Result of FASTA (omim) for
pFN21AB7226
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7226, 453 aa
1>>>pF1KB7226 453 - 453 aa - 453 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8162+/-0.000443; mu= 15.0298+/- 0.028
mean_var=73.7985+/-14.640, 0's: 0 Z-trim(110.1): 43 B-trim: 214 in 1/53
Lambda= 0.149297
statistics sampled from 18334 (18357) to 18334 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.579), E-opt: 0.2 (0.215), width: 16
Scan time: 8.170
The best scores are: opt bits E(85289)
NP_777557 (OMIM: 614110) BPI fold-containing famil ( 453) 2902 634.9 1.4e-181
XP_016883152 (OMIM: 614110) PREDICTED: BPI fold-co ( 469) 2693 589.8 5e-168
NP_872325 (OMIM: 615718) BPI fold-containing famil ( 614) 742 169.7 2e-41
NP_872599 (OMIM: 615717) BPI fold-containing famil ( 476) 567 131.9 3.5e-30
NP_079503 (OMIM: 614108) BPI fold-containing famil ( 458) 409 97.9 6e-20
NP_001716 (OMIM: 109195) bactericidal permeability ( 487) 282 70.6 1.1e-11
NP_004130 (OMIM: 151990) lipopolysaccharide-bindin ( 481) 268 67.5 8.7e-11
>>NP_777557 (OMIM: 614110) BPI fold-containing family B (453 aa)
initn: 2902 init1: 2902 opt: 2902 Z-score: 3381.2 bits: 634.9 E(85289): 1.4e-181
Smith-Waterman score: 2902; 100.0% identity (100.0% similar) in 453 aa overlap (1-453:1-453)
10 20 30 40 50 60
pF1KB7 MLRILCLALCSLLTGTRADPGALLRLGMDIMNQVQSAMDESHILEKMAAEAGKKQPGMKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 MLRILCLALCSLLTGTRADPGALLRLGMDIMNQVQSAMDESHILEKMAAEAGKKQPGMKP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKGITNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMGGNMEIIVALNITATNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 IKGITNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMGGNMEIIVALNITATNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LLRDEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 LLRDEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 LVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSPVVQQQKGKTIKLADAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 LVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSPVVQQQKGKTIKLADAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 EALTFPEGYAKGSSQLLLPATFLSAELALLQKSFHVNIQDTMIGELPPQTTKTLARFIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 EALTFPEGYAKGSSQLLLPATFLSAELALLQKSFHVNIQDTMIGELPPQTTKTLARFIPE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 VAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAARWRSKAPMSLFLLEVHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 VAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAARWRSKAPMSLFLLEVHF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 NLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFITSYLEEAYIPVVNDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 NLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFITSYLEEAYIPVVNDVL
370 380 390 400 410 420
430 440 450
pF1KB7 QVGLPLPDFLAMNYNLAELDIVENALMLDLKLG
:::::::::::::::::::::::::::::::::
NP_777 QVGLPLPDFLAMNYNLAELDIVENALMLDLKLG
430 440 450
>>XP_016883152 (OMIM: 614110) PREDICTED: BPI fold-contai (469 aa)
initn: 2687 init1: 2687 opt: 2693 Z-score: 3137.7 bits: 589.8 E(85289): 5e-168
Smith-Waterman score: 2855; 96.4% identity (96.6% similar) in 469 aa overlap (1-453:1-469)
10 20 30 40
pF1KB7 MLRILCLALCSLLTGTRADPGALLRLGMDIMN----------------QVQSAMDESHIL
:::::::::::::::::::::::::::::::: .:::::::::::
XP_016 MLRILCLALCSLLTGTRADPGALLRLGMDIMNRGELVGPGVQLGGGAWEVQSAMDESHIL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 EKMAAEAGKKQPGMKPIKGITNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKMAAEAGKKQPGMKPIKGITNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 GNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDST
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 LHKVLPGLMCPAIDAVLVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKVLPGLMCPAIDAVLVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 VVQQQKGKTIKLADAGEALTFPEGYAKGSSQLLLPATFLSAELALLQKSFHVNIQDTMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVQQQKGKTIKLADAGEALTFPEGYAKGSSQLLLPATFLSAELALLQKSFHVNIQDTMIG
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB7 ELPPQTTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELPPQTTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAAR
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB7 WRSKAPMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WRSKAPMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFI
370 380 390 400 410 420
410 420 430 440 450
pF1KB7 TSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAELDIVENALMLDLKLG
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAELDIVENALMLDLKLG
430 440 450 460
>>NP_872325 (OMIM: 615718) BPI fold-containing family B (614 aa)
initn: 654 init1: 240 opt: 742 Z-score: 864.7 bits: 169.7 E(85289): 2e-41
Smith-Waterman score: 742; 31.8% identity (70.4% similar) in 399 aa overlap (58-448:218-612)
30 40 50 60 70 80
pF1KB7 MDIMNQVQSAMDESHILEKMAAEAGKKQPGMKPIKGITNLKVKDVQLPVITLNFVPGVGI
.. ..:::.:.. .. :: ... ..::::.
