Result of FASTA (omim) for
pFN21AB7393
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7393, 414 aa
1>>>pF1KB7393 414 - 414 aa - 414 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0850+/-0.000495; mu= 13.3586+/- 0.030
mean_var=118.7233+/-26.208, 0's: 0 Z-trim(111.3): 283 B-trim: 732 in 1/51
Lambda= 0.117708
statistics sampled from 19453 (19836) to 19453 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.233), width: 16
Scan time: 8.830
The best scores are: opt bits E(85289)
NP_689542 (OMIM: 609193) leucine-rich repeat prote ( 414) 2728 475.1 1.4e-133
NP_982292 (OMIM: 609193) leucine-rich repeat prote ( 146) 621 116.9 3.4e-26
XP_016875972 (OMIM: 610368) PREDICTED: leucine-ric ( 731) 265 57.1 1.7e-07
NP_001157685 (OMIM: 610368) leucine-rich repeat an ( 696) 259 56.0 3.4e-07
NP_055931 (OMIM: 610368) leucine-rich repeat and c ( 728) 259 56.0 3.5e-07
NP_001157683 (OMIM: 610368) leucine-rich repeat an ( 763) 259 56.1 3.6e-07
NP_036557 (OMIM: 179555) ras suppressor protein 1 ( 277) 250 54.1 5e-07
NP_689937 (OMIM: 179555) ras suppressor protein 1 ( 224) 242 52.7 1.1e-06
NP_060573 (OMIM: 612890) volume-regulated anion ch ( 858) 250 54.6 1.1e-06
XP_016857090 (OMIM: 612890) PREDICTED: volume-regu ( 858) 250 54.6 1.1e-06
XP_016857089 (OMIM: 612890) PREDICTED: volume-regu ( 858) 250 54.6 1.1e-06
NP_001127951 (OMIM: 612890) volume-regulated anion ( 858) 250 54.6 1.1e-06
XP_016857088 (OMIM: 612890) PREDICTED: volume-regu ( 858) 250 54.6 1.1e-06
XP_016857091 (OMIM: 612890) PREDICTED: volume-regu ( 858) 250 54.6 1.1e-06
XP_011539991 (OMIM: 612890) PREDICTED: volume-regu ( 858) 250 54.6 1.1e-06
XP_016866486 (OMIM: 608195) PREDICTED: leucine-ric ( 331) 239 52.3 2.1e-06
XP_011513028 (OMIM: 608195) PREDICTED: leucine-ric ( 524) 239 52.5 2.9e-06
NP_060684 (OMIM: 608195) leucine-rich repeat-conta ( 524) 239 52.5 2.9e-06
NP_001255968 (OMIM: 602775,607721) leucine-rich re ( 536) 234 51.7 5.3e-06
XP_016872191 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 234 51.7 5.6e-06
XP_016872192 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 234 51.7 5.6e-06
NP_001311266 (OMIM: 602775,607721) leucine-rich re ( 582) 234 51.7 5.6e-06
NP_001311265 (OMIM: 602775,607721) leucine-rich re ( 582) 234 51.7 5.6e-06
NP_031399 (OMIM: 602775,607721) leucine-rich repea ( 582) 234 51.7 5.6e-06
XP_016872193 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 234 51.7 5.6e-06
XP_011513029 (OMIM: 608195) PREDICTED: leucine-ric ( 465) 231 51.1 6.8e-06
XP_005252609 (OMIM: 179555) PREDICTED: ras suppres ( 277) 219 48.9 1.9e-05
XP_011542154 (OMIM: 605352) PREDICTED: malignant f (1003) 220 49.6 4.3e-05
NP_004216 (OMIM: 605352) malignant fibrous histioc (1052) 220 49.6 4.4e-05
XP_006717379 (OMIM: 610933,614436) PREDICTED: E3 u ( 690) 216 48.7 5.3e-05
NP_001177652 (OMIM: 610933,614436) E3 ubiquitin-pr ( 696) 216 48.7 5.3e-05
NP_001005374 (OMIM: 610933,614436) E3 ubiquitin-pr ( 723) 216 48.7 5.4e-05
NP_001005373 (OMIM: 610933,614436) E3 ubiquitin-pr ( 723) 216 48.7 5.4e-05
NP_612370 (OMIM: 610933,614436) E3 ubiquitin-prote ( 723) 216 48.7 5.4e-05
XP_016870772 (OMIM: 610933,614436) PREDICTED: E3 u ( 723) 216 48.7 5.4e-05
XP_005252152 (OMIM: 608360,613506) PREDICTED: volu ( 810) 216 48.8 5.9e-05
XP_011517166 (OMIM: 608360,613506) PREDICTED: volu ( 810) 216 48.8 5.9e-05
