Result of FASTA (ccds) for
pFN21AB7841
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7841, 504 aa
1>>>pF1KB7841 504 - 504 aa - 504 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4870+/-0.000986; mu= 8.4842+/- 0.060
mean_var=117.4324+/-23.715, 0's: 0 Z-trim(108.0): 16 B-trim: 0 in 0/52
Lambda= 0.118353
statistics sampled from 9938 (9952) to 9938 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.306), width: 16
Scan time: 2.800
The best scores are: opt bits E(32554)
CCDS46788.1 UBP1 gene_id:7342|Hs108|chr3 ( 504) 3376 587.5 1.1e-167
CCDS8808.1 TFCP2 gene_id:7024|Hs108|chr12 ( 502) 2517 440.9 1.6e-123
CCDS2659.1 UBP1 gene_id:7342|Hs108|chr3 ( 540) 1867 329.9 4.4e-90
CCDS2134.1 TFCP2L1 gene_id:29842|Hs108|chr2 ( 479) 1854 327.7 1.8e-89
CCDS55827.1 TFCP2 gene_id:7024|Hs108|chr12 ( 450) 1099 198.7 1.1e-50
CCDS33144.2 GRHL1 gene_id:29841|Hs108|chr2 ( 618) 385 76.9 7.4e-14
CCDS53284.1 GRHL3 gene_id:57822|Hs108|chr1 ( 556) 351 71.0 3.8e-12
CCDS44088.1 GRHL3 gene_id:57822|Hs108|chr1 ( 602) 351 71.1 4e-12
CCDS251.1 GRHL3 gene_id:57822|Hs108|chr1 ( 607) 351 71.1 4.1e-12
CCDS252.2 GRHL3 gene_id:57822|Hs108|chr1 ( 626) 351 71.1 4.2e-12
CCDS83312.1 GRHL2 gene_id:79977|Hs108|chr8 ( 609) 343 69.7 1e-11
CCDS34931.1 GRHL2 gene_id:79977|Hs108|chr8 ( 625) 343 69.7 1.1e-11
>>CCDS46788.1 UBP1 gene_id:7342|Hs108|chr3 (504 aa)
initn: 3376 init1: 3376 opt: 3376 Z-score: 3123.8 bits: 587.5 E(32554): 1.1e-167
Smith-Waterman score: 3376; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB7 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 STCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 STCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 LLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 NGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNF
430 440 450 460 470 480
490 500
pF1KB7 QDESCFLFSTVKAESSDGIHIILK
::::::::::::::::::::::::
CCDS46 QDESCFLFSTVKAESSDGIHIILK
490 500
>>CCDS8808.1 TFCP2 gene_id:7024|Hs108|chr12 (502 aa)
initn: 2124 init1: 1693 opt: 2517 Z-score: 2331.1 bits: 440.9 E(32554): 1.6e-123
Smith-Waterman score: 2517; 73.3% identity (90.4% similar) in 509 aa overlap (1-504:1-502)
10 20 30 40 50
pF1KB7 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG
:::.::. :::::::::.::::::::::::::::::::::::::::::::.:::: :.
CCDS88 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII
:.. :::::.:::::::::::::::::::::::::::::::::.:..:::::::::::.
CCDS88 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA
::::::::::::::::::::.:::::::.::.:::::::::: :.::.:::.::::::::
CCDS88 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP
::::.:::::::::::: ::::::::::::.:.::::.:::::::.::::::::::::::
CCDS88 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTS
:::::::::::::::::: ::::::::::.:::::::::::. .::::::::. :.:
CCDS88 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPE--ITYVNNSPSPG--FNS
250 260 270 280 290
300 310 320 330 340 350
pF1KB7 PQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFS
..:. :. ..:.: :::: . .. ... :..: ::.:::: .::::..::::.:::
CCDS88 -SHSSFSLGEGNGS-PNHQPEPPPPVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFS
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB7 GADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASS
::::::::..:..:::: ::::::.:.::.: ::::::::::.:. . : ::: ..
CCDS88 GADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQ
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB7 ASENG--SGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQ
:.: .:. .:::::::::. : :...:.: .:.: ::.:.:.:::::::.:.::.
