(Circular) (Six-base) MAPSORT of: pFN21AB4171.seq Check: 643 from: 1 to: 8158 pFN21AB4171 8158 bp With 182 enzymes: SgfI * January 16, 2009 15:25 .. AatII G_ACGT'C Cuts at: 278 331 414 600 1536 5968 278 Size: 53 83 186 936 4432 2468 Fragments arranged by size: 4432 2468 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 3559 5501 1937 Size: 1622 1942 4594 Fragments arranged by size: 4594 1942 1622 Acc65I G'GTAC_C Cuts at: 4213 5479 4213 Size: 1266 6892 AclI AA'CG_TT Cuts at: 1563 6285 6658 1563 Size: 4722 373 3063 Fragments arranged by size: 4722 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 4075 4619 4931 6221 7605 7873 1632 Size: 2443 544 312 1290 1384 268 1917 Fragments arranged by size: 2443 1917 1384 1290 544 312 268 AfeI AGC'GCT Cuts at: 2906 2906 Size: 8158 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 7961 AflIII A'CryG_T Cuts at: 1203 2203 2643 3834 7057 8034 1203 Size: 1000 440 1191 3223 977 1327 Fragments arranged by size: 3223 1327 1191 1000 977 440 AgeI A'CCGG_T Cuts at: 6989 6989 Size: 8158 AhdI GACnn_n'nnGTC Cuts at: 3106 6887 3106 Size: 3781 4377 AleI CACnn'nnGTG Cuts at: 1166 5441 1166 Size: 4275 3883 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 4740 5375 5414 1184 Size: 3556 635 39 3928 Fragments arranged by size: 3928 3556 635 39 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2510 2542 3947 3979 2510 Size: 32 1405 32 6689 Fragments arranged by size: 6689 1405 32 32 AlwNI CAG_nnn'CTG Cuts at: 2507 4876 5024 5069 5901 7473 2507 Size: 2369 148 45 832 1572 3192 Fragments arranged by size: 3192 2369 1572 832 148 45 ApaI G_GGCC'C Cuts at: 5101 5120 5101 Size: 19 8139 ApaLI G'TGCA_C Cuts at: 6215 7371 6215 Size: 1156 7002 ApoI r'AATT_y Cuts at: 1493 2300 5467 5693 5845 7954 1493 Size: 807 3167 226 152 2109 1697 Fragments arranged by size: 3167 2109 1697 807 226 152 AseI AT'TA_AT Cuts at: 160 1032 6712 160 Size: 872 5680 1606 Fragments arranged by size: 5680 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 8158 AvaI C'yCGr_G Cuts at: 1870 1943 2548 3344 4152 4371 4419 5419 5483 Size: 73 605 796 808 219 48 1000 64 Cuts at: 5483 1870 Size: 4545 Fragments arranged by size: 4545 1000 808 796 605 219 73 64 48 AvrII C'CTAG_G Cuts at: 2705 4060 2705 Size: 1355 6803 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 4841 4874 4841 Size: 33 8125 BamHI G'GATC_C Cuts at: 2649 2727 5488 5855 2649 Size: 78 2761 367 4952 Fragments arranged by size: 4952 2761 367 78 BanI G'GyrC_C Cuts at: 618 943 1160 1787 3128 3628 3715 4213 5301 Size: 325 217 627 1341 500 87 498 1088 Cuts at: 5301 5390 5479 6934 618 Size: 89 89 1455 1842 Fragments arranged by size: 1842 1455 1341 1088 627 500 498 325 217 89 89 87 BanII G_rGCy'C Cuts at: 1391 2454 3042 3340 4410 4933 5101 5120 5185 Size: 1063 588 298 1070 523 168 19 65 Cuts at: 5185 5426 5477 1391 Size: 241 51 4072 Fragments arranged by size: 4072 1070 1063 588 523 298 241 168 65 51 19 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2775 3021 4010 4035 4637 928 Size: 971 876 246 989 25 602 4449 Fragments arranged by size: 4449 989 971 876 602 246 25 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 3995 4029 6349 6383 1903 Size: 34 2058 34 2320 34 3678 Fragments arranged by size: 3678 2320 2058 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 2550 6050 7260 2550 Size: 3500 1210 3448 Fragments arranged by size: 3500 3448 1210 BclI T'GATC_A Cuts at: 1548 1548 Size: 