XP_011517165 (OMIM: 608360,613506) PREDICTED: volu ( 810) 216 48.8 5.9e-05
NP_001120717 (OMIM: 608360,613506) volume-regulate ( 810) 216 48.8 5.9e-05
XP_011517167 (OMIM: 608360,613506) PREDICTED: volu ( 810) 216 48.8 5.9e-05
XP_006717249 (OMIM: 608360,613506) PREDICTED: volu ( 810) 216 48.8 5.9e-05
NP_062540 (OMIM: 608360,613506) volume-regulated a ( 810) 216 48.8 5.9e-05
NP_001120716 (OMIM: 608360,613506) volume-regulate ( 810) 216 48.8 5.9e-05
XP_005252153 (OMIM: 608360,613506) PREDICTED: volu ( 810) 216 48.8 5.9e-05
XP_016857384 (OMIM: 614453) PREDICTED: leucine-ric (1255) 217 49.1 7.2e-05
XP_016857383 (OMIM: 614453) PREDICTED: leucine-ric (1438) 217 49.2 7.9e-05
XP_016857382 (OMIM: 614453) PREDICTED: leucine-ric (1472) 217 49.2 8e-05
XP_016857381 (OMIM: 614453) PREDICTED: leucine-ric (1490) 217 49.2 8.1e-05
NP_001317564 (OMIM: 614453) leucine-rich repeat-co (1495) 217 49.2 8.1e-05
XP_016857379 (OMIM: 614453) PREDICTED: leucine-ric (1528) 217 49.2 8.3e-05
>>NP_689542 (OMIM: 609193) leucine-rich repeat protein 1 (414 aa)
initn: 2728 init1: 2728 opt: 2728 Z-score: 2519.1 bits: 475.1 E(85289): 1.4e-133
Smith-Waterman score: 2728; 100.0% identity (100.0% similar) in 414 aa overlap (1-414:1-414)
10 20 30 40 50 60
pF1KB7 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKAISSSLKGFLSAMRLAHRGCNVDTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKAISSSLKGFLSAMRLAHRGCNVDTPV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 STLTPVKTSEFENFKTKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 STLTPVKTSEFENFKTKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 KLDLSHNHIKKLPATIGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KLDLSHNHIKKLPATIGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LPVQFCQLQELKNLKLDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LPVQFCQLQELKNLKLDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LFGNTFEQPKVLPVIKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LFGNTFEQPKVLPVIKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCG
310 320 330 340 350 360
370 380 390 400 410
pF1KB7 RFCLNSFIQGTTTMNLHSVAHTVVLVDNLGGTEAPIISYFCSLGCYVNSSDMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RFCLNSFIQGTTTMNLHSVAHTVVLVDNLGGTEAPIISYFCSLGCYVNSSDMLK
370 380 390 400 410
>>NP_982292 (OMIM: 609193) leucine-rich repeat protein 1 (146 aa)
initn: 634 init1: 617 opt: 621 Z-score: 591.2 bits: 116.9 E(85289): 3.4e-26
Smith-Waterman score: 621; 87.6% identity (93.8% similar) in 113 aa overlap (1-112:1-113)
10 20 30 40 50 60
pF1KB7 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSK-AISSSLKGFLSAMRLAHRGCNVDTP
:::::::::::::::::::::::::::::::::: .: : ... : :...:
NP_982 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIWLSYHSIPSLPRFGYRKNLCLWK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VSTLTPVKTSEFENFKTKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSL
NP_982 ILSELFHSRNYYHESAFCCPHCGLSR
130 140
>>XP_016875972 (OMIM: 610368) PREDICTED: leucine-rich re (731 aa)
initn: 273 init1: 171 opt: 265 Z-score: 255.5 bits: 57.1 E(85289): 1.7e-07
Smith-Waterman score: 265; 36.8% identity (63.8% similar) in 163 aa overlap (166-327:109-266)
140 150 160 170 180 190
pF1KB7 TKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPAT
::.: :.. . ::. :.: :: :. .: .
