIM: 608073) PREDICTED: nucleoplasm ( 214)  255 41.5  0.0017
NP_001273609 (OMIM: 608073) nucleoplasmin-2 isofor ( 214)  255 41.5  0.0017
NP_877724 (OMIM: 608073) nucleoplasmin-2 isoform 1 ( 214)  255 41.5  0.0017
XP_016868437 (OMIM: 608073) PREDICTED: nucleoplasm ( 214)  255 41.5  0.0017
XP_011542665 (OMIM: 608073) PREDICTED: nucleoplasm ( 214)  255 41.5  0.0017
XP_011542662 (OMIM: 608073) PREDICTED: nucleoplasm ( 289)  249 40.9  0.0035


>>NP_002511 (OMIM: 164040) nucleophosmin isoform 1 [Homo  (294 aa)
 initn: 1953 init1: 1953 opt: 1953  Z-score: 1221.1  bits: 233.9 E(85289): 2.8e-61
Smith-Waterman score: 1953; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)

               10        20        30        40        50        60
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
              190       200       210       220       230       240

              250       260       270       280       290    
pF1KB8 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
              250       260       270       280       290    

>>NP_001032827 (OMIM: 164040) nucleophosmin isoform 3 [H  (259 aa)
 initn: 1692 init1: 1692 opt: 1692  Z-score: 1062.1  bits: 204.3 E(85289): 2e-52
Smith-Waterman score: 1692; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257)

               10        20        30        40        50        60
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
              190       200       210       220       230       240

              250       260       270       280       290    
pF1KB8 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
       :::::::::::::::::                                     
NP_001 PSSVEDIKAKMQASIEKAH                                   
              250                                            

>>XP_011532866 (OMIM: 164040) PREDICTED: nucleophosmin i  (230 aa)
 initn: 1522 init1: 1522 opt: 1522  Z-score: 958.7  bits: 185.0 E(85289): 1.2e-46
Smith-Waterman score: 1522; 100.0% identity (100.0% similar) in 230 aa overlap (65-294:1-230)

           40        50        60        70        80        90    
pF1KB8 NDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEI
                                     ::::::::::::::::::::::::::::::
XP_011                               MNYEGSPIKVTLATLKMSVQPTVSLGGFEI
                                             10        20        30

          100       110       120       130       140       150    
pF1KB8 TPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQK
               40        50        60        70        80        90

          160       170       180       190       200       210    
pF1KB8 KVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDS
              100       110       120       130       140       150

          220       230       240       250       260       270    
pF1KB8 KPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKN
              160       170       180       190       200       210

          280       290    
pF1KB8 CFRMTDQEAIQDLWQWRKSL
       ::::::::::::::::::::
XP_011 CFRMTDQEAIQDLWQWRKSL
              220       230

>>NP_954654 (OMIM: 164040) nucleophosmin isoform 2 [Homo  (265 aa)
 initn: 1287 init1: 1287 opt: 1312  Z-score: 829.3  bits: 161.3 E(85289): 1.9e-39
Smith-Waterman score: 1697; 90.1% identity (90.1% similar) in 294 aa overlap (1-294:1-265)

               10        20        30        40        50        60
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
       ::::::::::::::                             :::::::::::::::::
NP_954 FDDEEAEEKAPVKK-----------------------------GQESFKKQEKTPKTPKG
              190                                    200       210 

              250       260       270       280       290    
pF1KB8 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
             220       230       240       250       260     

>>XP_005265977 (OMIM: 164040) PREDICTED: nucleophosmin i  (230 aa)
 initn: 1287 init1: 1287 opt: 1302  Z-score: 824.1  bits: 160.1 E(85289): 3.7e-39
Smith-Waterman score: 1436; 88.7% identity (88.7% similar) in 257 aa overlap (1-257:1-228)

               10        20        30        40        50        60
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
       ::::::::::::::                             :::::::::::::::::
XP_005 FDDEEAEEKAPVKK-----------------------------GQESFKKQEKTPKTPKG
              190                                    200       210 