NP_872 GGLLGGGGLLGDGGLLGGGGVLGVLGEGGILSTVQGITGLRIVELTLPRVSVRLLPGVGV
190 200 210 220 230 240
90 100 110 120 130 140
pF1KB7 FQCVSTGMTVTGKSFMGGNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTN
. . : ....:::..: ..: : .:::: :: :. :: : . : :...: ..:..
NP_872 YLSLYTRVAINGKSLIGF-LDIAVEVNITAKVRLTMDR-TGYPRLVIERCDTLLGGIKVK
250 260 270 280 290 300
150 160 170 180 190 200
pF1KB7 LPSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAVLVYVNRKWTNLSDPMPVGQMGTVKYVL
: ..::..:..... .: ::: :.:: .:.:: :: . ... .:.: .:.:.:..
NP_872 LLRGLLPNLVDNLVNRVLADVLPDLLCPIVDVVLGLVNDQLGLVDSLIPLGILGSVQYTF
310 320 330 340 350 360
210 220 230 240 250 260
pF1KB7 MSAPATTASYIQLDFSPVVQQQKGKTIKLADAGEALT---FPEGYAKGS---SQLLLPAT
: : .:. ...::.. .: . : : . :.. .:: :. ::: . :.
NP_872 SSLPLVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSPKPMPELPPMGDNTKSQLAMSAN
370 380 390 400 410 420
270 280 290 300 310
pF1KB7 FLSAELALLQK--SFHVNIQDTMIGELPPQTTKTLARFIPEVAVAYPKSKPLTTQIKIKK
::.. :.:::: .. ..: . :. :::: :: ::. .::.: ::.: :: .:.. .
NP_872 FLGSVLTLLQKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCPLIIRIQVLN
430 440 450 460 470 480
320 330 340 350 360 370
pF1KB7 PPKVTMKTGKSLLHLHSTLEMFAARWRSKAPMSLFLLEVHFNLKVQYSVHENQLQMATSL
::.: .. :.:... .: :..... .. .. :..: .. ...:.. ..:.. ..:
NP_872 PPSVMLQKDKALVKVLATAEVMVSQPKD-LETTICLIDVDTEFLASFSTEGDKLMIDAKL
490 500 510 520 530 540
380 390 400 410 420 430
pF1KB7 DRLLSLSRKSSSIGNFNERELTGFITSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAEL
.. ::. ..:..:::. . .. . .. :..:..: :: :.::: .: .... :..
NP_872 EKT-SLNLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILNIDFSNADI
550 560 570 580 590 600
440 450
pF1KB7 DIVENALMLDLKLG
:..:. :.:
NP_872 DVLEDLLVLSA
610
>>NP_872599 (OMIM: 615717) BPI fold-containing family B (476 aa)
initn: 492 init1: 199 opt: 567 Z-score: 662.8 bits: 131.9 E(85289): 3.5e-30
Smith-Waterman score: 567; 27.8% identity (62.2% similar) in 392 aa overlap (61-448:89-472)
40 50 60 70 80 90
pF1KB7 MNQVQSAMDESHILEKMAAEAGKKQPGMKPIKGITNLKVKDVQLPVITLNFVPGVGIFQC
.. ...::.... :: . :...:: :.
NP_872 SVTAVNRGLLGSGGLLGGGGLLGHGGVFGVVEELSGLKIEELTLPKVLLKLLPGFGVQLS
60 70 80 90 100 110
100 110 120 130 140
pF1KB7 VST--GMTVTGKSFMGGNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTNL
. : :: .: .:: ... . .:.:. : . . : :.. . : ..: .. .:
NP_872 LHTKVGMHCSGP--LGGLLQLAAEVNVTSRVALAVSSR-GTPILILKRCSTLLGHI--SL
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB7 PSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAVLVYVNRKWTNLSDPMPVGQMGTVKYVLM
:..:: . ... : ::::::.::..:.:: ::. . . .: .:.:.. :
NP_872 FSGLLPTPLFGVVEQMLFKVLPGLLCPVVDSVLGVVNELLGAVLGLVSLGALGSVEFSLA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 SAPATTASYIQLDFSPVVQQQKGKTIKLADAGEALTFPEGYAKGSSQLLLPATFLSAELA
. : . .::.::..:.:.. : : . . : .::...: .... ..
