Result of FASTA (omim) for
pFN21AB5636
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5636, 331 aa
1>>>pF1KB5636 331 - 331 aa - 331 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9356+/-0.000329; mu= 1.9883+/- 0.021
mean_var=253.4558+/-51.190, 0's: 0 Z-trim(124.0): 45 B-trim: 0 in 0/57
Lambda= 0.080561
statistics sampled from 44877 (44927) to 44877 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.527), width: 16
Scan time: 9.960
The best scores are: opt bits E(85289)
NP_001277333 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
NP_001277332 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
XP_016857678 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857677 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
NP_001274276 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
NP_001277334 (OMIM: 187040,613065) T-cell acute ly ( 331) 2243 272.9 6.4e-73
NP_003180 (OMIM: 187040,613065) T-cell acute lymph ( 331) 2243 272.9 6.4e-73
XP_016857680 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857679 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_005271217 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857676 (OMIM: 187040,613065) PREDICTED: T-ce ( 331) 2243 272.9 6.4e-73
XP_016857682 (OMIM: 187040,613065) PREDICTED: T-ce ( 172) 1169 147.8 1.5e-35
NP_001277335 (OMIM: 187040,613065) T-cell acute ly ( 172) 1169 147.8 1.5e-35
XP_016882306 (OMIM: 151440) PREDICTED: protein lyl ( 302) 488 68.9 1.5e-11
NP_005574 (OMIM: 151440) protein lyl-1 [Homo sapie ( 280) 485 68.5 1.8e-11
XP_016882305 (OMIM: 151440) PREDICTED: protein lyl ( 351) 485 68.6 2.2e-11
XP_005259969 (OMIM: 151440) PREDICTED: protein lyl ( 206) 475 67.3 3.3e-11
NP_005412 (OMIM: 186855,613065) T-cell acute lymph ( 108) 346 52.0 6.8e-07
>>NP_001277333 (OMIM: 187040,613065) T-cell acute lympho (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>NP_001277332 (OMIM: 187040,613065) T-cell acute lympho (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>XP_016857678 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>XP_016857677 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>NP_001274276 (OMIM: 187040,613065) T-cell acute lympho (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>NP_001277334 (OMIM: 187040,613065) T-cell acute lympho (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
NP_001 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>NP_003180 (OMIM: 187040,613065) T-cell acute lymphocyt (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
NP_003 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>XP_016857680 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>XP_016857679 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
XP_016 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
>>XP_005271217 (OMIM: 187040,613065) PREDICTED: T-cell a (331 aa)
initn: 2243 init1: 2243 opt: 2243 Z-score: 1430.1 bits: 272.9 E(85289): 6.4e-73
Smith-Waterman score: 2243; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB5 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
250 260 270 280 290 300
310 320 330
pF1KB5 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
:::::::::::::::::::::::::::::::
XP_005 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
310 320 330
331 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:59:48 2016 done: Fri Nov 4 03:59:50 2016
Total Scan time: 9.960 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]