Restriction map for pFN21AB3844
 (Circular) (Six-base) MAPSORT of: pFN21AB3844.seq  Check: 1948  from: 1  to: 6727



pFN21AB3844  6727 bp

 With 182 enzymes: SgfI * 

                        February 27, 2009 14:35  ..

AarI CACCTGCnnnn'nnnn_

Cuts at:   2171    2412    2826    2171 
   Size:        241     414    6072

  Fragments arranged by size: 

                6072     414     241
 
AatII G_ACGT'C

Cuts at:    278     331     414     600    1536    4537     278 
   Size:         53      83     186     936    3001    2468

  Fragments arranged by size: 

                3001    2468     936     186      83      53
 
AccI GT'mk_AC

Cuts at:   1937    4070    1937 
   Size:       2133    4594
 
Acc65I G'GTAC_C

Cuts at:   4048    4048 
   Size:       6727
 
AclI AA'CG_TT

Cuts at:   1563    4854    5227    1563 
   Size:       3291     373    3063

  Fragments arranged by size: 

                3291    3063     373
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:   1632    2719    4790    6174    6442    1632 
   Size:       1087    2071    1384     268    1917

  Fragments arranged by size: 

                2071    1917    1384    1087     268
 
AflII C'TTAA_G

Cuts at:    820    1017     820 
   Size:        197    6530
 
AflIII A'CryG_T

Cuts at:   1203    5626    6603    1203 
   Size:       4423     977    1327

  Fragments arranged by size: 

                4423    1327     977
 
AgeI A'CCGG_T

Cuts at:   5558    5558 
   Size:       6727
 
AhdI GACnn_n'nnGTC

Cuts at:   5456    5456 
   Size:       6727
 
AleI CACnn'nnGTG

Cuts at:   1166    2069    3571    1166 
   Size:        903    1502    4322

  Fragments arranged by size: 

                4322    1502     903
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1184    2474    2859    1184 
   Size:       1290     385    5052

  Fragments arranged by size: 

                5052    1290     385
 
AloI GAACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:   2093    2125    2093 
   Size:         32    6695
 
AlwNI CAG_nnn'CTG

Cuts at:   2974    3868    3942    4470    6042    2974 
   Size:        894      74     528    1572    3659

  Fragments arranged by size: 

                3659    1572     894     528      74
 
ApaI G_GGCC'C

Cuts at:   3083    3083 
   Size:       6727
 
ApaLI G'TGCA_C

Cuts at:   3734    4784    5940    3734 
   Size:       1050    1156    4521

  Fragments arranged by size: 

                4521    1156    1050
 
ApoI r'AATT_y

Cuts at:   1493    4036    4262    4414    6523    1493 
   Size:       2543     226     152    2109    1697

  Fragments arranged by size: 

                2543    2109    1697     226     152
 
AseI AT'TA_AT

Cuts at:    160    1032    5281     160 
   Size:        872    4249    1606

  Fragments arranged by size: 

                4249    1606     872
 
AsiSI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       6727
 
AvaI C'yCGr_G

Cuts at:   1870    1943    2584    3759    4052    1870 
   Size:         73     641    1175     293    4545

  Fragments arranged by size: 

                4545    1175     641     293      73
 
BamHI G'GATC_C

Cuts at:   4057    4424    4057 
   Size:        367    6360
 
BanI G'GyrC_C

Cuts at:    618     943    1160    1787    2679    3308    3971    4048    5503 
   Size:        325     217     627     892     629     663      77    1455

Cuts at:   5503     618 
   Size:       1842

  Fragments arranged by size: 

                1842    1455     892     663     629     627     325     217
                  77
 
BanII G_rGCy'C

Cuts at:   1391    2127    2763    3083    3440    3501    4046    1391 
   Size:        736     636     320     357      61     545    4072

  Fragments arranged by size: 

