(Circular) (Six-base) MAPSORT of: pFN21AA0138.seq Check: 4290 from: 1 to: 7564 pFN21AA0138 7564 bp With 182 enzymes: SgfI * February 27, 2009 14:36 .. AatII G_ACGT'C Cuts at: 278 331 414 600 1536 5374 278 Size: 53 83 186 936 3838 2468 Fragments arranged by size: 3838 2468 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 3371 3528 4907 1937 Size: 1434 157 1379 4594 Fragments arranged by size: 4594 1434 1379 157 Acc65I G'GTAC_C Cuts at: 4885 4885 Size: 7564 AclI AA'CG_TT Cuts at: 1563 5691 6064 1563 Size: 4128 373 3063 Fragments arranged by size: 4128 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2150 2303 2436 3636 5627 7011 7279 1632 Size: 518 153 133 1200 1991 1384 268 1917 Fragments arranged by size: 1991 1917 1384 1200 518 268 153 133 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 7367 AflIII A'CryG_T Cuts at: 1203 6463 7440 1203 Size: 5260 977 1327 Fragments arranged by size: 5260 1327 977 AgeI A'CCGG_T Cuts at: 6395 6395 Size: 7564 AhdI GACnn_n'nnGTC Cuts at: 3838 6293 3838 Size: 2455 5109 AleI CACnn'nnGTG Cuts at: 1166 1166 Size: 7564 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 2739 2982 1184 Size: 1555 243 5766 Fragments arranged by size: 5766 1555 243 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 3885 3917 3885 Size: 32 7532 AlwNI CAG_nnn'CTG Cuts at: 4033 5307 6879 4033 Size: 1274 1572 4718 Fragments arranged by size: 4718 1572 1274 ApaI G_GGCC'C Cuts at: 2042 4668 2042 Size: 2626 4938 ApaLI G'TGCA_C Cuts at: 5621 6777 5621 Size: 1156 6408 ApoI r'AATT_y Cuts at: 1493 4873 5099 5251 7360 1493 Size: 3380 226 152 2109 1697 Fragments arranged by size: 3380 2109 1697 226 152 AseI AT'TA_AT Cuts at: 160 1032 6118 160 Size: 872 5086 1606 Fragments arranged by size: 5086 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 7564 AvaI C'yCGr_G Cuts at: 1870 1943 2021 2035 2062 3337 3956 4013 4184 Size: 73 78 14 27 1275 619 57 171 Cuts at: 4184 4669 4889 1870 Size: 485 220 4545 Fragments arranged by size: 4545 1275 619 485 220 171 78 73 57 27 14 BamHI G'GATC_C Cuts at: 4894 5261 4894 Size: 367 7197 BanI G'GyrC_C Cuts at: 618 943 1160 1787 4143 4595 4753 4885 6340 Size: 325 217 627 2356 452 158 132 1455 Cuts at: 6340 618 Size: 1842 Fragments arranged by size: 2356 1842 1455 627 452 325 217 158 132 BanII G_rGCy'C Cuts at: 1391 2042 2892 2982 3006 3152 3346 3747 4668 Size: 651 850 90 24 146 194 401 921 Cuts at: 4668 4883 1391 Size: 215 4072 Fragments arranged by size: 4072 921 850 651 401 215 194 146 90 24 BbeI G_GCGC'C Cuts at: 4147 4147 Size: 7564 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2328 3063 3624 928 Size: 971 429 735 561 4868 Fragments arranged by size: 4868 971 735 561 429 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 5755 5789 1903 Size: 34 3818 34 3678 Fragments arranged by size: 3818 3678 34 34 BciVI GTATCCnnnnn_n' Cuts at: 5456 6666 5456 Size: 1210 6354 BclI T'GATC_A Cuts at: 1548 3136 1548 Size: 1588 5976 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 2938 4672 6175 Size: 107 122 71 631 605 1266 1734 1503 Cuts at: 6175 136 Size: 1525 Fragments arranged by size: 1734 1525 1503 1266 631 605 122 107 71 BglII A'GATC_T Cuts at: 7559 7559 Size: 7564 BlpI GC'TnA_GC Cuts at: 2093 2529 4981 2093 Size: 436 2452 4676 Fragments arranged by size: 4676 2452 436 Bme1580I G_kGCm'C Cuts at: 1790 2042 4668 4683 5625 6781 1790 Size: 252 2626 15 942 1156 