8158 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 4133 4691 5336 Size: 107 122 71 631 605 2461 558 645 Cuts at: 5336 6769 136 Size: 1433 1525 Fragments arranged by size: 2461 1525 1433 645 631 605 558 122 107 71 BglII A'GATC_T Cuts at: 3384 8153 3384 Size: 4769 3389 BlpI GC'TnA_GC Cuts at: 4713 5575 4713 Size: 862 7296 Bme1580I G_kGCm'C Cuts at: 1790 2441 5101 5120 5304 6219 7375 1790 Size: 651 2660 19 184 915 1156 2573 Fragments arranged by size: 2660 2573 1156 915 651 184 19 BmgBI CAC'GTC Cuts at: 1318 1318 Size: 8158 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 2065 2626 3110 Size: 416 53 83 399 24 648 561 484 Cuts at: 3110 5358 5889 6847 442 Size: 2248 531 958 1753 Fragments arranged by size: 2248 1753 958 648 561 531 484 416 399 83 53 24 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 8158 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 3766 4210 3766 Size: 444 7714 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 3363 3944 4061 4841 4874 5046 5088 5199 Size: 2124 581 117 780 33 172 42 111 Cuts at: 5199 5388 6818 1239 Size: 189 1430 2579 Fragments arranged by size: 2579 2124 1430 780 581 189 172 117 111 42 33 Bpu10I CC'TnA_GC Cuts at: 3729 4338 3729 Size: 609 7549 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 6283 7148 7446 6283 Size: 865 298 6995 Fragments arranged by size: 6995 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 4533 4766 6821 882 Size: 617 3034 233 2055 2219 Fragments arranged by size: 3034 2219 2055 617 233 BsaAI yAC'GTr Cuts at: 493 1204 2646 5949 493 Size: 711 1442 3303 2702 Fragments arranged by size: 3303 2702 1442 711 BsaBI GATnn'nnATC Cuts at: 2862 8152 2862 Size: 5290 2868 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 5965 6347 6982 275 Size: 53 83 186 936 4432 382 635 1451 Fragments arranged by size: 4432 1451 936 635 382 186 83 53 BsaWI w'CCGG_w Cuts at: 6591 6989 7263 7410 7821 6591 Size: 398 274 147 411 6928 Fragments arranged by size: 6928 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 2510 2540 2786 2816 1178 Size: 30 165 30 1107 30 246 30 6520 Fragments arranged by size: 6520 1107 246 165 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 3020 4202 4364 4457 4502 4829 5253 1186 Size: 1834 1182 162 93 45 327 424 4091 Fragments arranged by size: 4091 1834 1182 424 327 162 93 45 BseYI C'CCAG_C Cuts at: 2653 3284 3683 5001 5027 5187 7361 7857 2653 Size: 631 399 1318 26 160 2174 496 2954 Fragments arranged by size: 2954 2174 1318 631 496 399 160 26 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 2420 2597 1163 Size: 573 684 177 6724 Fragments arranged by size: 6724 684 573 177 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 5608 6369 7397 1540 Size: 275 186 3607 761 1028 2301 Fragments arranged by size: 3607 2301 1028 761 275 186 BsiHKAI G_wGCw'C Cuts at: 4121 6219 6304 7375 4121 Size: 2098 85 1071 4904 Fragments arranged by size: 4904 2098 1071 85 BsmI GAATG_Cn' Cuts at: 5669 5762 5669 Size: 93 8065 BsmBI CGTCTCn'nnnn_ Cuts at: 3164 3716 3164 Size: 552 7606 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2441 2454 3042 3340 4121 4410 4933 Size: 399 651 13 588 298 781 289 523 Cuts at: 4933 5101 5120 5185 5304 5426 5477 6219 6304 Size: 168 19 65 119 122 51 742 85 Cuts at: 6304 7375 1391 Size: 1071 2174 Fragments arranged by size: 2174 1071 781 742 651 588 523 399 298 289 168 122 119 85 65 51 19 13 BspEI T'CCGG_A Cuts at: 7821 7821 Size: 