CCDS88 KHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDE
420 430 440 450 460 470
480 490 500
pF1KB7 MVQNFQDESCFLFSTVKAESSDGIHIILK
:.::::.:.::...:.:::..:. :::::
CCDS88 MIQNFQEEACFILDTMKAETNDSYHIILK
480 490 500
>>CCDS2659.1 UBP1 gene_id:7342|Hs108|chr3 (540 aa)
initn: 3362 init1: 1847 opt: 1867 Z-score: 1730.8 bits: 329.9 E(32554): 4.4e-90
Smith-Waterman score: 3273; 93.3% identity (93.3% similar) in 536 aa overlap (1-500:1-536)
10 20 30 40 50 60
pF1KB7 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
190 200 210 220 230 240
250 260 270
pF1KB7 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE---------------------------
:::::::::::::::::::::::::::::::::
CCDS26 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY
250 260 270 280 290 300
280 290 300 310 320
pF1KB7 ---------CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB7 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB7 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
430 440 450 460 470 480
450 460 470 480 490 500
pF1KB7 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
490 500 510 520 530 540
>>CCDS2134.1 TFCP2L1 gene_id:29842|Hs108|chr2 (479 aa)
initn: 2156 init1: 1446 opt: 1854 Z-score: 1719.6 bits: 327.7 E(32554): 1.8e-89
Smith-Waterman score: 2176; 68.1% identity (89.2% similar) in 474 aa overlap (32-504:16-476)
10 20 30 40 50 60
pF1KB7 AWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETEH
.:.: . :::::::::::. .: ..:..
CCDS21 MLFWHTQPEHYNQHNSGSY-LRDVLALPIFKQEEPQLSPENEARL
10 20 30 40
70 80 90 100 110 120
pF1KB7 PPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVF
::.:::.:::::::::::.:::::::::::::::.:.:::.::. ..: : :::::::::
CCDS21 PPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 HDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTS
::::::::::::::::.:.:::::.::.:::.::::.: :..:.::::::::::::::.:
CCDS21 HDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRAS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 AFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGAD
::::::::::::::::::::::::::.:.::::::::::::.::::::::::::::::::
CCDS21 AFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGAD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 RKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAY-VNNSPSPAPTFTSPQQ
:::::::::::::::.:::::::::.:::::::::::: .:: ::..:::. . ::
CCDS21 RKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPD--VAYQVNSAPSPSYN-GSP--
230 240 250 260 270
310 320 330 340 350 360
pF1KB7 STCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGAD
.. .. ..:.: :.: . : ...... :::.::..:::: .::::.. :::..:::::
CCDS21 NSFGLGEGNAS-PTHPVE-ALPVGSDHLLPSASIQDAQQWLHRNRFSQFCRLFASFSGAD
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB7 LLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASE
:::....::::::: ::::::.:..:.:.:::..:::::.: .. : ::. .:..
CCDS21 LLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQNRV-PLQQKRDGSGDS
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB7 NGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNF
: : :::::.:::. . :. .:.: ...: ..:..::::::::::..::..:::::
CCDS21 NLS----VYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIHVVVSNEMVQNF
400 410 420 430 440 450
490 500
pF1KB7 QDESCFLFSTVKAESSDGIHIILK
::::::..::.::::.:: :::::
CCDS21 QDESCFVLSTIKAESNDGYHIILKCGL
460 470
>>CCDS55827.1 TFCP2 gene_id:7024|Hs108|chr12 (450 aa)
initn: 1850 init1: 1074 opt: 1099 Z-score: 1023.4 bits: 198.7 E(32554): 1.1e-50
Smith-Waterman score: 2057; 64.0% identity (80.4% similar) in 509 aa overlap (1-504:1-450)
10 20 30 40 50
pF1KB7 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG
:::.::. :::::::::.::::::::::::::::::::::::::::::::.:::: :.
CCDS55 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII
:.. :::::.:::::::::::::::::::::::::::::::::.:..:::::::::::.
CCDS55 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA
::::::::::::::::::::.:::::::.::.:::::::::: :.::.:::.::::::::
CCDS55 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP
::::.::: :
CCDS55 KRTSVFIQ---------------------------------------------------P
240 250 260 270 280 290
pF1KB7 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTS
:::::::::::::::::: ::::::::::.:::::::::::. .::::::::. :.:
CCDS55 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPE--ITYVNNSPSPG--FNS
190 200 210 220 230 240
300 310 320 330 340 350
pF1KB7 PQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFS
..:. :. ..:.: :::: . .. ... :..: ::.:::: .::::..::::.:::
CCDS55 -SHSSFSLGEGNGS-PNHQPEPPPPVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 GADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASS
::::::::..:..:::: ::::::.:.::.: ::::::::::.:. . : ::: ..
