Result of FASTA (omim) for
pFN21AB4637
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4637, 300 aa
1>>>pF1KB4637 300 - 300 aa - 300 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9477+/-0.000302; mu= 8.9382+/- 0.019
mean_var=122.5787+/-24.237, 0's: 0 Z-trim(121.2): 20 B-trim: 0 in 0/51
Lambda= 0.115842
statistics sampled from 37369 (37400) to 37369 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.439), width: 16
Scan time: 7.540
The best scores are: opt bits E(85289)
NP_001271446 (OMIM: 612910) PHD finger protein 23 ( 336) 434 82.9 9.3e-16
NP_001271447 (OMIM: 612910) PHD finger protein 23 ( 399) 434 83.0 1.1e-15
NP_077273 (OMIM: 612910) PHD finger protein 23 iso ( 403) 434 83.0 1.1e-15
XP_011527145 (OMIM: 610335) PREDICTED: PHD finger ( 609) 205 44.8 0.0005
XP_016883360 (OMIM: 610335) PREDICTED: PHD finger ( 609) 205 44.8 0.0005
XP_005260478 (OMIM: 610335) PREDICTED: PHD finger ( 609) 205 44.8 0.0005
XP_011527146 (OMIM: 610335) PREDICTED: PHD finger ( 609) 205 44.8 0.0005
XP_016883358 (OMIM: 610335) PREDICTED: PHD finger ( 896) 205 44.9 0.00068
XP_016883359 (OMIM: 610335) PREDICTED: PHD finger ( 896) 205 44.9 0.00068
XP_016883357 (OMIM: 610335) PREDICTED: PHD finger ( 957) 205 45.0 0.00072
NP_057520 (OMIM: 610335) PHD finger protein 20 [Ho (1012) 205 45.0 0.00075
XP_016883356 (OMIM: 610335) PREDICTED: PHD finger (1012) 205 45.0 0.00075
XP_016883353 (OMIM: 610335) PREDICTED: PHD finger (1012) 205 45.0 0.00075
XP_016883354 (OMIM: 610335) PREDICTED: PHD finger (1012) 205 45.0 0.00075
XP_016883355 (OMIM: 610335) PREDICTED: PHD finger (1012) 205 45.0 0.00075
>>NP_001271446 (OMIM: 612910) PHD finger protein 23 isof (336 aa)
initn: 585 init1: 395 opt: 434 Z-score: 403.8 bits: 82.9 E(85289): 9.3e-16
Smith-Waterman score: 569; 36.8% identity (56.1% similar) in 321 aa overlap (10-286:17-326)
10 20 30 40 50
pF1KB4 MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRS
..:: : :::::.:::::::.:::::::::: :..: : .
NP_001 MLEAMAEPSPEDPPPTLKPETQPPE-KRRRTIEDFNKFCSFVLAYAGYIP-PSKEAPDSA
10 20 30 40 50
60 70 80 90
pF1KB4 SPSPANSTAGTI-DSDGWDAG--FSDI---------ASSVPLPVSDRCFSH---------
. . .. : :: .. .: :. .:.:.:. .::
NP_001 TLLEKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKN
60 70 80 90 100 110
100 110 120 130
pF1KB4 --LQPT------LLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSD------APGKEGYRGG
: : .:.: .:. : .: ...::.:::: . .. :: .
NP_001 RKLGPGAGAGFGVLRRPRPTP--GDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPQAPPS
120 130 140 150 160 170
140 150 160 170 180 190
pF1KB4 LLKLEAADPYVETPTSPTLQDI--PQAPSDPCSGWDSDTPSSGSCATVSPDQVKEIKTEG
: . : . . .:: : ..: ::: :. : .:.
NP_001 DTDSEEEEEEEEEEEEEEMATVVGGEAPV-PVLPTPPEAPRPP--ATVHPEGVPPADSES
180 190 200 210 220 230
200 210 220 230 240
pF1KB4 KRTIVRQGKQVVFRDEDSTGN-------DEDIMVDSDDDSWDLVTCFCMKPFAGRPMIEC
:.. :. . .: :.... ::::::.: ::::::.::.: :::::::::::
NP_001 KEV----GSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIEC
240 250 260 270 280
250 260 270 280 290 300
pF1KB4 NECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTGSRKLFLD
. : ::::::::::.:.:::. : ::::.. . . ::
NP_001 SLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP
290 300 310 320 330
>>NP_001271447 (OMIM: 612910) PHD finger protein 23 isof (399 aa)
initn: 667 init1: 395 opt: 434 Z-score: 402.8 bits: 83.0 E(85289): 1.1e-15
Smith-Waterman score: 435; 33.7% identity (53.9% similar) in 258 aa overlap (39-286:158-389)
10 20 30 40 50 60
pF1KB4 AFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRSSPSPANSTAGTIDSD
:. : : . : : . . .