8158 BspHI T'CATG_A Cuts at: 2586 3495 6047 7777 2586 Size: 909 2552 1730 2967 Fragments arranged by size: 2967 2552 1730 909 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2593 3246 5513 844 Size: 1749 653 2267 3489 Fragments arranged by size: 3489 2267 1749 653 BsrBI CCG'CTC Cuts at: 1394 1823 2221 3331 4342 4356 4645 6045 1394 Size: 429 398 1110 1011 14 289 1400 3507 Fragments arranged by size: 3507 1400 1110 1011 429 398 289 14 BsrDI GCAATG_nn' Cuts at: 65 1248 2218 2368 4311 6653 6827 65 Size: 1183 970 150 1943 2342 174 1396 Fragments arranged by size: 2342 1943 1396 1183 970 174 150 BsrFI r'CCGG_y Cuts at: 1700 1810 6802 6989 1700 Size: 110 4992 187 2869 Fragments arranged by size: 4992 2869 187 110 BsrGI T'GTAC_A Cuts at: 96 2164 3837 3939 96 Size: 2068 1673 102 4315 Fragments arranged by size: 4315 2068 1673 102 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 8158 BssSI C'ACGA_G Cuts at: 3888 6218 7230 3888 Size: 2330 1012 4816 Fragments arranged by size: 4816 2330 1012 BstAPI GCAn_nnn'nTGC Cuts at: 794 3881 794 Size: 3087 5071 BstBI TT'CG_AA Cuts at: 4243 6962 4243 Size: 2719 5439 BstEII G'GTnAC_C Cuts at: 1184 5434 1184 Size: 4250 3908 BstXI CCAn_nnnn'nTGG Cuts at: 4225 4225 Size: 8158 BstYI r'GATC_y Cuts at: 1972 2649 2727 3384 5488 5855 6240 6257 7709 Size: 677 78 657 2104 367 385 17 1452 Cuts at: 7709 7795 7807 8153 1972 Size: 86 12 346 1977 Fragments arranged by size: 2104 1977 1452 677 657 385 367 346 86 78 17 12 Bsu36I CC'TnA_GG Cuts at: 3651 3651 Size: 8158 BtgI C'CryG_G Cuts at: 513 1065 2004 2055 4218 5044 5230 513 Size: 552 939 51 2163 826 186 3441 Fragments arranged by size: 3441 2163 939 826 552 186 51 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 7419 Fragments arranged by size: 7419 683 56 BtsI GCAGTG_nn' Cuts at: 4312 4710 5098 5292 5375 5674 6468 6488 4312 Size: 398 388 194 83 299 794 20 5982 Fragments arranged by size: 5982 794 398 388 299 194 83 20 ClaI AT'CG_AT Cuts at: 1554 1554 Size: 8158 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 8123 DraI TTT'AAA Cuts at: 5462 5462 Size: 8158 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 4547 7165 809 Size: 507 3231 2618 1802 Fragments arranged by size: 3231 2618 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 2992 4692 4878 Size: 54 1425 50 275 18 1162 1700 186 Cuts at: 4878 5605 6494 8123 8 Size: 727 889 1629 43 Fragments arranged by size: 1700 1629 1425 1162 889 727 275 186 54 50 43 18 EagI C'GGCC_G Cuts at: 1537 1812 5605 1537 Size: 275 3793 4090 Fragments arranged by size: 4090 3793 275 EarI CTCTTCn'nnn_ Cuts at: 1353 2559 2585 2891 2997 3057 4203 4523 6088 Size: 1206 26 306 106 60 1146 320 1565 Cuts at: 6088 1353 Size: 3423 Fragments arranged by size: 3423 1565 1206 1146 320 306 106 60 26 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 3570 4295 6745 7119 7265 387 Size: 1064 138 1981 725 2450 374 146 1280 Fragments arranged by size: 2450 1981 1280 1064 725 374 146 138 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 3363 3944 4061 4075 4619 4841 4874 Size: 393 1731 581 117 14 544 222 33 Cuts at: 4874 4931 5046 5088 5199 5388 6221 6818 7605 Size: 57 115 42 111 189 833 597 787 Cuts at: 7605 7873 1239 Size: 268 1524 Fragments arranged by size: 1731 1524 833 787 597 581 544 393 268 222 189 117 115 111 57 42 33 14 EcoNI CCTnn'n_nnAGG Cuts at: 3023 3242 3783 3023 Size: 219 541 7398 Fragments arranged by size: 7398 541 219 EcoO109I