Result of FASTA (omim) for
pFN21AB7620
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7620, 367 aa
1>>>pF1KB7620 367 - 367 aa - 367 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.8837+/-0.000394; mu= -12.6774+/- 0.024
mean_var=454.1853+/-95.074, 0's: 0 Z-trim(125.3): 69 B-trim: 877 in 1/55
Lambda= 0.060181
statistics sampled from 48501 (48587) to 48501 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.846), E-opt: 0.2 (0.57), width: 16
Scan time: 10.220
The best scores are: opt bits E(85289)
NP_001035373 (OMIM: 614806) doublesex- and mab-3-r ( 367) 2671 245.6 1.3e-64
XP_016882618 (OMIM: 614806) PREDICTED: doublesex- ( 372) 2671 245.6 1.4e-64
XP_016882616 (OMIM: 614806) PREDICTED: doublesex- ( 418) 2010 188.3 2.8e-47
XP_016882614 (OMIM: 614806) PREDICTED: doublesex- ( 418) 2010 188.3 2.8e-47
XP_016882617 (OMIM: 614806) PREDICTED: doublesex- ( 418) 2010 188.3 2.8e-47
XP_016882615 (OMIM: 614806) PREDICTED: doublesex- ( 418) 2010 188.3 2.8e-47
XP_016882613 (OMIM: 614806) PREDICTED: doublesex- ( 421) 2010 188.3 2.8e-47
XP_016882612 (OMIM: 614806) PREDICTED: doublesex- ( 423) 2010 188.3 2.8e-47
XP_011525516 (OMIM: 614806) PREDICTED: doublesex- ( 244) 1621 154.3 2.8e-37
XP_011525517 (OMIM: 614806) PREDICTED: doublesex- ( 244) 1621 154.3 2.8e-37
XP_011525518 (OMIM: 614806) PREDICTED: doublesex- ( 228) 1090 108.1 2e-23
NP_067063 (OMIM: 614754) doublesex- and mab-3-rela ( 472) 357 44.8 0.00049
NP_001124337 (OMIM: 604935) doublesex- and mab-3-r ( 226) 334 42.5 0.0011
XP_016869705 (OMIM: 604935) PREDICTED: doublesex- ( 226) 334 42.5 0.0011
NP_006548 (OMIM: 604935) doublesex- and mab-3-rela ( 226) 334 42.5 0.0011
XP_016869704 (OMIM: 604935) PREDICTED: doublesex- ( 561) 342 43.6 0.0014
NP_870987 (OMIM: 604935) doublesex- and mab-3-rela ( 561) 342 43.6 0.0014
XP_016869702 (OMIM: 604935) PREDICTED: doublesex- ( 561) 342 43.6 0.0014
XP_011515989 (OMIM: 604935) PREDICTED: doublesex- ( 561) 342 43.6 0.0014
XP_016869703 (OMIM: 604935) PREDICTED: doublesex- ( 561) 342 43.6 0.0014
XP_011515992 (OMIM: 604935) PREDICTED: doublesex- ( 561) 342 43.6 0.0014
XP_011540239 (OMIM: 614804) PREDICTED: doublesex- ( 542) 320 41.6 0.005
NP_115486 (OMIM: 614804) doublesex- and mab-3-rela ( 542) 320 41.6 0.005
XP_016869864 (OMIM: 602424) PREDICTED: doublesex- ( 215) 298 39.3 0.0096
>>NP_001035373 (OMIM: 614806) doublesex- and mab-3-relat (367 aa)
initn: 2671 init1: 2671 opt: 2671 Z-score: 1280.7 bits: 245.6 E(85289): 1.3e-64
Smith-Waterman score: 2671; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367)
10 20 30 40 50 60
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLARTSGPSEWQLQQEAAEALVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLARTSGPSEWQLQQEAAEALVG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRL
310 320 330 340 350 360
pF1KB7 GSISLLS
:::::::
NP_001 GSISLLS
>>XP_016882618 (OMIM: 614806) PREDICTED: doublesex- and (372 aa)
initn: 2671 init1: 2671 opt: 2671 Z-score: 1280.6 bits: 245.6 E(85289): 1.4e-64
Smith-Waterman score: 2671; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:6-372)
10 20 30 40 50
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRIRSMEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 GHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 GTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 WVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 TAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLARTSGPSEWQLQQEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLARTSGPSEWQLQQEAA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 EALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVAL
310 320 330 340 350 360
360
pF1KB7 HIGRLGSISLLS
::::::::::::
XP_016 HIGRLGSISLLS
370
>>XP_016882616 (OMIM: 614806) PREDICTED: doublesex- and (418 aa)
initn: 2079 init1: 2010 opt: 2010 Z-score: 969.8 bits: 188.3 E(85289): 2.8e-47
Smith-Waterman score: 2441; 87.2% identity (87.2% similar) in 399 aa overlap (1-348:1-399)
10 20 30 40 50 60
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
190 200 210 220 230 240
250 260 270
pF1KB7 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQ----------------------------
::::::::::::::::::::::::::::::::
XP_016 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQVLGKKWDLGPWEEVEPGEGKSRKLKEAG
250 260 270 280 290 300
280 290 300
