Result of FASTA (ccds) for
pFN21AB5343
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5343, 588 aa
1>>>pF1KB5343 588 - 588 aa - 588 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7741+/-0.00128; mu= -1.4083+/- 0.077
mean_var=255.2088+/-52.451, 0's: 0 Z-trim(109.1): 16 B-trim: 172 in 1/51
Lambda= 0.080284
statistics sampled from 10657 (10660) to 10657 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.327), width: 16
Scan time: 2.680
The best scores are: opt bits E(32554)
CCDS13880.1 PES1 gene_id:23481|Hs108|chr22 ( 588) 3866 461.6 1.3e-129
CCDS58802.1 PES1 gene_id:23481|Hs108|chr22 ( 583) 3816 455.8 7e-128
CCDS74842.1 PES1 gene_id:23481|Hs108|chr22 ( 449) 2950 355.4 9e-98
>>CCDS13880.1 PES1 gene_id:23481|Hs108|chr22 (588 aa)
initn: 3866 init1: 3866 opt: 3866 Z-score: 2440.6 bits: 461.6 E(32554): 1.3e-129
Smith-Waterman score: 3866; 100.0% identity (100.0% similar) in 588 aa overlap (1-588:1-588)
10 20 30 40 50 60
pF1KB5 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
490 500 510 520 530 540
550 560 570 580
pF1KB5 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
550 560 570 580
>>CCDS58802.1 PES1 gene_id:23481|Hs108|chr22 (583 aa)
initn: 2264 init1: 2023 opt: 3816 Z-score: 2409.3 bits: 455.8 E(32554): 7e-128
Smith-Waterman score: 3816; 99.1% identity (99.1% similar) in 588 aa overlap (1-588:1-583)
10 20 30 40 50 60
pF1KB5 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTDGE-----EDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
310 320 330 340 350
370 380 390 400 410 420
pF1KB5 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB5 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
480 490 500 510 520 530
550 560 570 580
pF1KB5 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
540 550 560 570 580
>>CCDS74842.1 PES1 gene_id:23481|Hs108|chr22 (449 aa)
initn: 2950 init1: 2950 opt: 2950 Z-score: 1868.8 bits: 355.4 E(32554): 9e-98
Smith-Waterman score: 2950; 100.0% identity (100.0% similar) in 449 aa overlap (140-588:1-449)
110 120 130 140 150 160
pF1KB5 NKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFM
::::::::::::::::::::::::::::::
CCDS74 MCFLFSTFPRTGKCHVQTIQLCRRLTVEFM
10 20 30
170 180 190 200 210 220
pF1KB5 HYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 HYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTT
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 LLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVP
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB5 ATEEEAEVDEFPTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ATEEEAEVDEFPTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRS
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB5 FGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLP
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB5 VAEYFSGVQLPPHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VAEYFSGVQLPPHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEG
280 290 300 310 320 330
470 480 490 500 510 520
pF1KB5 DGDEEGENEEEEEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DGDEEGENEEEEEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEE
340 350 360 370 380 390
530 540 550 560 570 580
pF1KB5 SEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
400 410 420 430 440
588 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:28:54 2016 done: Thu Nov 3 22:28:55 2016
Total Scan time: 2.680 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]