                4072     736     636     545     357     320      61
 
BbeI G_GCGC'C

Cuts at:   2683    3312    2683 
   Size:        629    6098
 
BbsI GAAGACnn'nnnn_

Cuts at:    928    1899    3688     928 
   Size:        971    1789    3967

  Fragments arranged by size: 

                3967    1789     971
 
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1903    1937    4918    4952    1903 
   Size:         34    2981      34    3678

  Fragments arranged by size: 

                3678    2981      34      34
 
BciVI GTATCCnnnnn_n'

Cuts at:   4619    5829    4619 
   Size:       1210    5517
 
BclI T'GATC_A

Cuts at:   1548    1548 
   Size:       6727
 
BglI GCCn_nnn'nGGC

Cuts at:    136     243     365     436    1067    1672    3173    3344    5338 
   Size:        107     122      71     631     605    1501     171    1994

Cuts at:   5338     136 
   Size:       1525

  Fragments arranged by size: 

                1994    1525    1501     631     605     171     122     107
                  71
 
BglII A'GATC_T

Cuts at:   6722    6722 
   Size:       6727
 
BlpI GC'TnA_GC

Cuts at:   4144    4144 
   Size:       6727
 
Bme1580I G_kGCm'C

Cuts at:   1790    3083    3738    4788    5944    1790 
   Size:       1293     655    1050    1156    2573

  Fragments arranged by size: 

                2573    1293    1156    1050     655
 
BmgBI CAC'GTC

Cuts at:   1318    1318 
   Size:       6727
 
BmrI ACTGGGnnnn_n'

Cuts at:    442     858     911     994    1393    1417    3037    4458    5416 
   Size:        416      53      83     399      24    1620    1421     958

Cuts at:   5416     442 
   Size:       1753

  Fragments arranged by size: 

                1753    1620    1421     958     416     399      83      53
                  24
 
BmtI G_CTAG'C

Cuts at:   1056    1056 
   Size:       6727
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    2483    2624    2912    3515    5387    1239 
   Size:       1244     141     288     603    1872    2579

  Fragments arranged by size: 

                2579    1872    1244     603     288     141
 
Bpu10I CC'TnA_GC

Cuts at:   2555    2570    2978    2555 
   Size:         15     408    6304

  Fragments arranged by size: 

                6304     408      15
 
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'

Cuts at:   2294    2525    3224    4852    5717    6015    2294 
   Size:        231     699    1628     865     298    3006

  Fragments arranged by size: 

                3006    1628     865     699     298     231
 
BsaI GGTCTCn'nnnn_

Cuts at:    882    1499    3443    3530    5390     882 
   Size:        617    1944      87    1860    2219

  Fragments arranged by size: 

                2219    1944    1860     617      87
 
BsaAI yAC'GTr

Cuts at:    493    1204    3331    3366    3553    3733    3904    4518     493 
   Size:        711    2127      35     187     180     171     614    2702

  Fragments arranged by size: 

                2702    2127     711     614     187     180     171      35
            
 
BsaBI GATnn'nnATC

Cuts at:   6721    6721 
   Size:       6727
 
BsaHI Gr'CG_yC

Cuts at:    275     328     411     597    1533    2250    2517    2680    3309 
   Size:         53      83     186     936     717     267     163     629

Cuts at:   3309    4534    4916    5551     275 
   Size:       1225     382     635    1451

  Fragments arranged by size: 

                1451    1225     936     717     635     629     382     267
                 186     163      83      53
 
BsaWI w'CCGG_w

Cuts at:   5160    5558    5832    5979    6390    5160 
   Size:        398     274     147     411    5497

  Fragments arranged by size: 

                5497     411     398     274     147
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:   1178    1208    1373    1403    2618    2648    3488    3518    1178 
   Size:         30     165      30    1215      30     840      30    4387

  Fragments arranged by size: 

                4387    1215     840     165      30      30      30      30
            
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:   1186    2525    2621    3379    3911    1186 
   Size:       1339      96     758     532    4002