XP_016 SARKLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEA
80 90 100 110 120 130
200 210 220 230 240 250
pF1KB7 IGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLK
: .: : :::. :.: .. . :: :. : :.::. .:: .. ::..: .:
XP_016 IVNLQMLTYLNLSRNQLSALPACLCG----LPLKVLIASNNKLGSLPEEIGQLKQLMELD
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB7 LDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLDLFGN-TFEQPKVLPV
.. ::. .: .:::: .:: :.. :: : ::.:. .::: .:. : .. : .
XP_016 VSCNEITALPQQIGQLKSLRELNVRRNYLKVLPQELVDLSLVKFDFSCNKVLVIPICFRE
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB7 IKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTM
.: : . :::..
XP_016 MK-QLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQH
260 270 280 290 300 310
>>NP_001157685 (OMIM: 610368) leucine-rich repeat and ca (696 aa)
initn: 291 init1: 165 opt: 259 Z-score: 250.3 bits: 56.0 E(85289): 3.4e-07
Smith-Waterman score: 259; 36.2% identity (63.2% similar) in 163 aa overlap (166-327:109-266)
140 150 160 170 180 190
pF1KB7 TKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPAT
::.: :.. . ::. :.: :: :. .: .
NP_001 SARKLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEA
80 90 100 110 120 130
200 210 220 230 240 250
pF1KB7 IGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLK
: .: : :::. :.: .. . :: :. : :.::. .:: .. ::..: .:
NP_001 IVNLQMLTYLNLSRNQLSALPACLCG----LPLKVLIASNNKLGSLPEEIGQLKQLMELD
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB7 LDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLDLFGN-TFEQPKVLPV
.. ::. .: .:::: .:: :.. :: : ::.:. .: : .:. : .. : .
NP_001 VSCNEITALPQQIGQLKSLRELNVRRNYLKVLPQELVDLPLVKFDFSCNKVLVIPICFRE
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB7 IKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTM
.: : . :::..
NP_001 MK-QLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQH
260 270 280 290 300 310
>>NP_055931 (OMIM: 610368) leucine-rich repeat and calpo (728 aa)
initn: 291 init1: 165 opt: 259 Z-score: 250.0 bits: 56.0 E(85289): 3.5e-07
Smith-Waterman score: 259; 36.2% identity (63.2% similar) in 163 aa overlap (166-327:109-266)
140 150 160 170 180 190
pF1KB7 TKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPAT
::.: :.. . ::. :.: :: :. .: .
NP_055 SARKLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEA
80 90 100 110 120 130
200 210 220 230 240 250
pF1KB7 IGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLK
: .: : :::. :.: .. . :: :. : :.::. .:: .. ::..: .:
NP_055 IVNLQMLTYLNLSRNQLSALPACLCG----LPLKVLIASNNKLGSLPEEIGQLKQLMELD
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB7 LDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLDLFGN-TFEQPKVLPV
.. ::. .: .:::: .:: :.. :: : ::.:. .: : .:. : .. : .
NP_055 VSCNEITALPQQIGQLKSLRELNVRRNYLKVLPQELVDLPLVKFDFSCNKVLVIPICFRE
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB7 IKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTM
.: : . :::..
NP_055 MK-QLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQH
260 270 280 290 300 310
>>NP_001157683 (OMIM: 610368) leucine-rich repeat and ca (763 aa)
initn: 291 init1: 165 opt: 259 Z-score: 249.7 bits: 56.1 E(85289): 3.6e-07
Smith-Waterman score: 259; 36.2% identity (63.2% similar) in 163 aa overlap (166-327:109-266)
140 150 160 170 180 190
pF1KB7 TKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPAT
::.: :.. . ::. :.: :: :. .: .
NP_001 SARKLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEA
80 90 100 110 120 130
200 210 220 230 240 250
pF1KB7 IGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLK
: .: : :::. :.: .. . :: :. : :.::. .:: .. ::..: .:
NP_001 IVNLQMLTYLNLSRNQLSALPACLCG----LPLKVLIASNNKLGSLPEEIGQLKQLMELD
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB7 LDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLDLFGN-TFEQPKVLPV
.. ::. .: .:::: .:: :.. :: : ::.:. .: : .:. : .. : .
NP_001 VSCNEITALPQQIGQLKSLRELNVRRNYLKVLPQELVDLPLVKFDFSCNKVLVIPICFRE
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB7 IKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTM
.: : . :::..