NP_001 KLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKL-GP
130 140 150 160 170 180
70 80 90 100 110 120
pF1KB4 GWDAGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSD
: :::. . : : . . :... . .. : . .. :.: . ::
NP_001 GAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKA------ERGDRLPPPGPPQAPPSD
190 200 210 220 230 240
130 140 150 160 170 180
pF1KB4 APGKEGYRGGLLKLEAADPYV---ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCATVS
. ..: . . : : :.:. :.: :.:: : :::
NP_001 TDSEEEEEEEEEEEEEEMATVVGGEAPV-PVLPTPPEAPRPP--------------ATVH
250 260 270 280
190 200 210 220 230
pF1KB4 PDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGN-------DEDIMVDSDDDSWDLVTCFCM
:. : .:.:.. :. . .: :.... ::::::.: ::::::.::.:
NP_001 PEGVPPADSESKEV----GSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCR
290 300 310 320 330 340
240 250 260 270 280 290
pF1KB4 KPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTGSRKLF
:::::::::::. : ::::::::::.:.:::. : ::::.. . . ::
NP_001 KPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP
350 360 370 380 390
300
pF1KB4 LD
>--
initn: 287 init1: 185 opt: 257 Z-score: 242.9 bits: 53.4 E(85289): 8.6e-07
Smith-Waterman score: 257; 38.6% identity (56.2% similar) in 153 aa overlap (10-156:13-148)
10 20 30 40 50
pF1KB4 MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEE--LPLRSSP
..:: : :::::.:::::::.:::::::::: ::: : .:
NP_001 MPGDCRRDPPPTLKPETQPPE-KRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSS
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 SPANSTAGTIDSDGWDAGFSDIASSVPL----PVSDRCFSHLQPTLLQRAKPSNFLLDRK
:: . ... ::::::.. ::. . . : : .. :: : . : . . .
NP_001 SPLRGESAA-DSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPT--QPGPPRSTFSRLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 KTDKLKKKKKRKRRDSDAPGKEGYRGGLLKLEAADPYVETPTSPTLQDIPQAPSDPCSGW
:. .: : .:: :. :.. : : .: :::
NP_001 APDSATLLEKMKLKDS-----------LFDLDG--PKVASPLSPTSLTHTSRPPAALTPV
120 130 140 150 160
180 190 200 210 220 230
pF1KB4 DSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSDDDSWD
NP_001 PLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKAE
170 180 190 200 210 220
>>NP_077273 (OMIM: 612910) PHD finger protein 23 isoform (403 aa)
initn: 641 init1: 395 opt: 434 Z-score: 402.7 bits: 83.0 E(85289): 1.1e-15
Smith-Waterman score: 435; 33.7% identity (53.9% similar) in 258 aa overlap (39-286:162-393)
10 20 30 40 50 60
pF1KB4 AFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRSSPSPANSTAGTIDSD
:. : : . : : . . .
NP_077 KLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKL-GP
140 150 160 170 180 190
70 80 90 100 110 120
pF1KB4 GWDAGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSD
: :::. . : : . . :... . .. : . .. :.: . ::
NP_077 GAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKA------ERGDRLPPPGPPQAPPSD
200 210 220 230 240
130 140 150 160 170 180
pF1KB4 APGKEGYRGGLLKLEAADPYV---ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCATVS
. ..: . . : : :.:. :.: :.:: : :::
NP_077 TDSEEEEEEEEEEEEEEMATVVGGEAPV-PVLPTPPEAPRPP--------------ATVH
250 260 270 280
190 200 210 220 230
pF1KB4 PDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGN-------DEDIMVDSDDDSWDLVTCFCM
:. : .:.:.. :. . .: :.... ::::::.: ::::::.::.:
NP_077 PEGVPPADSESKEV----GSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCR
290 300 310 320 330 340
240 250 260 270 280 290
pF1KB4 KPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTGSRKLF
:::::::::::. : ::::::::::.:.:::. : ::::.. . . ::
NP_077 KPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP
350 360 370 380 390 400
300
pF1KB4 LD
>--
initn: 275 init1: 185 opt: 257 Z-score: 242.8 bits: 53.4 E(85289): 8.7e-07
Smith-Waterman score: 257; 38.6% identity (56.2% similar) in 153 aa overlap (10-156:17-152)
10 20 30 40 50
pF1KB4 MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEE--LPL
..:: : :::::.:::::::.:::::::::: ::: :
NP_077 MLEAMAEPSPEDPPPTLKPETQPPE-KRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPA
10 20 30 40 50
60 70 80 90 100
pF1KB4 RSSPSPANSTAGTIDSDGWDAGFSDIASSVPL----PVSDRCFSHLQPTLLQRAKPSNFL
.: :: . ... ::::::.. ::. . . : : .. :: : . : . .