rG'GnC_Cy Cuts at: 2960 3575 4064 5097 5098 5117 2960 Size: 615 489 1033 1 19 6001 Fragments arranged by size: 6001 1033 615 489 19 1 EcoRI G'AATT_C Cuts at: 5467 5845 5467 Size: 378 7780 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 3461 3461 Size: 8158 FspI TGC'GCA Cuts at: 3827 6664 3827 Size: 2837 5321 HaeII r_GCGC'y Cuts at: 1678 2908 7305 1678 Size: 1230 4397 2531 Fragments arranged by size: 4397 2531 1230 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 3026 3058 3092 3124 3214 Size: 32 135 32 1454 32 34 32 90 Cuts at: 3214 3246 3602 3634 4505 4537 4915 4947 6799 Size: 32 356 32 871 32 378 32 1852 Cuts at: 6799 6831 6873 6905 1373 Size: 32 42 32 2626 Fragments arranged by size: 2626 1852 1454 871 378 356 135 90 42 34 32 32 32 32 32 32 32 32 32 32 HincII GTy'rAC Cuts at: 669 1657 1938 3088 3560 5148 5502 5748 669 Size: 988 281 1150 472 1588 354 246 3079 Fragments arranged by size: 3079 1588 1150 988 472 354 281 246 HindIII A'AGCT_T Cuts at: 748 748 Size: 8158 HpaI GTT'AAC Cuts at: 5748 5748 Size: 8158 KpnI G_GTAC'C Cuts at: 4217 5483 4217 Size: 1266 6892 MfeI C'AATT_G Cuts at: 5757 5757 Size: 8158 MluI A'CGCG_T Cuts at: 8034 8034 Size: 8158 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 2714 4770 4972 7272 7456 1305 Size: 1409 2056 202 2300 184 2007 Fragments arranged by size: 2300 2056 2007 1409 202 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 2994 10 Size: 54 1425 343 1162 5174 Fragments arranged by size: 5174 1425 1162 343 54 MslI CAynn'nnrTG Cuts at: 518 1166 2009 3597 3833 5441 6116 6475 6634 Size: 648 843 1588 236 1608 675 359 159 Cuts at: 6634 518 Size: 2042 Fragments arranged by size: 2042 1608 1588 843 675 648 359 236 159 MspA1I CmG'CkG Cuts at: 1606 2057 2291 4676 4909 5177 5298 5342 5574 Size: 451 234 2385 233 268 121 44 232 Cuts at: 5574 6251 7399 7644 1606 Size: 677 1148 245 2120 Fragments arranged by size: 2385 2120 1148 677 451 268 245 234 233 232 121 44 NcoI C'CATG_G Cuts at: 513 1065 2004 5044 5230 513 Size: 552 939 3040 186 3441 Fragments arranged by size: 3441 3040 939 552 186 NdeI CA'TA_TG Cuts at: 387 387 Size: 8158 NheI G'CTAG_C Cuts at: 1052 1052 Size: 8158 NotI GC'GGCC_GC Cuts at: 5605 5605 Size: 8158 NspI r_CATG'y Cuts at: 1132 1229 2207 3811 3838 3974 5516 7061 1132 Size: 97 978 1604 27 136 1542 1545 2229 Fragments arranged by size: 2229 1604 1545 1542 978 136 97 27 PasI CC'CwG_GG Cuts at: 1348 1348 Size: 8158 PciI A'CATG_T Cuts at: 2203 3834 7057 2203 Size: 1631 3223 3304 Fragments arranged by size: 3304 3223 1631 PflMI CCAn_nnn'nTGG Cuts at: 1108 3604 5050 1108 Size: 2496 1446 4216 Fragments arranged by size: 4216 2496 1446 PfoI T'CCnGG_A Cuts at: 2730 3921 5104 2730 Size: 1191 1183 5784 Fragments arranged by size: 5784 1191 1183 PmeI GTTT'AAAC Cuts at: 5462 5462 Size: 8158 PmlI CAC'GTG Cuts at: 2646 2646 Size: 8158 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2510 2542 6227 6259 7740 7772 2510 Size: 32 3685 32 1481 32 2896 Fragments arranged by size: 3685 2896 1481 32 32 32 PpuMI rG'GwC_Cy Cuts at: 2960 2960 Size: 8158 PshAI GACnn'nnGTC Cuts at: 1613 1613 Size: 8158 PsiI TTA'TAA Cuts at: 5728 5728 Size: 8158 PspOMI G'GGCC_C Cuts at: 5097 5116 5097 Size: 19 8139 PstI C_TGCA'G Cuts at: 830 3639 3877 5155 5510 830 Size: 2809 238 1278 355 3478 Fragments arranged by size: 3478 2809 1278 355 238 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 8158 PvuII CAG'CTG Cuts at: 2291 