2573 Fragments arranged by size: 2626 2573 1156 942 252 15 BmgBI CAC'GTC Cuts at: 1318 1318 Size: 7564 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 2088 4552 5295 Size: 416 53 83 399 24 671 2464 743 Cuts at: 5295 6253 442 Size: 958 1753 Fragments arranged by size: 2464 1753 958 743 671 416 399 83 53 24 BmtI G_CTAG'C Cuts at: 1056 4620 1056 Size: 3564 4000 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 3805 3805 Size: 7564 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2384 2421 2732 4055 4085 6224 1239 Size: 1145 37 311 1323 30 2139 2579 Fragments arranged by size: 2579 2139 1323 1145 311 37 30 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 2168 3257 5689 6554 6852 2168 Size: 1089 2432 865 298 2880 Fragments arranged by size: 2880 2432 1089 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 4311 4374 6227 882 Size: 617 2812 63 1853 2219 Fragments arranged by size: 2812 2219 1853 617 63 BsaAI yAC'GTr Cuts at: 493 1204 2500 4750 5355 493 Size: 711 1296 2250 605 2702 Fragments arranged by size: 2702 2250 1296 711 605 BsaBI GATnn'nnATC Cuts at: 7558 7558 Size: 7564 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 4144 5371 5753 6388 Size: 53 83 186 936 2611 1227 382 635 Cuts at: 6388 275 Size: 1451 Fragments arranged by size: 2611 1451 1227 936 635 382 186 83 53 BsaWI w'CCGG_w Cuts at: 2608 2797 5997 6395 6669 6816 7227 2608 Size: 189 3200 398 274 147 411 2945 Fragments arranged by size: 3200 2945 411 398 274 189 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 3732 3762 1178 Size: 30 165 30 2329 30 4980 Fragments arranged by size: 4980 2329 165 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 2306 3014 4148 4583 1186 Size: 1120 708 1134 435 4167 Fragments arranged by size: 4167 1134 1120 708 435 BseYI C'CCAG_C Cuts at: 3467 4467 6767 7263 3467 Size: 1000 2300 496 3768 Fragments arranged by size: 3768 2300 1000 496 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 2490 4290 1163 Size: 573 754 1800 4437 Fragments arranged by size: 4437 1800 754 573 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 3720 4450 5014 5775 6803 1540 Size: 275 186 1719 730 564 761 1028 2301 Fragments arranged by size: 2301 1719 1028 761 730 564 275 186 BsiHKAI G_wGCw'C Cuts at: 2437 2982 3006 3152 4554 4575 4629 5625 5710 Size: 545 24 146 1402 21 54 996 85 Cuts at: 5710 6781 2437 Size: 1071 3220 Fragments arranged by size: 3220 1402 1071 996 545 146 85 54 24 21 BsmI GAATG_Cn' Cuts at: 5075 5168 5075 Size: 93 7471 BsmBI CGTCTCn'nnnn_ Cuts at: 2328 2328 Size: 7564 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2042 2437 2892 2982 3006 3152 3346 Size: 399 252 395 455 90 24 146 194 Cuts at: 3346 3747 4554 4575 4629 4668 4683 4883 5625 Size: 401 807 21 54 39 15 200 742 Cuts at: 5625 5710 6781 1391 Size: 85 1071 2174 Fragments arranged by size: 2174 1071 807 742 455 401 399 395 252 200 194 146 90 85 54 39 24 21 15 BspEI T'CCGG_A Cuts at: 2608 2797 7227 2608 Size: 189 4430 2945 Fragments arranged by size: 4430 2945 189 BspHI T'CATG_A Cuts at: 5453 7183 5453 Size: 1730 5834 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2379 3762 4919 844 Size: 1535 1383 1157 3489 Fragments arranged by size: 3489 1535 1383 1157 BsrBI CCG'CTC Cuts at: 1394 1823 2179 3712 3943 3973 4039 4054 4060 Size: 429 356 1533 231 30 66 15 6 Cuts at: 4060 4177 5451 1394 Size: 117 1274 3507 Fragments arranged