NP_872 TLPLISNQYIELDINPIVKSVAGDIIDFPKSRAPAKVPPK-KDHTSQVMVPLYLFNTTFG
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB7 LLQKS--FHVNIQDTMIGELPPQTTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKVTMK
::: . . ..: .. : :: :: ..::. : . : ..... : ::..
NP_872 LLQTNGALDMDITPELVPSDVPLTTTDLAALLPEALGKLPLHQQLLLFLRVREAPTVTLH
300 310 320 330 340 350
330 340 350 360 370 380
pF1KB7 TGKSLLHLHSTLEMFAARWRSKAPMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLLSLS
. :.:. : ...... .. .: ::: :. .....: . ..:... ::.:: :..
NP_872 NKKALVSLPANIHVLFYVPKG-TPESLFELNSVMTVRAQLAPSATKLHISLSLERL-SVK
360 370 380 390 400 410
390 400 410 420 430 440
pF1KB7 RKSSSIGNFNERELTGFITSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAELDIVENAL
:: :. .: ... . .: : .: .:.::.::: : .:.. . :.:::::.
NP_872 VASSFTHAFDGSRLEEWLSHVVGAVYAPKLNVALDVGIPLPKVLNINFSNSVLEIVENAV
420 430 440 450 460 470
450
pF1KB7 MLDLKLG
.:
NP_872 VLTVAS
>>NP_079503 (OMIM: 614108) BPI fold-containing family B (458 aa)
initn: 308 init1: 135 opt: 409 Z-score: 479.1 bits: 97.9 E(85289): 6e-20
Smith-Waterman score: 409; 23.9% identity (60.3% similar) in 451 aa overlap (5-448:9-450)
10 20 30 40 50
pF1KB7 MLRILCLALCSLLTGTRADPGALLRLGMDIMNQVQSAMDESHILEKMAAEAGKKQP
: ::: ..:. . ::...::. .. : : . .. . . . . . .
NP_079 MAWASRLGLLLALLLPVVGA-STPGTVVRLNKAALSYV-SEIGKAPLQRALQVTVPHFLD
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 GMKPIKGITNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMGGN-MEIIVALNI
: ... .:..: . :.:. : :. .....: : : . . .:. . ...
NP_079 WSGEALQPTRIRILNVHVPRLHLKFIAGFGVRLLAAANFTF--KVFRAPEPLELTLPVEL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 TATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDSTLHKVLPGLMCP
: .:. .. :: . .: .. ... :: . . .... .. :: . .:
NP_079 LADTRVTQSS-IRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 AIDAVLVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSPVVQQQKGKTIK
.:. .. :: . .: ::: . ..: ..:.:..:..::.:. . :. :: :
NP_079 SISNLVQGVNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLL-GKPII
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 LADAGEALTFPEGYA-KGSSQLL-LPATFLSAELALLQKSFHVNIQDTMIGELPPQ----
: . ...:. . .:: . : .... : ::::. .:.. : :.: .
NP_079 LPTDATPFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDIT--GQLRSDDNLL
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 TTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAARWRSKA
.:..:.:.::::: .:. :.. .... : . ..:... :.:. .:..:. ..:
NP_079 NTSALGRLIPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATA-SNSA
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB7 PMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFITSYLE
.::: :.: ::..: :: . .:: .::. ..:. ::..: .. .. .. . .:
NP_079 FQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFE
360 370 380 390 400 410
410 420 430 440 450
pF1KB7 EAYIPVVNDVLQVGLPLPDFLAMNYNLAELDIVENALMLDLKLG
. . .: .: .:. :: . ..: :. . :. ...
NP_079 KPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFYQS
420 430 440 450
>>NP_001716 (OMIM: 109195) bactericidal permeability-inc (487 aa)
initn: 200 init1: 83 opt: 282 Z-score: 330.8 bits: 70.6 E(85289): 1.1e-11
Smith-Waterman score: 345; 23.3% identity (58.5% similar) in 446 aa overlap (7-427:19-459)
10 20 30 40
pF1KB7 MLRILCLALCSLLTGTRA--DPGALLRL---GMDIMNQVQSAMDESHI
..: .. :.. : .::...:. :.: .: .: ...
NP_001 MRENMARGPCNAPRWASLMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKE-
10 20 30 40 50
50 60 70 80 90
pF1KB7 LEKMAAEAGKKQPGMKPI-KG---ITNLKVKDVQLPVITLNFVPGVGI-FQCVSTGMTVT
:... . . .: . :: . .. ... ::: ...::.::. :. .... ..
NP_001 LKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKIS
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB7 GK-----SF--MGGNMEI-IVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPS
:: : :.::... : ...:.: .: . .: :.. .: . .:.... .