4909 5177 5342 2291 Size: 2618 268 165 5107 Fragments arranged by size: 5107 2618 268 165 SacII CC_GC'GG Cuts at: 2058 2058 Size: 8158 SalI G'TCGA_C Cuts at: 1936 3558 5500 1936 Size: 1622 1942 4594 Fragments arranged by size: 4594 1942 1622 SbfI CC_TGCA'GG Cuts at: 5510 5510 Size: 8158 ScaI AGT'ACT Cuts at: 2045 6406 8118 2045 Size: 4361 1712 2085 Fragments arranged by size: 4361 2085 1712 SexAI A'CCwGG_T Cuts at: 3540 3711 3540 Size: 171 7987 SfcI C'TryA_G Cuts at: 826 1045 3635 3873 4437 5070 5151 5506 6641 Size: 219 2590 238 564 633 81 355 1135 Cuts at: 6641 7322 7513 826 Size: 681 191 1471 Fragments arranged by size: 2590 1471 1135 681 633 564 355 238 219 191 81 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 8158 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 8158 SmaI CCC'GGG Cuts at: 1872 2550 5485 1872 Size: 678 2935 4545 Fragments arranged by size: 4545 2935 678 SmlI C'TyrA_G Cuts at: 820 1017 1943 6262 7163 7425 820 Size: 197 926 4319 901 262 1553 Fragments arranged by size: 4319 1553 926 901 262 197 SnaBI TAC'GTA Cuts at: 493 5949 493 Size: 5456 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 8158 SphI G_CATG'C Cuts at: 1132 5516 1132 Size: 4384 3774 SspI AAT'ATT Cuts at: 5 52 6082 5 Size: 47 6030 2081 Fragments arranged by size: 6030 2081 47 StuI AGG'CCT Cuts at: 1517 4055 1517 Size: 2538 5620 StyI C'CwwG_G Cuts at: 513 1065 2004 2394 2705 3678 4060 4224 4410 Size: 552 939 390 311 973 382 164 186 Cuts at: 4410 5044 5230 5597 513 Size: 634 186 367 3074 Fragments arranged by size: 3074 973 939 634 552 390 382 367 311 186 186 164 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 2149 3152 4283 5319 6185 6202 6355 Size: 1255 569 1003 1131 1036 866 17 153 Cuts at: 6355 6540 6985 325 Size: 185 445 1498 Fragments arranged by size: 1498 1255 1131 1036 1003 866 569 445 185 153 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 2043 2164 3837 Size: 274 80 33 51 1443 66 121 1673 Cuts at: 3837 3939 6404 8116 96 Size: 102 2465 1712 138 Fragments arranged by size: 2465 1712 1673 1443 274 138 121 102 80 66 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 5025 5057 8118 8150 5025 Size: 32 3061 32 5033 Fragments arranged by size: 5033 3061 32 32 Tth111I GACn'n_nGTC Cuts at: 1316 1316 Size: 8158 XbaI T'CTAG_A Cuts at: 2557 5494 2557 Size: 2937 5221 XcmI CCAnnnn_n'nnnnTGG Cuts at: 3139 4225 3139 Size: 1086 7072 XhoI C'TCGA_G Cuts at: 1943 1943 Size: 8158 XmaI C'CCGG_G Cuts at: 1870 2548 5483 1870 Size: 678 2935 4545 Fragments arranged by size: 4545 2935 678 XmnI GAAnn'nnTTC Cuts at: 6287 6287 Size: 8158 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 5966 276 Size: 53 83 186 936 4432 2468 Fragments arranged by size: 4432 2468 936 186 83 53 Enzymes that do cut: AatII AccI Acc65I AclI AcuI AfeI AflII AflIII AgeI AhdI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI AvrII BaeI BamHI BanI BanII BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI ClaI CspCI DraI DrdI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII HpaI KpnI MfeI MluI MmeI MscI MslI MspA1I NcoI NdeI NheI NotI NspI PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PshAI PsiI PspOMI PstI PvuI PvuII SacII SalI SbfI ScaI SexAI SfcI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AarI AscI BbeI BbvCI BfrBI BsiWI BstZ17I DraIII EcoICRI EcoRV FseI FspAI KasI NaeI NarI NgoMIV NruI NsiI PacI PspXI PsrI RsrII SacI SanDI SapI SfiI SfoI SrfI SwaI