by size: 3507 1533 1274 429 356 231 117 66 30 15 6 BsrDI GCAATG_nn' Cuts at: 65 1248 4257 6059 6233 65 Size: 1183 3009 1802 174 1396 Fragments arranged by size: 3009 1802 1396 1183 174 BsrFI r'CCGG_y Cuts at: 1700 1810 2947 6208 6395 1700 Size: 110 1137 3261 187 2869 Fragments arranged by size: 3261 2869 1137 187 110 BsrGI T'GTAC_A Cuts at: 96 96 Size: 7564 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 7564 BssSI C'ACGA_G Cuts at: 5624 6636 5624 Size: 1012 6552 BstAPI GCAn_nnn'nTGC Cuts at: 794 794 Size: 7564 BstBI TT'CG_AA Cuts at: 6368 6368 Size: 7564 BstEII G'GTnAC_C Cuts at: 1184 1184 Size: 7564 BstXI CCAn_nnnn'nTGG Cuts at: 4391 4391 Size: 7564 BstYI r'GATC_y Cuts at: 1972 2212 3268 3900 4894 5261 5646 5663 7115 Size: 240 1056 632 994 367 385 17 1452 Cuts at: 7115 7201 7213 7559 1972 Size: 86 12 346 1977 Fragments arranged by size: 1977 1452 1056 994 632 385 367 346 240 86 17 12 BtgI C'CryG_G Cuts at: 513 1065 2004 2892 3018 4417 4423 4444 4599 Size: 552 939 888 126 1399 6 21 155 Cuts at: 4599 4693 513 Size: 94 3384 Fragments arranged by size: 3384 1399 939 888 552 155 126 94 21 6 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 2922 487 Size: 683 56 1696 5129 Fragments arranged by size: 5129 1696 683 56 BtsI GCAGTG_nn' Cuts at: 2437 5080 5874 5894 2437 Size: 2643 794 20 4107 Fragments arranged by size: 4107 2643 794 20 ClaI AT'CG_AT Cuts at: 1554 2112 1554 Size: 558 7006 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 2724 2759 529 Size: 35 2160 35 5334 Fragments arranged by size: 5334 2160 35 35 DraI TTT'AAA Cuts at: 4868 4868 Size: 7564 DraIII CAC_nnn'GTG Cuts at: 4730 4753 4730 Size: 23 7541 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 6571 809 Size: 507 5255 1802 Fragments arranged by size: 5255 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 2820 4229 4283 Size: 54 1425 50 275 18 990 1409 54 Cuts at: 4283 4420 4447 4534 4785 5011 5900 7529 8 Size: 137 27 87 251 226 889 1629 43 Fragments arranged by size: 1629 1425 1409 990 889 275 251 226 137 87 54 54 50 43 27 18 EagI C'GGCC_G Cuts at: 1537 1812 4447 5011 1537 Size: 275 2635 564 4090 Fragments arranged by size: 4090 2635 564 275 EarI CTCTTCn'nnn_ Cuts at: 1353 2196 2766 2796 3576 5494 1353 Size: 843 570 30 780 1918 3423 Fragments arranged by size: 3423 1918 843 780 570 30 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 2024 2138 4204 4779 4794 6151 Size: 1064 138 435 114 2066 575 15 1357 Cuts at: 6151 6525 6671 387 Size: 374 146 1280 Fragments arranged by size: 2066 1357 1280 1064 575 435 374 146 138 114 15 EcoICRI GAG'CTC Cuts at: 2980 3004 3150 2980 Size: 24 146 7394 Fragments arranged by size: 7394 146 24 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2150 2303 2384 2421 2436 2732 3636 Size: 393 518 153 81 37 15 296 904 Cuts at: 3636 4055 4085 5627 6224 7011 7279 1239 Size: 419 30 1542 597 787 268 1524 Fragments arranged by size: 1542 1524 904 787 597 518 419 393 296 268 153 81 37 30 15 EcoO109I rG'GnC_Cy Cuts at: 2039 2776 4194 4430 4654 4665 2039 Size: 737 1418 236 224 11 4938 Fragments arranged by size: 4938 1418 737 236 224 11 EcoRI G'AATT_C Cuts at: 4873 5251 4873 Size: 378 7186 EcoRV GAT'ATC Cuts at: 4265 4265 Size: 7564 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 2642 2642 Size: 7564 FspI TGC'GCA Cuts at: 6070 6070 Size: 7564 HaeII r_GCGC'y Cuts at: 1678 2793 3135 3880 4027 4147 4444 