NP_077 SGSSSPLRGESAA-DSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPT--QPGPPRSTF
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB4 LDRKKTDKLKKKKKRKRRDSDAPGKEGYRGGLLKLEAADPYVETPTSPTLQDIPQAPSDP
. :. .: : .:: :. :.. : : .: :::
NP_077 SRLQAPDSATLLEKMKLKDS-----------LFDLDG--PKVASPLSPTSLTHTSRPPAA
120 130 140 150 160
170 180 190 200 210 220
pF1KB4 CSGWDSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSDD
NP_077 LTPVPLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKL
170 180 190 200 210 220
>>XP_011527145 (OMIM: 610335) PREDICTED: PHD finger prot (609 aa)
initn: 193 init1: 131 opt: 205 Z-score: 193.3 bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_011 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
80 90 100 110 120 130
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_011 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
140 150 160 170 180 190
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_011 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_011 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
260 270 280 290 300 310
300
pF1KB4 SRKLFLD
XP_011 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
320 330 340 350 360 370
>>XP_016883360 (OMIM: 610335) PREDICTED: PHD finger prot (609 aa)
initn: 193 init1: 131 opt: 205 Z-score: 193.3 bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
80 90 100 110 120 130
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
140 150 160 170 180 190
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
260 270 280 290 300 310
300
pF1KB4 SRKLFLD
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
320 330 340 350 360 370
>>XP_005260478 (OMIM: 610335) PREDICTED: PHD finger prot (609 aa)
initn: 193 init1: 131 opt: 205 Z-score: 193.3 bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_005 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
80 90 100 110 120 130
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_005 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
140 150 160 170 180 190
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_005 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_005 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
260 270 280 290 300 310
300
pF1KB4 SRKLFLD
XP_005 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
320 330 340 350 360 370
>>XP_011527146 (OMIM: 610335) PREDICTED: PHD finger prot (609 aa)
initn: 193 init1: 131 opt: 205 Z-score: 193.3 bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_011 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
80 90 100 110 120 130
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_011 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
140 150 160 170 180 190
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_011 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_011 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
260 270 280 290 300 310
300
pF1KB4 SRKLFLD
XP_011 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
320 330 340 350 360 370
>>XP_016883358 (OMIM: 610335) PREDICTED: PHD finger prot (896 aa)
initn: 170 init1: 131 opt: 205 Z-score: 190.9 bits: 44.9 E(85289): 0.00068
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:388-583)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
360 370 380 390 400 410
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
420 430 440 450 460 470
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
480 490 500 510 520 530
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
540 550 560 570 580 590
300
pF1KB4 SRKLFLD
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
600 610 620 630 640 650
>>XP_016883359 (OMIM: 610335) PREDICTED: PHD finger prot (896 aa)
initn: 170 init1: 131 opt: 205 Z-score: 190.9 bits: 44.9 E(85289): 0.00068
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:388-583)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
360 370 380 390 400 410
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
420 430 440 450 460 470
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
480 490 500 510 520 530
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
540 550 560 570 580 590
300
pF1KB4 SRKLFLD
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
600 610 620 630 640 650
>>XP_016883357 (OMIM: 610335) PREDICTED: PHD finger prot (957 aa)
initn: 170 init1: 131 opt: 205 Z-score: 190.4 bits: 45.0 E(85289): 0.00072
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:449-644)
80 90 100 110 120 130
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
:::. : ::... . : :.....
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
420 430 440 450 460 470
140 150 160 170 180
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
:: : : . . : : : ..: : :: : . . :: . .. .::.
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
480 490 500 510 520 530
190 200 210 220 230
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
. ..:. . .. ..... . ..: :.: :. .. : :: .:. :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
540 550 560 570 580 590
240 250 260 270 280 290
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
:.: . ::.:.::. : : : . . :::: ..: :.:
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
600 610 620 630 640 650
300
pF1KB4 SRKLFLD
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
660 670 680 690 700 710
300 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:07:18 2016 done: Fri Nov 4 03:07:19 2016
Total Scan time: 7.540 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]