pF1KB7 -----------------------ASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
:::::::::::::::::::::::::::::::::::::
XP_016 AEEHLEGGQKRGFPVCLSPFPLQASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
:::::::::::::::::::::::::::::::::::::::
XP_016 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
370 380 390 400 410
>>XP_016882614 (OMIM: 614806) PREDICTED: doublesex- and (418 aa)
initn: 2079 init1: 2010 opt: 2010 Z-score: 969.8 bits: 188.3 E(85289): 2.8e-47
Smith-Waterman score: 2441; 87.2% identity (87.2% similar) in 399 aa overlap (1-348:1-399)
10 20 30 40 50 60
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
190 200 210 220 230 240
250 260 270
pF1KB7 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQ----------------------------
::::::::::::::::::::::::::::::::
XP_016 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQVLGKKWDLGPWEEVEPGEGKSRKLKEAG
250 260 270 280 290 300
280 290 300
pF1KB7 -----------------------ASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
:::::::::::::::::::::::::::::::::::::
XP_016 AEEHLEGGQKRGFPVCLSPFPLQASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
:::::::::::::::::::::::::::::::::::::::
XP_016 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
370 380 390 400 410
>>XP_016882617 (OMIM: 614806) PREDICTED: doublesex- and (418 aa)
initn: 2079 init1: 2010 opt: 2010 Z-score: 969.8 bits: 188.3 E(85289): 2.8e-47
Smith-Waterman score: 2441; 87.2% identity (87.2% similar) in 399 aa overlap (1-348:1-399)
10 20 30 40 50 60
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
190 200 210 220 230 240
250 260 270
pF1KB7 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQ----------------------------
::::::::::::::::::::::::::::::::
XP_016 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQVLGKKWDLGPWEEVEPGEGKSRKLKEAG
250 260 270 280 290 300
280 290 300
pF1KB7 -----------------------ASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
:::::::::::::::::::::::::::::::::::::
XP_016 AEEHLEGGQKRGFPVCLSPFPLQASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
:::::::::::::::::::::::::::::::::::::::
XP_016 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
370 380 390 400 410
>>XP_016882615 (OMIM: 614806) PREDICTED: doublesex- and (418 aa)
initn: 2079 init1: 2010 opt: 2010 Z-score: 969.8 bits: 188.3 E(85289): 2.8e-47
Smith-Waterman score: 2441; 87.2% identity (87.2% similar) in 399 aa overlap (1-348:1-399)
10 20 30 40 50 60
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGHKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGTTQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWVPGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAPLS
190 200 210 220 230 240
250 260 270
pF1KB7 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQ----------------------------
::::::::::::::::::::::::::::::::
XP_016 GEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQVLGKKWDLGPWEEVEPGEGKSRKLKEAG
250 260 270 280 290 300
280 290 300
pF1KB7 -----------------------ASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
:::::::::::::::::::::::::::::::::::::
XP_016 AEEHLEGGQKRGFPVCLSPFPLQASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQAPR
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
:::::::::::::::::::::::::::::::::::::::
XP_016 VTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS
370 380 390 400 410
>>XP_016882613 (OMIM: 614806) PREDICTED: doublesex- and (421 aa)
initn: 2079 init1: 2010 opt: 2010 Z-score: 969.8 bits: 188.3 E(85289): 2.8e-47
Smith-Waterman score: 2441; 87.2% identity (87.2% similar) in 399 aa overlap (1-348:4-402)
10 20 30 40 50
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGSMEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLKGH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 KRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRKGT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 TQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGPWV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 PGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTA
190 200 210 220 230 240
240 250 260 270
pF1KB7 PLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQ-------------------------
:::::::::::::::::::::::::::::::::::
XP_016 PLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQVLGKKWDLGPWEEVEPGEGKSRKLK
250 260 270 280 290 300
280 290 300