6711 1678 Size: 1115 342 745 147 120 297 2267 2531 Fragments arranged by size: 2531 2267 1115 745 342 297 147 120 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 3420 3452 3732 3764 3787 Size: 32 135 32 1848 32 280 32 23 Cuts at: 3787 3794 3819 3824 3826 3856 6205 6237 6279 Size: 7 25 5 2 30 2349 32 42 Cuts at: 6279 6311 1373 Size: 32 2626 Fragments arranged by size: 2626 2349 1848 280 135 42 32 32 32 32 32 32 30 25 23 7 5 2 HincII GTy'rAC Cuts at: 669 1657 1938 2832 3372 3529 4908 5154 669 Size: 988 281 894 540 157 1379 246 3079 Fragments arranged by size: 3079 1379 988 894 540 281 246 157 HindIII A'AGCT_T Cuts at: 748 2759 3476 748 Size: 2011 717 4836 Fragments arranged by size: 4836 2011 717 HpaI GTT'AAC Cuts at: 5154 5154 Size: 7564 KasI G'GCGC_C Cuts at: 4143 4143 Size: 7564 KpnI G_GTAC'C Cuts at: 4889 4889 Size: 7564 MfeI C'AATT_G Cuts at: 5163 5163 Size: 7564 MluI A'CGCG_T Cuts at: 7440 7440 Size: 7564 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 3203 3507 4509 6678 6862 1305 Size: 1898 304 1002 2169 184 2007 Fragments arranged by size: 2169 2007 1898 1002 304 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 2822 4231 4422 4787 10 Size: 54 1425 343 990 1409 191 365 2787 Fragments arranged by size: 2787 1425 1409 990 365 343 191 54 MslI CAynn'nnrTG Cuts at: 518 1166 2399 3755 4082 4389 5522 5881 6040 Size: 648 1233 1356 327 307 1133 359 159 Cuts at: 6040 518 Size: 2042 Fragments arranged by size: 2042 1356 1233 1133 648 359 327 307 159 MspA1I CmG'CkG Cuts at: 1606 2512 2894 3213 3240 3889 3937 3997 4030 Size: 906 382 319 27 649 48 60 33 Cuts at: 4030 4159 4561 4695 4980 5657 6805 7050 1606 Size: 129 402 134 285 677 1148 245 2120 Fragments arranged by size: 2120 1148 906 677 649 402 382 319 285 245 134 129 60 48 33 27 NaeI GCC'GGC Cuts at: 2949 2949 Size: 7564 NarI GG'CG_CC Cuts at: 4144 4144 Size: 7564 NcoI C'CATG_G Cuts at: 513 1065 2004 4417 4599 513 Size: 552 939 2413 182 3478 Fragments arranged by size: 3478 2413 939 552 182 NdeI CA'TA_TG Cuts at: 387 387 Size: 7564 NgoMIV G'CCGG_C Cuts at: 2947 2947 Size: 7564 NheI G'CTAG_C Cuts at: 1052 4616 1052 Size: 3564 4000 NotI GC'GGCC_GC Cuts at: 5011 5011 Size: 7564 NspI r_CATG'y Cuts at: 1132 1229 2546 4081 4922 6467 1132 Size: 97 1317 1535 841 1545 2229 Fragments arranged by size: 2229 1545 1535 1317 841 97 PasI CC'CwG_GG Cuts at: 1348 4527 4741 1348 Size: 3179 214 4171 Fragments arranged by size: 4171 3179 214 PciI A'CATG_T Cuts at: 6463 6463 Size: 7564 PflMI CCAn_nnn'nTGG Cuts at: 1108 2444 2909 4033 1108 Size: 1336 465 1124 4639 Fragments arranged by size: 4639 1336 1124 465 PmeI GTTT'AAAC Cuts at: 4868 4868 Size: 7564 PmlI CAC'GTG Cuts at: 4750 4750 Size: 7564 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 5633 5665 7146 7178 5633 Size: 32 1481 32 6019 Fragments arranged by size: 6019 1481 32 32 PpuMI rG'GwC_Cy Cuts at: 2776 4430 2776 Size: 1654 5910 PshAI GACnn'nnGTC Cuts at: 1613 1613 Size: 7564 PsiI TTA'TAA Cuts at: 5134 5134 Size: 7564 PspOMI G'GGCC_C Cuts at: 2038 4664 2038 Size: 2626 4938 PspXI vC'TCGA_Gb Cuts at: 3956 4013 3956 Size: 57 7507 PstI C_TGCA'G Cuts at: 830 2376 4011 4916 830 Size: 1546 1635 905 3478 Fragments arranged by size: 3478 1635 1546 905 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 7564 PvuII CAG'CTG Cuts at: 2512 4159 2512 Size: 1647 5917 SacI G_AGCT'C Cuts at: 2982 3006 3152 2982 