              250       260       270       280       290    
pF1KB8 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
       :::::::::::::::::                                     
XP_005 PSSVEDIKAKMQASIEKAH                                   
             220       230                                   

>>NP_008924 (OMIM: 606456) nucleoplasmin-3 [Homo sapiens  (178 aa)
 initn: 344 init1: 280 opt: 347  Z-score: 241.1  bits: 51.9 E(85289): 1.1e-06
Smith-Waterman score: 347; 40.8% identity (70.7% similar) in 147 aa overlap (10-146:30-176)

                                   10        20         30         
pF1KB8                     MEDSMDMDMSPLRPQNYLFGCELKAD-KDYHFKVDN-DEN
                                    .:.  ....:::::..  ... :::.. :. 
NP_008 MAAGTAAALAFLSQESRTRAGGVGGLRVPAPVTMDSFFFGCELSGHTRSFTFKVEEEDDA
               10        20        30        40        50        60

       40        50        60        70        80        90        
pF1KB8 EHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPV
       :: :.:  . :  ::::: ..::. : :.. . : : .:.::.: :: .::  :.. :::
NP_008 EHVLALTMLCLTEGAKDECNVVEVVARNHDHQEIAVPVANLKLSCQPMLSLDDFQLQPPV
               70        80        90       100       110       120

      100       110             120         130       140       150
pF1KB8 VLRLKCGSGPVHISGQHLVAV------EEDAESEDEE--EEDVKLLSISGKRSAPGGGSK
       ..::: :::::.:.:.: ...      ::..: :.:.  ::.:.:  :   ..  :    
NP_008 TFRLKSGSGPVRITGRHQIVTMSNDVSEEESEEEEEDSDEEEVELCPILPAKKQGGRP  
              130       140       150       160       170          

              160       170       180       190       200       210
pF1KB8 VPQKKVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQN

>>XP_011542664 (OMIM: 608073) PREDICTED: nucleoplasmin-2  (214 aa)
 initn: 327 init1: 175 opt: 255  Z-score: 183.7  bits: 41.5 E(85289): 0.0017
Smith-Waterman score: 288; 31.1% identity (56.1% similar) in 228 aa overlap (18-241:18-210)

               10        20         30        40         50        
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADK-DYHFKVDNDENEH-QLSLRTVSLGAGAKDELH
                        :.::::. ..  . :. . . ..  .: :.:. ::  ::.:.:
XP_011 MNLSSASSTEEKAVTTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMH
               10        20        30        40        50        60

       60         70         80        90       100       110      
pF1KB8 IVEA-EAMNYEGSPIK-VTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
        ::     : : . .. ::.:.:. :: : ::. : ...:::...:. ::::: .:::. 
XP_011 RVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 VAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDD
         .  :   :.::::                              : .....::.::::.
XP_011 YEAS-DLTWEEEEEE------------------------------EGEEEEEEEEDDEDE
               130                                     140         

        180       190       200       210       220       230      
pF1KB8 DDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPK
       : :       ::..:::.  : .: :.:. ....  ...      :  ..:  :. :.  
XP_011 DADI----SLEEQSPVKQVKRLVPQKQASVAKKKKLEKEEEEIRASVRDKSPVKKAKATA
     150           160       170       180       190       200     

        240       250       260       270       280       290    
pF1KB8 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
         : :                                                     
XP_011 RAKKPGFKK                                                 
         210                                                     

>>XP_016868438 (OMIM: 608073) PREDICTED: nucleoplasmin-2  (214 aa)
 initn: 327 init1: 175 opt: 255  Z-score: 183.7  bits: 41.5 E(85289): 0.0017
Smith-Waterman score: 288; 31.1% identity (56.1% similar) in 228 aa overlap (18-241:18-210)

               10        20         30        40         50        
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADK-DYHFKVDNDENEH-QLSLRTVSLGAGAKDELH
                        :.::::. ..  . :. . . ..  .: :.:. ::  ::.:.:
XP_016 MNLSSASSTEEKAVTTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMH
               10        20        30        40        50        60