NP_001 GKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISK
120 130 140 150 160 170
160 170 180 190 200
pF1KB7 N---MLPKMVNKFLDSTLHKVLPGLMCPAI-DAVLVYVNRKWTNLSDPMPVGQMGTVKYV
. : .. .: ..:.:.. . . .: . ..: .. . .: . ... ..:
NP_001 SKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYG
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 LMSAPATTASYIQLDFSPVVQQQKGKTIKLADAGEALTFPEGYAKGSSQLLLPATFLSAE
:.. ::::: ...... ... .. : .. :: .. . : : .:
NP_001 LVAPPATTAETLDVQMKGEFYSENHHNPP-PFAPPVMEFPAAHDRMVYLGLSDYFFNTAG
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB7 LALLQKS-FHVNIQDTMIGELPP--QTTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKV
:. . . ......: :: . ::: .. :.:::: .:. : . ... . ::..
NP_001 LVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMK-IQIHVSASTPPHL
300 310 320 330 340 350
330 340 350 360 370 380
pF1KB7 TMKTGKSLLHLHSTLEMFAARWRSKAPMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLL
... .. .. ::. :. ::::. .: . ... :.. :.: .:::::
NP_001 SVQPTGLTFYPAVDVQAFAVLPNSSLA-SLFLIGMHTTGSMEVSAESNRLVGELKLDRLL
360 370 380 390 400 410
390 400 410 420 430 440
pF1KB7 SLSRKSSSIGNFNERELTGFITSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAELDIVE
: : :.:: : . : ... . .: ::. :: :.:::
NP_001 -LELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQ
420 430 440 450 460 470
450
pF1KB7 NALMLDLKLG
NP_001 NFLLFGADVVYK
480
>>NP_004130 (OMIM: 151990) lipopolysaccharide-binding pr (481 aa)
initn: 138 init1: 97 opt: 268 Z-score: 314.6 bits: 67.5 E(85289): 8.7e-11
Smith-Waterman score: 292; 22.7% identity (55.7% similar) in 449 aa overlap (4-427:12-451)
10 20 30 40
pF1KB7 MLRILCLALCSLLTGTRADPGALLRL---GMDIMNQVQSAMDESHILE-KMA
.: : : : . :.:: . :. :.. : .:..:. .
NP_004 MGALARALPSILLALLLTSTPEALGANPGLVARITDKGLQYAAQEGLLALQSELLRITLP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 AEAGK-KQPGM-KPIKGITNLKVKDVQLPVITLNFVPGVGIFQCVS-TGMTVTG-----K
.: . : . . . .:.... .: .: ::: :. .: ... : : :
NP_004 DFTGDLRIPHVGRGRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQGRWKVRK
70 80 90 100 110 120
110 120 130 140 150
pF1KB7 SF--MGGNMEIIVALNITATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPSNM--LPKM
:: . :.... : ..: :: .: .: :. . .: ...:.... ... : ..
NP_004 SFFKLQGSFDVSVKGISISVNLLLGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 VNKFLDSTLHKVLPGLMCPAID-AVLVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTA
.. ..: ..::: . .: :. .: .. .: . ... . : :. :: .::
NP_004 FHNQIESKFQKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATA
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 SYIQLDFSPVVQQQKGKT-IKLADAGEALTFPEGYAKGSSQLLLPATFLSAELALLQKSF
..... :. . ... .. . : : ....:: . : . .: .: :. ....
NP_004 QMLEVMFKGEIFHRNHRSPVTLLAA--VMSLPEEHNKMVYFAISDYVFNTASLVYHEEGY
250 260 270 280 290
280 290 300 310 320
pF1KB7 -HVNIQDTMIGELPPQ-----TTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKVTMKTG
. .: : :: ::. :::.. :.:..: ::. . : : .. . : .... :
NP_004 LNFSITDDMI---PPDSNIRLTTKSFRPFVPRLARLYPNMN-LELQGSVPSAPLLNFSPG
300 310 320 330 340 350
330 340 350 360 370 380
pF1KB7 KSLLHLHSTLEMFAARWRS-KAPMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLLSLSR
. . . .. :. : : :. : : : :... . . ... . .. ..
NP_004 NLSVDPYMEIDAFVLLPSSSKEPV--FRLSVATNVSATLTFNTSKITGFLKPGKV-KVEL
360 370 380 390 400 410
390 400 410 420 430 440
pF1KB7 KSSSIGNFNERELTGFITSYLEEAYIPVVNDVLQVGLPLPDFLAMNYNLAELDIVENALM
: :..: :: . : .... :. ... : :: : :.:::
NP_004 KESKVGLFNAELLEALLNYYILNTFYPKFNDKLAEGFPLPLLKRVQLYDLGLQIHKDFLF
420 430 440 450 460 470
450
pF1KB7 LDLKLG
NP_004 LGANVQYMRV
480
453 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:06:46 2016 done: Fri Nov 4 06:06:48 2016
Total Scan time: 8.170 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]