CCDS55 GADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQ
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB7 ASENG--SGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQ
:.: .:. .:::::::::. : :...:.: .:.: ::.:.:.:::::::.:.::.
CCDS55 KHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDE
370 380 390 400 410 420
480 490 500
pF1KB7 MVQNFQDESCFLFSTVKAESSDGIHIILK
:.::::.:.::...:.: :..:. :::::
CCDS55 MIQNFQEEACFILDTMK-ETNDSYHIILK
430 440 450
>>CCDS33144.2 GRHL1 gene_id:29841|Hs108|chr2 (618 aa)
initn: 284 init1: 106 opt: 385 Z-score: 362.3 bits: 76.9 E(32554): 7.4e-14
Smith-Waterman score: 385; 30.7% identity (56.8% similar) in 345 aa overlap (20-345:210-536)
10 20 30 40
pF1KB7 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDV-LALPIFKQ
:...: .: .. ::. : .: ...
CCDS33 TERVVVFDRNLNTDQFSSGAQAPNAQRRTPDSTFSETFKEGVQEVFFPSDLSLRMPGMNS
180 190 200 210 220 230
50 60 70 80 90 100
pF1KB7 EDSSLP-LDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPE
:: . ..:.. :.:.. :. : : : :.::::.:: : : . . . . .
CCDS33 EDYVFDSVSGNN----FEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSSEGIHH
240 250 260 270 280 290
110 120 130 140 150 160
pF1KB7 INGKLVKSIIRVVFHDRRLQYTEHQQLEGWK-WNR----PGDRLLDL-DIPMSVGIIDTR
.: :.:.: ::: . . ....::. :: :. .: .:. : : . : .
CCDS33 PISK-VRSVIMVVFAEDK---SREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTI-SN
300 310 320 330 340 350
170 180 190 200 210 220
pF1KB7 TNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEY
. ::. : :: ....::.:.:.::.:. .: : ::.:. :::::.. :. ..
CCDS33 IEEIAYNAISFTWDINDEAKVFISVNCLSTDFSSQK--GVKGLPLNIQVDTYSYNNRSNK
360 370 380 390 400
230 240 250 260 270 280
pF1KB7 TDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHE-KEKYQPSYDTTILTECSPWPDA
.: : :::::: :::.:: . ...:. :: . . : ::. .: .:. :
CCDS33 P--VHRAYCQIKVFCDKGAERKIRDEERKQSKRKVSDVKVPLLPSHKRMDITVFKPFIDL
410 420 430 440 450 460
290 300 310 320 330
pF1KB7 PTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQ-------IQPS--
: : :. :.. :..: .: .: . .:.:. : . ::
CCDS33 DTQPVLFIPDV--HFANLQRGTHVLP---IASEELEGEGSVLKRGPYGTEDDFAVPPSTK
470 480 490 500 510 520
340 350 360 370 380 390
pF1KB7 -ATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSV
: :.: .. :: :
CCDS33 LARIEEPKRVLLYVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFKKCKKG
530 540 550 560 570 580
>>CCDS53284.1 GRHL3 gene_id:57822|Hs108|chr1 (556 aa)
initn: 141 init1: 96 opt: 351 Z-score: 331.6 bits: 71.0 E(32554): 3.8e-12
Smith-Waterman score: 353; 24.9% identity (54.4% similar) in 458 aa overlap (54-504:175-554)
30 40 50 60 70 80
pF1KB7 SGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHDETL
: : . . :.:.. . . .: . .
CCDS53 RWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPM
150 160 170 180 190 200
90 100 110 120 130 140
pF1KB7 TYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWK-WN--
.:::.:: : . : . : .... :::.. ::: .... .::. :: :.