       60         70         80        90       100       110      
pF1KB8 IVEA-EAMNYEGSPIK-VTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
        ::     : : . .. ::.:.:. :: : ::. : ...:::...:. ::::: .:::. 
XP_016 RVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 VAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDD
         .  :   :.::::                              : .....::.::::.
XP_016 YEAS-DLTWEEEEEE------------------------------EGEEEEEEEEDDEDE
               130                                     140         

        180       190       200       210       220       230      
pF1KB8 DDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPK
       : :       ::..:::.  : .: :.:. ....  ...      :  ..:  :. :.  
XP_016 DADI----SLEEQSPVKQVKRLVPQKQASVAKKKKLEKEEEEIRASVRDKSPVKKAKATA
     150           160       170       180       190       200     

        240       250       260       270       280       290    
pF1KB8 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
         : :                                                     
XP_016 RAKKPGFKK                                                 
         210                                                     

>>NP_001273609 (OMIM: 608073) nucleoplasmin-2 isoform 1   (214 aa)
 initn: 327 init1: 175 opt: 255  Z-score: 183.7  bits: 41.5 E(85289): 0.0017
Smith-Waterman score: 288; 31.1% identity (56.1% similar) in 228 aa overlap (18-241:18-210)

               10        20         30        40         50        
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADK-DYHFKVDNDENEH-QLSLRTVSLGAGAKDELH
                        :.::::. ..  . :. . . ..  .: :.:. ::  ::.:.:
NP_001 MNLSSASSTEEKAVTTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMH
               10        20        30        40        50        60

       60         70         80        90       100       110      
pF1KB8 IVEA-EAMNYEGSPIK-VTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
        ::     : : . .. ::.:.:. :: : ::. : ...:::...:. ::::: .:::. 
NP_001 RVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 VAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDD
         .  :   :.::::                              : .....::.::::.
NP_001 YEAS-DLTWEEEEEE------------------------------EGEEEEEEEEDDEDE
               130                                     140         

        180       190       200       210       220       230      
pF1KB8 DDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPK
       : :       ::..:::.  : .: :.:. ....  ...      :  ..:  :. :.  
NP_001 DADI----SLEEQSPVKQVKRLVPQKQASVAKKKKLEKEEEEIRASVRDKSPVKKAKATA
     150           160       170       180       190       200     

        240       250       260       270       280       290    
pF1KB8 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
         : :                                                     
NP_001 RAKKPGFKK                                                 
         210                                                     

>>NP_877724 (OMIM: 608073) nucleoplasmin-2 isoform 1 [Ho  (214 aa)
 initn: 327 init1: 175 opt: 255  Z-score: 183.7  bits: 41.5 E(85289): 0.0017
Smith-Waterman score: 288; 31.1% identity (56.1% similar) in 228 aa overlap (18-241:18-210)

               10        20         30        40         50        
pF1KB8 MEDSMDMDMSPLRPQNYLFGCELKADK-DYHFKVDNDENEH-QLSLRTVSLGAGAKDELH
                        :.::::. ..  . :. . . ..  .: :.:. ::  ::.:.:
NP_877 MNLSSASSTEEKAVTTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMH
               10        20        30        40        50        60

       60         70         80        90       100       110      
pF1KB8 IVEA-EAMNYEGSPIK-VTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
        ::     : : . .. ::.:.:. :: : ::. : ...:::...:. ::::: .:::. 
NP_877 RVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 VAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDD
         .  :   :.::::                              : .....::.::::.
NP_877 YEAS-DLTWEEEEEE------------------------------EGEEEEEEEEDDEDE
               130                                     140         

        180       190       200       210       220       230      
pF1KB8 DDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPK
       : :       ::..:::.  : .: :.:. ....  ...      :  ..:  :. :.  
NP_877 DADI----SLEEQSPVKQVKRLVPQKQASVAKKKKLEKEEEEIRASVRDKSPVKKAKATA
     150           160       170       180       190       200     

        240       250       260       270       280       290    
pF1KB8 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
         : :                                                     
NP_877 RAKKPGFKK                                                 
         210                                                     




294 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 10:50:49 2016 done: Fri Nov  4 10:50:50 2016
 Total Scan time:  6.640 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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