NP_001 MK-QLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQH
260 270 280 290 300 310
>>NP_036557 (OMIM: 179555) ras suppressor protein 1 isof (277 aa)
initn: 315 init1: 175 opt: 250 Z-score: 247.1 bits: 54.1 E(85289): 5e-07
Smith-Waterman score: 250; 27.4% identity (57.5% similar) in 252 aa overlap (96-342:1-250)
70 80 90 100 110 120
pF1KB7 IEQFFTKFVDEGKATVRLKEPPVDICLSKAISSSLKGFLSAMRLAHRGC--NVDTPVSTL
.:.::: .. : .. : .:..
NP_036 MSKSLKKLVEESREKNQPEVDMSDRGISNM
10 20 30
130 140 150 160 170 180
pF1KB7 TPVKTSEFENFKTKMVITSKKDYPLSKNFPY--SLEHLQTSYCGLVRVDMRMLCLKSLRK
:. . :..:.. .: . :. .:: :. . .. .. :..:..
NP_036 LDVNGLFTLSHITQLVLSHNKLTMVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKH
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 LDLSHNHIKKLPATIGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKAL
:.:. :... :: .:.: :. :.:. :.: :. : .::.: :: : .. :
NP_036 LNLGMNRLNTLPRGFGSLPALEVLDLTYNNLSENSLPGNFFYLT-TLRALYLSDNDFEIL
100 110 120 130 140
250 260 270 280 290 300
pF1KB7 PVQFCQLQELKNLKLDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLDL
: .. .: .:. :.: ::.::..: .::.: .:. : :.: :: :. ::.:
NP_036 PPDIGKLTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRLTVLPPELGNLDLTGQKQ
150 160 170 180 190 200
310 320 330 340 350 360
pF1KB7 FGNTFEQPKVLPVI-KLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCG
.. ..: : :. ..: .. . :. .. . :: :.
NP_036 VFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYL-YGRHMQANPEPPKKNNDKSKKIS
210 220 230 240 250 260
370 380 390 400 410
pF1KB7 RFCLNSFIQGTTTMNLHSVAHTVVLVDNLGGTEAPIISYFCSLGCYVNSSDMLK
NP_036 RKPLAAKNR
270
>>NP_689937 (OMIM: 179555) ras suppressor protein 1 isof (224 aa)
initn: 252 init1: 175 opt: 242 Z-score: 241.0 bits: 52.7 E(85289): 1.1e-06
Smith-Waterman score: 242; 32.1% identity (62.5% similar) in 168 aa overlap (176-342:32-197)
150 160 170 180 190 200
pF1KB7 YPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPATIGDLIHLQEL
:..:..:.:. :... :: .:.: :. :
NP_689 VPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVL
10 20 30 40 50 60
210 220 230 240 250 260
pF1KB7 NLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLKLDDNELIQFP
.:. :.: :. : .::.: :: : .. :: .. .: .:. :.: ::.::..:
NP_689 DLTYNNLSENSLPGNFFYLT-TLRALYLSDNDFEILPPDIGKLTKLQILSLRDNDLISLP
70 80 90 100 110 120
270 280 290 300 310 320
pF1KB7 CKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLDLFGNTFEQPKVLPVI-KLQAPLTLL
.::.: .:. : :.: :: :. ::.: .. ..: : :. ..: .. .
NP_689 KEIGELTQLKELHIQGNRLTVLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHV
130 140 150 160 170 180
330 340 350 360 370 380
pF1KB7 ESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTMNLHSVAHTVV
:. .. . :: :.
NP_689 FEYIRSETYKYL-YGRHMQANPEPPKKNNDKSKKISRKPLAAKNR
190 200 210 220
>>NP_060573 (OMIM: 612890) volume-regulated anion channe (858 aa)
initn: 247 init1: 150 opt: 250 Z-score: 240.8 bits: 54.6 E(85289): 1.1e-06
Smith-Waterman score: 250; 28.0% identity (58.8% similar) in 289 aa overlap (62-337:535-814)
40 50 60 70 80
pF1KB7 LCQQTSRSQPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVD--EGKATVRLKEPPVD
::.... . .::.: : : : : . .
NP_060 IPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLRCLHVKFTDVAEIPAWVYLLKNLRE
510 520 530 540 550 560
90 100 110 120 130 140
pF1KB7 ICLSKAISS---SLKGFLSAMRLAH-RGCNVDTPVSTLTPVKTSEFENFKTKMVITSKKD
. : ..: .. :. : .: : . .: . . : .: . .. ::.:: .