CCDS53 AYLNKGQFYPVT-LRTPAGGKGLALSSNKVKSVVMVVFDNEKVPV---EQLRFWKHWHSR
210 220 230 240 250 260
150 160 170 180 190
pF1KB7 RPG--DRLLDL-DIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRK
.: .:..:. : . . .. . . ::. :.:. .....:: :.:.::.:. .:
CCDS53 QPTAKQRVIDVADCKENFNTVE-HIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQK
270 280 290 300 310
200 210 220 230 240 250
pF1KB7 HGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASCQIKVFKPKGADRKQKTDREKMEKRTA
: ::::. .:.::. . : :..: : : ::::.: :::.::.. :..:. .: .
CCDS53 --GVKGVPLNLQIDTY---DCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKV
320 330 340 350 360 370
260 270 280 290 300 310
pF1KB7 HEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQ
. .. . . .: : . :.:. : . .: . .:. . :: ...
CCDS53 KCPDSSNSGVKGCLL---SGFRGNETTYLR----PETDLETPP--VLFIPNVHFSSLQRS
380 390 400 410 420
320 330 340 350 360 370
pF1KB7 GDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAA
: ::. ..: ::.. .. :: : .:. : . . : .:: .:
CCDS53 G-GAAPSAG----PSSS----NRLPLKRTCSPFTEEFEPLPS----KQAKEGDLQ-----
430 440 450 460
380 390 400 410 420 430
pF1KB7 DGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEE
:. .:: :: .:. :. :..:.
CCDS53 ----------------RVLLYVRRE-----------------TEE------VFDALMLKT
470 480
440 450 460 470 480 490
pF1KB7 MIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESS
. . .. ...: ..: .::.. :: . ......:..... ::.. .: .
CCDS53 PDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDM--GELD
490 500 510 520 530 540
500
pF1KB7 DGIHIILK
:.::::
CCDS53 GKIQIILKEL
550
>>CCDS44088.1 GRHL3 gene_id:57822|Hs108|chr1 (602 aa)
initn: 141 init1: 96 opt: 351 Z-score: 331.1 bits: 71.1 E(32554): 4e-12
Smith-Waterman score: 353; 24.9% identity (54.4% similar) in 458 aa overlap (54-504:221-600)
30 40 50 60 70 80
pF1KB7 SGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHDETL
: : . . :.:.. . . .: . .
CCDS44 RWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPM
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB7 TYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWK-WN--
.:::.:: : . : . : .... :::.. ::: .... .::. :: :.
CCDS44 AYLNKGQFYPVT-LRTPAGGKGLALSSNKVKSVVMVVFDNEKVPV---EQLRFWKHWHSR
260 270 280 290 300
150 160 170 180 190
pF1KB7 RPG--DRLLDL-DIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRK
.: .:..:. : . . .. . . ::. :.:. .....:: :.:.::.:. .:
CCDS44 QPTAKQRVIDVADCKENFNTVE-HIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQK
310 320 330 340 350 360
200 210 220 230 240 250
pF1KB7 HGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASCQIKVFKPKGADRKQKTDREKMEKRTA
: ::::. .:.::. . : :..: : : ::::.: :::.::.. :..:. .: .
CCDS44 --GVKGVPLNLQIDTY---DCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKV
370 380 390 400 410 420
260 270 280 290 300 310
pF1KB7 HEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQ
. .. . . .: : . :.:. : . .: . .:. . :: ...
CCDS44 KCPDSSNSGVKGCLL---SGFRGNETTYLR----PETDLETPP--VLFIPNVHFSSLQRS
430 440 450 460 470
320 330 340 350 360 370
pF1KB7 GDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAA
: ::. ..: ::.. .. :: : .:. : . . : .:: .:
CCDS44 G-GAAPSAG----PSSS----NRLPLKRTCSPFTEEFEPLPS----KQAKEGDLQ-----
480 490 500 510
380 390 400 410 420 430
pF1KB7 DGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEE
:. .:: :: .:. :. :..:.
CCDS44 ----------------RVLLYVRRE-----------------TEE------VFDALMLKT
520 530
440 450 460 470 480 490
pF1KB7 MIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESS
. . .. ...: ..: .::.. :: . ......:..... ::.. .: .
CCDS44 PDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDM--GELD
540 550 560 570 580 590
500
pF1KB7 DGIHIILK
:.::::
CCDS44 GKIQIILKEL
600
>>CCDS251.1 GRHL3 gene_id:57822|Hs108|chr1 (607 aa)
initn: 141 init1: 96 opt: 351 Z-score: 331.0 bits: 71.1 E(32554): 4.1e-12
Smith-Waterman score: 353; 24.9% identity (54.4% similar) in 458 aa overlap (54-504:226-605)
30 40 50 60 70 80
pF1KB7 SGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHDETL
: : . . :.:.. . . .: . .