Size: 24 146 7394 Fragments arranged by size: 7394 146 24 SacII CC_GC'GG Cuts at: 2895 4696 2895 Size: 1801 5763 SalI G'TCGA_C Cuts at: 1936 3370 3527 4906 1936 Size: 1434 157 1379 4594 Fragments arranged by size: 4594 1434 1379 157 SbfI CC_TGCA'GG Cuts at: 4916 4916 Size: 7564 ScaI AGT'ACT Cuts at: 5812 7524 5812 Size: 1712 5852 SfcI C'TryA_G Cuts at: 826 1045 2372 2934 3992 4007 4912 6047 6728 Size: 219 1327 562 1058 15 905 1135 681 Cuts at: 6728 6919 826 Size: 191 1471 Fragments arranged by size: 1471 1327 1135 1058 905 681 562 219 191 15 SfiI GGCCn_nnn'nGGCC Cuts at: 4672 4672 Size: 7564 SfoI GGC'GCC Cuts at: 4145 4145 Size: 7564 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 7564 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 7564 SmaI CCC'GGG Cuts at: 1872 2023 2064 3339 4186 4891 1872 Size: 151 41 1275 847 705 4545 Fragments arranged by size: 4545 1275 847 705 151 41 SmlI C'TyrA_G Cuts at: 820 1017 1943 2183 3272 3956 4013 5668 6569 Size: 197 926 240 1089 684 57 1655 901 Cuts at: 6569 6831 820 Size: 262 1553 Fragments arranged by size: 1655 1553 1089 926 901 684 262 240 197 57 SnaBI TAC'GTA Cuts at: 493 5355 493 Size: 4862 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 7564 SphI G_CATG'C Cuts at: 1132 2546 4081 4922 1132 Size: 1414 1535 841 3774 Fragments arranged by size: 3774 1535 1414 841 SrfI GCCC'GGGC Cuts at: 2064 4186 2064 Size: 2122 5442 SspI AAT'ATT Cuts at: 5 52 5488 5 Size: 47 5436 2081 Fragments arranged by size: 5436 2081 47 StuI AGG'CCT Cuts at: 1517 2990 3962 1517 Size: 1473 972 5119 Fragments arranged by size: 5119 1473 972 StyI C'CwwG_G Cuts at: 513 1065 2004 4417 4599 5003 513 Size: 552 939 2413 182 404 3074 Fragments arranged by size: 3074 2413 939 552 404 182 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 3031 3663 4224 4275 4833 5591 5608 Size: 1255 1451 632 561 51 558 758 17 Cuts at: 5608 5761 5946 6391 325 Size: 153 185 445 1498 Fragments arranged by size: 1498 1451 1255 758 632 561 558 445 185 153 51 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 5810 7522 96 Size: 274 80 33 51 1443 3833 1712 138 Fragments arranged by size: 3833 1712 1443 274 138 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2911 2943 4230 4262 7524 7556 2911 Size: 32 1287 32 3262 32 2919 Fragments arranged by size: 3262 2919 1287 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1316 1316 Size: 7564 XbaI T'CTAG_A Cuts at: 3677 4900 3677 Size: 1223 6341 XhoI C'TCGA_G Cuts at: 1943 3956 4013 1943 Size: 2013 57 5494 Fragments arranged by size: 5494 2013 57 XmaI C'CCGG_G Cuts at: 1870 2021 2062 3337 4184 4889 1870 Size: 151 41 1275 847 705 4545 Fragments arranged by size: 4545 1275 847 705 151 41 XmnI GAAnn'nnTTC Cuts at: 3281 5693 3281 Size: 2412 5152 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 5372 276 Size: 53 83 186 936 3838 2468 Fragments arranged by size: 3838 2468 936 186 83 53 Enzymes that do cut: AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NspI PasI PciI PflMI PmeI PmlI PpiI PpuMI PshAI PsiI PspOMI PspXI PstI PvuI PvuII SacI SacII SalI SbfI ScaI SfcI SfiI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SrfI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XhoI XmaI XmnI ZraI Enzymes that do not cut: AarI AfeI AscI AvrII BaeI BbvCI BfrBI Bpu10I BsiWI BstZ17I Bsu36I EcoNI FseI FspAI NruI NsiI PacI PfoI PsrI RsrII SanDI SapI SexAI SwaI XcmI