NP_060 LYLIGNLNSENNKMIGLESLRELRHLKILHVKSNL-TKVPSNITDVAPHLTKLVIHNDGT
570 580 590 600 610 620
150 160 170 180 190 200
pF1KB7 YPLSKNF---PYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPATIG--DLI
: : ... .:. . : : :. .. :..:..:::. :.:. . :. :
NP_060 KLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNLQELDLKSNNIRTIEEIISFQHLK
630 640 650 660 670 680
210 220 230 240 250 260
pF1KB7 HLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLKLDDNE
.: :.: :.. .. .. : :.:.:: .:.::...::: .::.:. : .. :.
NP_060 RLTCLKLWHNKIVTIPPSITHV---KNLESLYFSNNKLESLPVAVFSLQKLRCLDVSYNN
690 700 710 720 730 740
270 280 290 300 310
pF1KB7 LIQFPCKIGQLINLRFLSAARNKLPFLPSE-FRNLSLEYLDLFGNTFEQPKVLPV-IKLQ
. ..: .:: : ::. : . ::. .::.. :. ..:. :.: : . . :: .
NP_060 ISMIPIEIGLLQNLQHLHITGNKVDILPKQLFKCIKLRTLNLGQNCITS---LPEKVGQL
750 760 770 780 790
320 330 340 350 360 370
pF1KB7 APLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTMNLHS
. :: :: .. . .:.:
NP_060 SQLTQLELKGNCL--DRLPAQLGQCRMLKKSGLVVEDHLFDTLPLEVKEALNQDINIPFA
800 810 820 830 840 850
>>XP_016857090 (OMIM: 612890) PREDICTED: volume-regulate (858 aa)
initn: 247 init1: 150 opt: 250 Z-score: 240.8 bits: 54.6 E(85289): 1.1e-06
Smith-Waterman score: 250; 28.0% identity (58.8% similar) in 289 aa overlap (62-337:535-814)
40 50 60 70 80
pF1KB7 LCQQTSRSQPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVD--EGKATVRLKEPPVD
::.... . .::.: : : : : . .
XP_016 IPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLRCLHVKFTDVAEIPAWVYLLKNLRE
510 520 530 540 550 560
90 100 110 120 130 140
pF1KB7 ICLSKAISS---SLKGFLSAMRLAH-RGCNVDTPVSTLTPVKTSEFENFKTKMVITSKKD
. : ..: .. :. : .: : . .: . . : .: . .. ::.:: .
XP_016 LYLIGNLNSENNKMIGLESLRELRHLKILHVKSNL-TKVPSNITDVAPHLTKLVIHNDGT
570 580 590 600 610 620
150 160 170 180 190 200
pF1KB7 YPLSKNF---PYSLEHLQTSYCGLVRVDMRMLCLKSLRKLDLSHNHIKKLPATIG--DLI
: : ... .:. . : : :. .. :..:..:::. :.:. . :. :
XP_016 KLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNLQELDLKSNNIRTIEEIISFQHLK
630 640 650 660 670 680
210 220 230 240 250 260
pF1KB7 HLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKALPVQFCQLQELKNLKLDDNE
.: :.: :.. .. .. : :.:.:: .:.::...::: .::.:. : .. :.
XP_016 RLTCLKLWHNKIVTIPPSITHV---KNLESLYFSNNKLESLPVAVFSLQKLRCLDVSYNN
690 700 710 720 730 740
270 280 290 300 310
pF1KB7 LIQFPCKIGQLINLRFLSAARNKLPFLPSE-FRNLSLEYLDLFGNTFEQPKVLPV-IKLQ
. ..: .:: : ::. : . ::. .::.. :. ..:. :.: : . . :: .
XP_016 ISMIPIEIGLLQNLQHLHITGNKVDILPKQLFKCIKLRTLNLGQNCITS---LPEKVGQL
750 760 770 780 790
320 330 340 350 360 370
pF1KB7 APLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCGRFCLNSFIQGTTTMNLHS
. :: :: .. . .:.:
XP_016 SQLTQLELKGNCL--DRLPAQLGQCRMLKKSGLVVEDHLFDTLPLEVKEALNQDINIPFA
800 810 820 830 840 850
414 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:21:19 2016 done: Fri Nov 4 07:21:20 2016
Total Scan time: 8.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]