CCDS25 RWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPM
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB7 TYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWK-WN--
.:::.:: : . : . : .... :::.. ::: .... .::. :: :.
CCDS25 AYLNKGQFYPVT-LRTPAGGKGLALSSNKVKSVVMVVFDNEKVPV---EQLRFWKHWHSR
260 270 280 290 300 310
150 160 170 180 190
pF1KB7 RPG--DRLLDL-DIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRK
.: .:..:. : . . .. . . ::. :.:. .....:: :.:.::.:. .:
CCDS25 QPTAKQRVIDVADCKENFNTVE-HIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQK
320 330 340 350 360 370
200 210 220 230 240 250
pF1KB7 HGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASCQIKVFKPKGADRKQKTDREKMEKRTA
: ::::. .:.::. . : :..: : : ::::.: :::.::.. :..:. .: .
CCDS25 --GVKGVPLNLQIDTY---DCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKV
380 390 400 410 420
260 270 280 290 300 310
pF1KB7 HEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQ
. .. . . .: : . :.:. : . .: . .:. . :: ...
CCDS25 KCPDSSNSGVKGCLL---SGFRGNETTYLR----PETDLETPP--VLFIPNVHFSSLQRS
430 440 450 460 470
320 330 340 350 360 370
pF1KB7 GDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAA
: ::. ..: ::.. .. :: : .:. : . . : .:: .:
CCDS25 G-GAAPSAG----PSSS----NRLPLKRTCSPFTEEFEPLPS----KQAKEGDLQ-----
480 490 500 510
380 390 400 410 420 430
pF1KB7 DGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEE
:. .:: :: .:. :. :..:.
CCDS25 ----------------RVLLYVRRE-----------------TEE------VFDALMLKT
520 530
440 450 460 470 480 490
pF1KB7 MIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESS
. . .. ...: ..: .::.. :: . ......:..... ::.. .: .
CCDS25 PDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDM--GELD
540 550 560 570 580 590
500
pF1KB7 DGIHIILK
:.::::
CCDS25 GKIQIILKEL
600
>>CCDS252.2 GRHL3 gene_id:57822|Hs108|chr1 (626 aa)
initn: 141 init1: 96 opt: 351 Z-score: 330.8 bits: 71.1 E(32554): 4.2e-12
Smith-Waterman score: 351; 28.5% identity (59.9% similar) in 274 aa overlap (54-314:221-484)
30 40 50 60 70 80
pF1KB7 SGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHDETL
: : . . :.:.. . . .: . .
CCDS25 RWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPM
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB7 TYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWK-WN--
.:::.:: : . : . : .... :::.. ::: .... .::. :: :.
CCDS25 AYLNKGQFYPVT-LRTPAGGKGLALSSNKVKSVVMVVFDNEKVPV---EQLRFWKHWHSR
260 270 280 290 300
150 160 170 180 190
pF1KB7 RPG--DRLLDL-DIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRK
.: .:..:. : . . .. . . ::. :.:. .....:: :.:.::.:. .:
CCDS25 QPTAKQRVIDVADCKENFNTVE-HIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQK
310 320 330 340 350 360
200 210 220 230 240 250
pF1KB7 HGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASCQIKVFKPKGADRKQKTDREKMEKRTA
: ::::. .:.::. . : :..: : : ::::.: :::.::.. :..:. .: .
CCDS25 --GVKGVPLNLQIDTY---DCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKV
370 380 390 400 410 420
260 270 280 290 300 310
pF1KB7 HEKEKYQPSYDTTILTECSPWPDA---PTAYVNNSPS---PAPTFTSPQQSTCSVPDSNS
. .. . . .:. . : . ... : : :.: :.: ..:...
CCDS25 KCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGP
430 440 450 460 470 480
320 330 340 350 360 370
pF1KB7 SSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLV
:: :
CCDS25 SSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTPDLKGL
490 500 510 520 530 540
504 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 09:52:06 2016 done: Sat Nov 5 09:52:07 2016
Total Scan time: 2.800 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]