  Fragments arranged by size: 

                4002    1339     758     532      96
 
BseYI C'CCAG_C

Cuts at:   2807    2967    3427    5930    6426    2807 
   Size:        160     460    2503     496    3108

  Fragments arranged by size: 

                3108    2503     496     460     160
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:   1163    1736    2348    2384    2456    3479    1163 
   Size:        573     612      36      72    1023    4411

  Fragments arranged by size: 

                4411    1023     612     573      72      36
 
BsiEI CG_ry'CG

Cuts at:   1540    1815    2001    2212    3048    4177    4938    5966    1540 
   Size:        275     186     211     836    1129     761    1028    2301

  Fragments arranged by size: 

                2301    1129    1028     836     761     275     211     186
            
 
BsiHKAI G_wGCw'C

Cuts at:   2763    3738    4788    4873    5944    2763 
   Size:        975    1050      85    1071    3546

  Fragments arranged by size: 

                3546    1071    1050     975      85
 
BsmI GAATG_Cn'

Cuts at:   4238    4331    4238 
   Size:         93    6634
 
BsmBI CGTCTCn'nnnn_

Cuts at:   3137    3137 
   Size:       6727
 
Bsp1286I G_dGCh'C

Cuts at:   1391    1790    2127    2763    3083    3440    3501    3738    4046 
   Size:        399     337     636     320     357      61     237     308

Cuts at:   4046    4788    4873    5944    1391 
   Size:        742      85    1071    2174

  Fragments arranged by size: 

                2174    1071     742     636     399     357     337     320
                 308     237      85      61
 
BspEI T'CCGG_A

Cuts at:   6390    6390 
   Size:       6727
 
BspHI T'CATG_A

Cuts at:   4616    6346    4616 
   Size:       1730    4997
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:    844    2103    2171    2274    2320    2385    2412    2709    2811 
   Size:       1259      68     103      46      65      27     297     102

Cuts at:   2811    2826    2841    3489    4082     844 
   Size:         15      15     648     593    3489

  Fragments arranged by size: 

                3489    1259     648     593     297     103     102      68
                  65      46      27      15      15
 
BsrBI CCG'CTC

Cuts at:   1394    1823    2385    2896    4614    1394 
   Size:        429     562     511    1718    3507

  Fragments arranged by size: 

                3507    1718     562     511     429
 
BsrDI GCAATG_nn'

Cuts at:     65    1248    2427    3550    5222    5396      65 
   Size:       1183    1179    1123    1672     174    1396

  Fragments arranged by size: 

                1672    1396    1183    1179    1123     174
 
BsrFI r'CCGG_y

Cuts at:   1700    1810    5371    5558    1700 
   Size:        110    3561     187    2869

  Fragments arranged by size: 

                3561    2869     187     110
 
BsrGI T'GTAC_A

Cuts at:     96      96 
   Size:       6727
 
BssHII G'CGCG_C

Cuts at:   1925    1925 
   Size:       6727
 
BssSI C'ACGA_G

Cuts at:   4787    5799    4787 
   Size:       1012    5715
 
BstAPI GCAn_nnn'nTGC

Cuts at:    794    2163    3868    3942     794 
   Size:       1369    1705      74    3579

  Fragments arranged by size: 

                3579    1705    1369      74
 
BstBI TT'CG_AA

Cuts at:   5531    5531 
   Size:       6727
 
BstEII G'GTnAC_C

Cuts at:   1184    2696    3526    1184 
   Size:       1512     830    4385

  Fragments arranged by size: 

                4385    1512     830
 
BstXI CCAn_nnnn'nTGG

Cuts at:   2011    3127    3319    2011 
   Size:       1116     192    5419

  Fragments arranged by size: 

                5419    1116     192
 
BstYI r'GATC_y

Cuts at:   1972    4057    4424    4809    4826    6278    6364    6376    6722 
   Size:       2085     367     385      17    1452      86      12     346

