Result of FASTA (omim) for
pFN21AB9422
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9422, 571 aa
1>>>pF1KB9422 571 - 571 aa - 571 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.8479+/-0.000582; mu= -11.5254+/- 0.036
mean_var=492.0398+/-102.595, 0's: 0 Z-trim(118.1): 95 B-trim: 96 in 2/54
Lambda= 0.057819
statistics sampled from 30657 (30750) to 30657 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.361), width: 16
Scan time: 9.810
The best scores are: opt bits E(85289)
NP_001008213 (OMIM: 137760,602432,606657,613435) o ( 577) 3596 315.3 3.5e-85
NP_001008212 (OMIM: 137760,602432,606657,613435) o ( 577) 3596 315.3 3.5e-85
NP_001008214 (OMIM: 137760,602432,606657,613435) o ( 577) 3596 315.3 3.5e-85
NP_068815 (OMIM: 137760,602432,606657,613435) opti ( 577) 3596 315.3 3.5e-85
NP_001308325 (OMIM: 300248,300291,300301,300584,30 ( 419) 495 56.5 2.1e-07
NP_003630 (OMIM: 300248,300291,300301,300584,30063 ( 419) 495 56.5 2.1e-07
NP_001093327 (OMIM: 300248,300291,300301,300584,30 ( 419) 495 56.5 2.1e-07
NP_001093326 (OMIM: 300248,300291,300301,300584,30 ( 487) 495 56.5 2.3e-07
NP_001308326 (OMIM: 300248,300291,300301,300584,30 ( 418) 493 56.3 2.3e-07
>>NP_001008213 (OMIM: 137760,602432,606657,613435) optin (577 aa)
initn: 2279 init1: 2279 opt: 3596 Z-score: 1650.3 bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)
10 20 30 40 50 60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
::::::::::::::::::::::::::::: :::::::::::::::::::::::::
NP_001 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
490 500 510 520 530 540
540 550 560 570
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
:::::::::::::::::::::::::::::::::::::
NP_001 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
550 560 570
>>NP_001008212 (OMIM: 137760,602432,606657,613435) optin (577 aa)
initn: 2279 init1: 2279 opt: 3596 Z-score: 1650.3 bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)
10 20 30 40 50 60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
::::::::::::::::::::::::::::: :::::::::::::::::::::::::
NP_001 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
490 500 510 520 530 540
540 550 560 570
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
:::::::::::::::::::::::::::::::::::::
NP_001 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
550 560 570
>>NP_001008214 (OMIM: 137760,602432,606657,613435) optin (577 aa)
initn: 2279 init1: 2279 opt: 3596 Z-score: 1650.3 bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)
10 20 30 40 50 60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
::::::::::::::::::::::::::::: :::::::::::::::::::::::::
NP_001 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
490 500 510 520 530 540
540 550 560 570
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
:::::::::::::::::::::::::::::::::::::
NP_001 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
550 560 570
>>NP_068815 (OMIM: 137760,602432,606657,613435) optineur (577 aa)
initn: 2279 init1: 2279 opt: 3596 Z-score: 1650.3 bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)
10 20 30 40 50 60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
::::::::::::::::::::::::::::: :::::::::::::::::::::::::
NP_068 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
490 500 510 520 530 540
540 550 560 570
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
:::::::::::::::::::::::::::::::::::::
NP_068 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
550 560 570
>>NP_001308325 (OMIM: 300248,300291,300301,300584,300636 (419 aa)
initn: 598 init1: 216 opt: 495 Z-score: 254.1 bits: 56.5 E(85289): 2.1e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:83-418)
210 220 230 240 250 260
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
...:. :. : ..::.. : :.
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
60 70 80 90 100
270 280 290 300 310 320
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
.. ... : : . .. . .. . .. . ... :::::. ::::....: : .
NP_001 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
110 120 130 140 150 160
330 340 350 360 370 380
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
:. . .: .. . :: . ..:. : ... :..: .:. . ..::. . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
170 180 190 200 210 220
390 400 410 420 430 440
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
::.....:.::..: .:. . ::. :..:...:. ::.::..:: .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
230 240 250 260 270 280
450 460 470 480 490 500
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
:. ... .::. .:.:: ..: .::.::: ::::. :.:: : :: : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
290 300 310 320 330 340
510 520 530 540 550
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
. ..: . .:..:: ...:.. ::: . : . :. .. : ::::
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
350 360 370 380 390 400
560 570
pF1KB9 LPDIDTLQIHVMDCII
::.::::::::.::
NP_001 APDMDTLQIHVMECIE
410
>>NP_003630 (OMIM: 300248,300291,300301,300584,300636,30 (419 aa)
initn: 598 init1: 216 opt: 495 Z-score: 254.1 bits: 56.5 E(85289): 2.1e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:83-418)
210 220 230 240 250 260
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
...:. :. : ..::.. : :.