pF1KB7 --------------------------ASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQ
::::::::::::::::::::::::::::::::::
XP_016 EAGAEEHLEGGQKRGFPVCLSPFPLQASGASCLARTSGPSEWQLQQEAAEALVGLKDSSQ
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 APRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLL
::::::::::::::::::::::::::::::::::::::::::
XP_016 APRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSISLL
370 380 390 400 410 420
pF1KB7 S
XP_016 S
>>XP_016882612 (OMIM: 614806) PREDICTED: doublesex- and (423 aa)
initn: 2079 init1: 2010 opt: 2010 Z-score: 969.8 bits: 188.3 E(85289): 2.8e-47
Smith-Waterman score: 2441; 87.2% identity (87.2% similar) in 399 aa overlap (1-348:6-404)
10 20 30 40 50
pF1KB7 MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRIRSMEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCARCRNHGVTAHLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 GHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRRGEASPKAPNHFRK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 GTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTPVPPGP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 WVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVL
190 200 210 220 230 240
240 250 260 270
pF1KB7 TAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQ-----------------------
:::::::::::::::::::::::::::::::::::::
XP_016 TAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQVLGKKWDLGPWEEVEPGEGKSRK
250 260 270 280 290 300
280 290 300
pF1KB7 ----------------------------ASGASCLARTSGPSEWQLQQEAAEALVGLKDS
::::::::::::::::::::::::::::::::
XP_016 LKEAGAEEHLEGGQKRGFPVCLSPFPLQASGASCLARTSGPSEWQLQQEAAEALVGLKDS
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB7 SQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSIS
::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSPAPSVALHIGRLGSIS
370 380 390 400 410 420
pF1KB7 LLS
XP_016 LLS
>>XP_011525516 (OMIM: 614806) PREDICTED: doublesex- and (244 aa)
initn: 1617 init1: 1617 opt: 1621 Z-score: 790.3 bits: 154.3 E(85289): 2.8e-37
Smith-Waterman score: 1621; 94.1% identity (96.2% similar) in 237 aa overlap (131-367:11-244)
110 120 130 140 150 160
pF1KB7 RRGEASPKAPNHFRKGTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHP
: .:... : : : .:::::::::::
XP_011 MGQSCWHRHPPGSLVPNSS--LCPLPL-QNSCGPLLLSHP
10 20 30
170 180 190 200 210 220
pF1KB7 PEASPLSWTPVPPGPWVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEASPLSWTPVPPGPWVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 THGPFTTCPGSHPVLTAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THGPFTTCPGSHPVLTAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLA
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 RTSGPSEWQLQQEAAEALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTSGPSEWQLQQEAAEALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQP
160 170 180 190 200 210
350 360
pF1KB7 VGPCLRPSPAPSVALHIGRLGSISLLS
:::::::::::::::::::::::::::
XP_011 VGPCLRPSPAPSVALHIGRLGSISLLS
220 230 240
>>XP_011525517 (OMIM: 614806) PREDICTED: doublesex- and (244 aa)
initn: 1617 init1: 1617 opt: 1621 Z-score: 790.3 bits: 154.3 E(85289): 2.8e-37
Smith-Waterman score: 1621; 94.1% identity (96.2% similar) in 237 aa overlap (131-367:11-244)
110 120 130 140 150 160
pF1KB7 RRGEASPKAPNHFRKGTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHP
: .:... : : : .:::::::::::
XP_011 MGQSCWHRHPPGSLVPNSS--LCPLPL-QNSCGPLLLSHP
10 20 30
170 180 190 200 210 220
pF1KB7 PEASPLSWTPVPPGPWVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEASPLSWTPVPPGPWVPGHWLPPGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQLP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 THGPFTTCPGSHPVLTAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THGPFTTCPGSHPVLTAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGASCLA
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 RTSGPSEWQLQQEAAEALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTSGPSEWQLQQEAAEALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAGGRGFQP
160 170 180 190 200 210
350 360
pF1KB7 VGPCLRPSPAPSVALHIGRLGSISLLS
:::::::::::::::::::::::::::
XP_011 VGPCLRPSPAPSVALHIGRLGSISLLS
220 230 240
367 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:59:35 2016 done: Fri Nov 4 08:59:37 2016
Total Scan time: 10.220 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]