Cuts at:   6722    1972 
   Size:       1977

  Fragments arranged by size: 

                2085    1977    1452     385     367     346      86      17
                  12
 
BtgI C'CryG_G

Cuts at:    513    1065    2004    2079    2088    2935    3048    3186    3291 
   Size:        552     939      75       9     847     113     138     105

Cuts at:   3291    3297    3432    3531    3645    3847     513 
   Size:          6     135      99     114     202    3393

  Fragments arranged by size: 

                3393     939     847     552     202     138     135     114
                 113     105      99      75       9       6
 
BtgZI GCGATGnnnnnnnnnn'nnnn_

Cuts at:    487    1170    1226    2113    2704     487 
   Size:        683      56     887     591    4510

  Fragments arranged by size: 

                4510     887     683     591      56
 
BtsI GCAGTG_nn'

Cuts at:   2028    2046    3690    4243    5037    5057    2028 
   Size:         18    1644     553     794      20    3698

  Fragments arranged by size: 

                3698    1644     794     553      20      18
 
ClaI AT'CG_AT

Cuts at:   1554    1554 
   Size:       6727
 
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'

Cuts at:    529     564     529 
   Size:         35    6692
 
DraI TTT'AAA

Cuts at:   4031    4031 
   Size:       6727
 
DrdI GACnn_nn'nnGTC

Cuts at:    809    1316    5734     809 
   Size:        507    4418    1802

  Fragments arranged by size: 

                4418    1802     507
 
EaeI y'GGCC_r

Cuts at:      8      62    1487    1537    1812    1830    2061    2082    2706 
   Size:         54    1425      50     275      18     231      21     624

Cuts at:   2706    2784    2874    3045    3102    3165    3189    3294    3321 
   Size:         78      90     171      57      63      24     105      27

Cuts at:   3321    4174    5063    6692       8 
   Size:        853     889    1629      43

  Fragments arranged by size: 

                1629    1425     889     853     624     275     231     171
                 105      90      78      63      57      54      50      43
                  27      24      21      18
 
EagI C'GGCC_G

Cuts at:   1537    1812    3045    4174    1537 
   Size:        275    1233    1129    4090

  Fragments arranged by size: 

                4090    1233    1129     275
 
EarI CTCTTCn'nnn_

Cuts at:   1353    2555    3707    4657    1353 
   Size:       1202    1152     950    3423

  Fragments arranged by size: 

                3423    1202    1152     950
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:    387    1451    1589    5314    5688    5834     387 
   Size:       1064     138    3725     374     146    1280

  Fragments arranged by size: 

                3725    1280    1064     374     146     138
 
EcoICRI GAG'CTC

Cuts at:   2761    2761 
   Size:       6727
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    1632    2483    2624    2719    2912    3515    4790    5387 
   Size:        393     851     141      95     193     603    1275     597

Cuts at:   5387    6174    6442    1239 
   Size:        787     268    1524

  Fragments arranged by size: 

                1524    1275     851     787     603     597     393     268
                 193     141      95
 
EcoNI CCTnn'n_nnAGG

Cuts at:   2141    3944    2141 
   Size:       1803    4924
 
EcoO109I rG'GnC_Cy

Cuts at:   2305    2662    3064    3079    3080    3337    3768    2305 
   Size:        357     402      15       1     257     431    5264

  Fragments arranged by size: 

                5264     431     402     357     257      15       1
 
EcoRI G'AATT_C

Cuts at:   4036    4414    4036 
   Size:        378    6349
 
EcoRV GAT'ATC

Cuts at:   2239    2239 
   Size:       6727
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:   2566    2566 
   Size:       6727
 
FspI TGC'GCA

Cuts at:   2423    2774    5233    2423 
   Size:        351    2459    3917

  Fragments arranged by size: 

                3917    2459     351
 
FspAI rTGC'GCAy

Cuts at:   2423    2423 
   Size:       6727
 
HaeII r_GCGC'y

Cuts at:   1678    2683    2814    3312    5874    1678 
   Size:       1005     131     498    2562    2531