NP_003 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
60 70 80 90 100
270 280 290 300 310 320
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
.. ... : : . .. . .. . .. . ... :::::. ::::....: : .
NP_003 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
110 120 130 140 150 160
330 340 350 360 370 380
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
:. . .: .. . :: . ..:. : ... :..: .:. . ..::. . .:: ::.
NP_003 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
170 180 190 200 210 220
390 400 410 420 430 440
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
::.....:.::..: .:. . ::. :..:...:. ::.::..:: .:..
NP_003 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
230 240 250 260 270 280
450 460 470 480 490 500
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
:. ... .::. .:.:: ..: .::.::: ::::. :.:: : :: : .: . ..
NP_003 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
290 300 310 320 330 340
510 520 530 540 550
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
. ..: . .:..:: ...:.. ::: . : . :. .. : ::::
NP_003 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
350 360 370 380 390 400
560 570
pF1KB9 LPDIDTLQIHVMDCII
::.::::::::.::
NP_003 APDMDTLQIHVMECIE
410
>>NP_001093327 (OMIM: 300248,300291,300301,300584,300636 (419 aa)
initn: 598 init1: 216 opt: 495 Z-score: 254.1 bits: 56.5 E(85289): 2.1e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:83-418)
210 220 230 240 250 260
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
...:. :. : ..::.. : :.
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
60 70 80 90 100
270 280 290 300 310 320
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
.. ... : : . .. . .. . .. . ... :::::. ::::....: : .
NP_001 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
110 120 130 140 150 160
330 340 350 360 370 380
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
:. . .: .. . :: . ..:. : ... :..: .:. . ..::. . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
170 180 190 200 210 220
390 400 410 420 430 440
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
::.....:.::..: .:. . ::. :..:...:. ::.::..:: .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
230 240 250 260 270 280
450 460 470 480 490 500
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
:. ... .::. .:.:: ..: .::.::: ::::. :.:: : :: : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
290 300 310 320 330 340
510 520 530 540 550
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
. ..: . .:..:: ...:.. ::: . : . :. .. : ::::
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
350 360 370 380 390 400
560 570
pF1KB9 LPDIDTLQIHVMDCII
::.::::::::.::
NP_001 APDMDTLQIHVMECIE
410
>>NP_001093326 (OMIM: 300248,300291,300301,300584,300636 (487 aa)
initn: 598 init1: 216 opt: 495 Z-score: 253.3 bits: 56.5 E(85289): 2.3e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:151-486)
210 220 230 240 250 260
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
...:. :. : ..::.. : :.
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
130 140 150 160 170
270 280 290 300 310 320
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
.. ... : : . .. . .. . .. . ... :::::. ::::....: : .
NP_001 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
180 190 200 210 220 230
330 340 350 360 370 380
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
:. . .: .. . :: . ..:. : ... :..: .:. . ..::. . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
240 250 260 270 280 290
390 400 410 420 430 440
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
::.....:.::..: .:. . ::. :..:...:. ::.::..:: .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
300 310 320 330 340 350
450 460 470 480 490 500
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
:. ... .::. .:.:: ..: .::.::: ::::. :.:: : :: : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
360 370 380 390 400 410
510 520 530 540 550
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
. ..: . .:..:: ...:.. ::: . : . :. .. : ::::
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
420 430 440 450 460 470
560 570
pF1KB9 LPDIDTLQIHVMDCII
::.::::::::.::
NP_001 APDMDTLQIHVMECIE
480
>>NP_001308326 (OMIM: 300248,300291,300301,300584,300636 (418 aa)
initn: 598 init1: 216 opt: 493 Z-score: 253.2 bits: 56.3 E(85289): 2.3e-07
Smith-Waterman score: 493; 31.0% identity (64.9% similar) in 345 aa overlap (236-570:83-417)
210 220 230 240 250 260
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
...:. :. : ..::.. : :.
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
60 70 80 90 100
270 280 290 300 310 320
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
.. ... : : . .: .. : . .. . ... :::::. ::::....: : .
NP_001 EKLDLKRQKEQAL-REVEHLKRCQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
110 120 130 140 150 160
330 340 350 360 370 380
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
:. . .: .. . :: . ..:. : ... :..: .:. . ..::. . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
170 180 190 200 210 220
390 400 410 420 430 440
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
::.....:.::..: .:. . ::. :..:...:. ::.::..:: .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
230 240 250 260 270 280
450 460 470 480 490 500
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
:. ... .::. .:.:: ..: .::.::: ::::. :.:: : :: : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
290 300 310 320 330 340
510 520 530 540 550
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
. ..: . .:..:: ...:.. ::: . : . :. .. : ::::
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
350 360 370 380 390 400
560 570
pF1KB9 LPDIDTLQIHVMDCII
::.::::::::.::
NP_001 APDMDTLQIHVMECIE
410
571 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:17:33 2016 done: Thu Nov 3 23:17:34 2016
Total Scan time: 9.810 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]