  Fragments arranged by size: 

                2562    2531    1005     498     131
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:   1373    1405    1540    1572    2471    2503    3488    3520    5368 
   Size:         32     135      32     899      32     985      32    1848

Cuts at:   5368    5400    5442    5474    1373 
   Size:         32      42      32    2626

  Fragments arranged by size: 

                2626    1848     985     899     135      42      32      32
                  32      32      32      32
 
HincII GTy'rAC

Cuts at:    669    1657    1938    2323    3055    4071    4317     669 
   Size:        988     281     385     732    1016     246    3079

  Fragments arranged by size: 

                3079    1016     988     732     385     281     246
 
HindIII A'AGCT_T

Cuts at:    748     748 
   Size:       6727
 
HpaI GTT'AAC

Cuts at:   4317    4317 
   Size:       6727
 
KasI G'GCGC_C

Cuts at:   2679    3308    2679 
   Size:        629    6098
 
KpnI G_GTAC'C

Cuts at:   4052    4052 
   Size:       6727
 
MfeI C'AATT_G

Cuts at:   4326    4326 
   Size:       6727
 
MluI A'CGCG_T

Cuts at:   6603    6603 
   Size:       6727
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:   1305    2934    3300    3951    5841    6025    1305 
   Size:       1629     366     651    1890     184    2007

  Fragments arranged by size: 

                2007    1890    1629     651     366     184
 
MscI TGG'CCA

Cuts at:     10      64    1489    1832    2708    2876    3104    3167    3296 
   Size:         54    1425     343     876     168     228      63     129

Cuts at:   3296    3323      10 
   Size:         27    3414

  Fragments arranged by size: 

                3414    1425     876     343     228     168     129      63
                  54      27
 
MslI CAynn'nnrTG

Cuts at:    518    1166    2009    2069    2478    3329    3521    3571    4685 
   Size:        648     843      60     409     851     192      50    1114

Cuts at:   4685    5044    5203     518 
   Size:        359     159    2042

  Fragments arranged by size: 

                2042    1114     851     843     648     409     359     192
                 159      60      50
 
MspA1I CmG'CkG

Cuts at:   1606    2181    2458    2647    2937    2971    3849    4143    4820 
   Size:        575     277     189     290      34     878     294     677

Cuts at:   4820    5968    6213    1606 
   Size:       1148     245    2120

  Fragments arranged by size: 

                2120    1148     878     677     575     294     290     277
                 245     189      34
 
NarI GG'CG_CC

Cuts at:   2680    3309    2680 
   Size:        629    6098
 
NcoI C'CATG_G

Cuts at:    513    1065    2004    2088    3291    3531    3645     513 
   Size:        552     939      84    1203     240     114    3595

  Fragments arranged by size: 

                3595    1203     939     552     240     114      84
 
NdeI CA'TA_TG

Cuts at:    387     387 
   Size:       6727
 
NheI G'CTAG_C

Cuts at:   1052    1052 
   Size:       6727
 
NotI GC'GGCC_GC

Cuts at:   4174    4174 
   Size:       6727
 
NspI r_CATG'y

Cuts at:   1132    1229    2654    4085    5630    1132 
   Size:         97    1425    1431    1545    2229

  Fragments arranged by size: 

                2229    1545    1431    1425      97
 
PasI CC'CwG_GG

Cuts at:   1348    3220    3854    1348 
   Size:       1872     634    4221

  Fragments arranged by size: 

                4221    1872     634
 
PciI A'CATG_T

Cuts at:   5626    5626 
   Size:       6727
 
PflMI CCAn_nnn'nTGG

Cuts at:   1108    3726    1108 
   Size:       2618    4109
 
PfoI T'CCnGG_A

Cuts at:   2391    3837    2391 
   Size:       1446    5281
 
PmeI GTTT'AAAC

Cuts at:   4031    4031 
   Size:       6727
 
PmlI CAC'GTG

Cuts at:   3331    3366    3331 
   Size:         35    6692
 
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   4796    4828    6309    6341    4796 
   Size:         32    1481      32    5182

  Fragments arranged by size: 

                5182    1481      32      32
 
PpuMI rG'GwC_Cy

Cuts at:   2305    2305 
   Size:       6727
 
PshAI GACnn'nnGTC

Cuts at:   1613    2144    2318    1613 
   Size:        531     174    6022

  Fragments arranged by size: 

                6022     531     174
 
PsiI TTA'TAA

Cuts at:   4297    4297 
   Size:       6727
 
PspOMI G'GGCC_C

Cuts at:   3079    3079 
   Size:       6727
 
PstI C_TGCA'G

Cuts at:    830    2271    2409    2823    2838    3864    4079     830 
   Size:       1441     138     414      15    1026     215    3478

  Fragments arranged by size: 

                3478    1441    1026     414     215     138      15
 
PvuI CG_AT'CG

Cuts at:   2001    2001 
   Size:       6727
 
PvuII CAG'CTG

Cuts at:   2971    2971 
   Size:       6727
 
SacI G_AGCT'C

Cuts at:   2763    2763 
   Size:       6727
 
SacII CC_GC'GG

Cuts at:   2938    3850    2938 
   Size:        912    5815
 
SalI G'TCGA_C

Cuts at:   1936    4069    1936 
   Size:       2133    4594
 
SapI GCTCTTCn'nnn_

Cuts at:   2555    2555 
   Size:       6727
 
SbfI CC_TGCA'GG

Cuts at:   2409    2838    4079    2409 
   Size:        429    1241    5057

  Fragments arranged by size: 

                5057    1241     429
 
ScaI AGT'ACT

Cuts at:   4975    6687    4975 
   Size:       1712    5015
 
SfcI C'TryA_G

Cuts at:    826    1045    2267    2405    2744    2819    2834    3860    4075 
   Size:        219    1222     138     339      75      15    1026     215

Cuts at:   4075    5210    5891    6082     826 
   Size:       1135     681     191    1471

  Fragments arranged by size: 

                1471    1222    1135    1026     681     339     219     215
                 191     138      75      15
 
SfoI GGC'GCC

Cuts at:   2681    3310    2681 
   Size:        629    6098
 
SgfI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       6727
 
SgrAI Cr'CCGG_yG

Cuts at:   1700    1700 
   Size:       6727
 
SmaI CCC'GGG

Cuts at:   1872    3761    4054    1872 
   Size:       1889     293    4545

  Fragments arranged by size: 

                4545    1889     293
 
SmlI C'TyrA_G

Cuts at:    820    1017    1943    2309    2540    3239    4831    5732    5994 
   Size:        197     926     366     231     699    1592     901     262

Cuts at:   5994     820 
   Size:       1553

  Fragments arranged by size: 

                1592    1553     926     901     699     366     262     231
                 197
 
SnaBI TAC'GTA

Cuts at:    493    3553    4518     493 
   Size:       3060     965    2702

  Fragments arranged by size: 

                3060    2702     965
 
SpeI A'CTAG_T

Cuts at:    152     152 
   Size:       6727
 
SphI G_CATG'C

Cuts at:   1132    2654    4085    1132 
   Size:       1522    1431    3774

  Fragments arranged by size: 

                3774    1522    1431
 
SspI AAT'ATT

Cuts at:      5      52    4651       5 
   Size:         47    4599    2081

  Fragments arranged by size: 

                4599    2081      47
 
StuI AGG'CCT

Cuts at:   1517    1517 
   Size:       6727
 
StyI C'CwwG_G

Cuts at:    513    1065    2004    2088    2316    2990    3291    3453    3531 
   Size:        552     939      84     228     674     301     162      78

Cuts at:   3531    3579    3645    4166     513 
   Size:         48      66     521    3074

  Fragments arranged by size: 

                3074     939     674     552     521     301     228     162
                  84      78      66      48
 
TaqII GACCGAnnnnnnnnn_nn'

Cuts at:    325    1580    3019    4754    4771    4924    5109    5554     325 
   Size:       1255    1439    1735      17     153     185     445    1498

  Fragments arranged by size: 

                1735    1498    1439    1255     445     185     153      17
            
 
TatI w'GTAC_w

Cuts at:     96     370     450     483     534    1977    4973    6685      96 
   Size:        274      80      33      51    1443    2996    1712     138

  Fragments arranged by size: 

                2996    1712    1443     274     138      80      51      33
            
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:   6687    6719    6687 
   Size:         32    6695
 
Tth111I GACn'n_nGTC

Cuts at:   1316    1316 
   Size:       6727
 
XbaI T'CTAG_A

Cuts at:   4063    4063 
   Size:       6727
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:   2086    2440    2086 
   Size:        354    6373
 
XhoI C'TCGA_G

Cuts at:   1943    1943 
   Size:       6727
 
XmaI C'CCGG_G

Cuts at:   1870    3759    4052    1870 
   Size:       1889     293    4545

  Fragments arranged by size: 

                4545    1889     293
 
XmnI GAAnn'nnTTC

Cuts at:   4856    4856 
   Size:       6727
 
ZraI GAC'GTC

Cuts at:    276     329     412     598    1534    4535     276 
   Size:         53      83     186     936    3001    2468

  Fragments arranged by size: 

                3001    2468     936     186      83      53
 

 Enzymes that do cut:

     AarI    AatII     AccI   Acc65I     AclI     AcuI    AflII   AflIII
     AgeI     AhdI     AleI     AlfI     AloI    AlwNI     ApaI    ApaLI
     ApoI     AseI    AsiSI     AvaI    BamHI     BanI    BanII     BbeI
     BbsI     BcgI    BciVI     BclI     BglI    BglII     BlpI Bme1580I
    BmgBI     BmrI     BmtI     BpmI   Bpu10I    BpuEI     BsaI    BsaAI
    BsaBI    BsaHI    BsaWI    BsaXI    BseRI    BseYI     BsgI    BsiEI
  BsiHKAI     BsmI    BsmBI Bsp1286I    BspEI    BspHI    BspMI    BsrBI
    BsrDI    BsrFI    BsrGI   BssHII    BssSI   BstAPI    BstBI   BstEII
    BstXI    BstYI     BtgI    BtgZI     BtsI     ClaI    CspCI     DraI
     DrdI     EaeI     EagI     EarI     EciI  EcoICRI  Eco57MI    EcoNI
 EcoO109I    EcoRI    EcoRV     FalI     FspI    FspAI    HaeII    Hin4I
   HincII  HindIII     HpaI     KasI     KpnI     MfeI     MluI     MmeI
     MscI     MslI   MspA1I     NarI     NcoI     NdeI     NheI     NotI
     NspI     PasI     PciI    PflMI     PfoI     PmeI     PmlI     PpiI
    PpuMI    PshAI     PsiI   PspOMI     PstI     PvuI    PvuII     SacI
    SacII     SalI     SapI     SbfI     ScaI     SfcI     SfoI     SgfI
    SgrAI     SmaI     SmlI    SnaBI     SpeI     SphI     SspI     StuI
     StyI    TaqII     TatI     TstI  Tth111I     XbaI     XcmI     XhoI
     XmaI     XmnI     ZraI

 Enzymes that do not cut: 

     AfeI     AscI    AvrII     BaeI    BbvCI    BfrBI     BplI    BsiWI
  BstZ17I   Bsu36I   DraIII     FseI     NaeI   NgoMIV     NruI     NsiI
     PacI    PspXI     PsrI    RsrII    SanDI    SexAI     SfiI     SrfI
     SwaI
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