################################## # NO CUT ENZYMES ( 71 enzymes) # ################################## AatII Acc65I AclI AflII AflIII AgeI Alw44I AlwNI AocI ApaI ApaLI AscI AseI AsnI Asp718I AspI AviII BciVI BfrI BglI BsiWI BsmBI BspDI BspLU11I BsrFI BssHII Bst1107I BstAPI BstEII BstPI BstZ17I Bsu36I Cfr10I ClaI CpoI DraI DrdI Eco81I EcoO65I EcoRV FseI FspI KpnI KspI MluI NaeI NgoMIV NotI NruI PacI PaeR7I PflFI PinAI PmeI PshAI PshBI Psp1406I PvuI RsrII SacII SalI SbfI SfiI SgrAI SnaBI SpeI Sse8387I SspI SwaI Tth111I XhoI ################################### # ONE CUT ENZYMES ( 61 enzymes) # ################################### AccI 222 GTCTAC GT^[AC][GT]AC AccII 1681 CGCG CG^CG AccIII 1733 TCCGGA T^CCGGA AhdI 4056 GACTCCAGGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC Aor51HI 14 AGCGCT AGC^GCT AspEI 4056 GACTCCAGGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AvaI 2147 CCCGGG C^[CT]CG[GA]G AvrII 2802 CCTAGG C^CTAGG BamHI 3495 GGATCC G^GATCC BbeI 1505 GGCGCC GGCGC^C BbrPI 2000 CACGTG CAC^GTG BbvCI 4144 CCTCAGC CCTCAGC(-5/-2) BcgI 1470 CGATGTCCTTGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BclI 3935 TGATCA T^GATCA BglII 2727 AGATCT A^GATCT BlnI 2802 CCTAGG C^CTAGG BsaBI 3376 GATGAGAATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC BsaI 793 GAGACC GGTCTC(1/5) BsaWI 1733 TCCGGA [AT]^CCGG[AT] BseAI 1733 TCCGGA T^CCGGA BsiEI 3867 CGGCCG CG[GA][CT]^CG BsmI 3733 GCATTC GAATGC(1/-1) BsoBI 2147 CCCGGG C^[CT]CG[GA]G Bsp1407I 3436 TGTACA T^GTACA BspEI 1733 TCCGGA T^CCGGA BsrGI 3436 TGTACA T^GTACA BssSI 1493 CTCGTG CACGAG(-5/-1) BstUI 1681 CGCG CG^CG BstXI 3632 CCATCCAAGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG DraII 3296 AGGACCT [GA]G^G[ACGT]CC[CT] DraIII 3266 CACAAGGTG CAC[ACGT][ACGT][ACGT]^GTG EagI 3867 CGGCCG C^GGCCG Eam1105I 4056 GACTCCAGGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EclXI 3867 CGGCCG C^GGCCG Eco47III 14 AGCGCT AGC^GCT Eco52I 3867 CGGCCG C^GGCCG EcoNI 3795 CCTTCATGAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG EcoO109I 3296 AGGACCT [GA]G^G[ACGT]CC[CT] EcoT22I 1576 ATGCAT ATGCA^T FauI 718 CCCGC CCCGC(4/6) FbaI 3935 TGATCA T^GATCA HpaI 1344 GTTAAC GTT^AAC KasI 1505 GGCGCC G^GCGCC MamI 3376 GATGAGAATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC MroI 1733 TCCGGA T^CCGGA MvnI 1681 CGCG CG^CG NarI 1505 GGCGCC GG^CGCC NdeI 3550 CATATG CA^TATG NheI 1278 GCTAGC G^CTAGC NsiI 1576 ATGCAT ATGCA^T PmaCI 2000 CACGTG CAC^GTG PmlI 2000 CACGTG CAC^GTG PpuMI 3296 AGGACCT [GA]G^G[AT]CC[CT] SexAI 3848 ACCAGGT A^CC[AT]GGT SfoI 1505 GGCGCC GGC^GCC SmaI 2147 CCCGGG CCC^GGG SphI 3408 GCATGC GCATG^C SspBI 3436 TGTACA T^GTACA XcmI 3749 CCAGCTCCCTGCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XmaCI 2147 CCCGGG C^CCGGG XmaI 2147 CCCGGG C^CCGGG ################################### # TWO CUT ENZYMES ( 39 enzymes) # ################################### AcyI 533 GACGCC G[GA]^CG[CT]C 1505 GGCGCC Asp700I 1183 GAAAAATTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 2251 GAAAGTATTC AspHI 293 GAGCTC G[AT]GC[AT]^C 2030 GAGCTC BanII 293 GAGCTC G[GA]GC[CT]^C 2030 GAGCTC BbsI 471 GAAGAC GAAGAC(2/6) 1979 GAAGAC BlpI 2302 GCTGAGC GC^T[ACGT]AGC 2307 GCTAAGC BmyI 293 GAGCTC G[AGT]GC[ACT]^C 2030 GAGCTC Bpu1102I 2302 GCTGAGC GC^T[ACGT]AGC 2307 GCTAAGC BpuAI 471 GAAGAC GAAGAC(2/6) 1979 GAAGAC BsaAI 2000 CACGTG [CT]AC^GT[GA] 3310 TACGTG BsaHI 533 GACGCC G[GA]^CG[CT]C 1505 GGCGCC BseRI 632 CTCCTC GAGGAG(10/8) 55 GAGGAG BsiHKAI 293 GAGCTC G[AT]GC[AT]^C 2030 GAGCTC Bsp1286I 293 GAGCTC G[AGT]GC[ACT]^C 2030 GAGCTC BspMI 1545 ACCTGC ACCTGC(4/8) 2986 ACCTGC BsrBI 2044 GAGCGG CCGCTC(-3/-3) 2587 GAGCGG BstBI 1091 TTCGAA TT^CGAA 2258 TTCGAA BstYI 2727 AGATCT [GA]^GATC[CT] 3495 GGATCC CelII 2302 GCTGAGC GC^T[ACGT]AGC 2307 GCTAAGC CfoI 15 GCGC GCG^C 1506 GCGC HaeII 14 AGCGCT [GA]GCGC^[CT] 1505 GGCGCC HhaI 15 GCGC GCG^C 1506 GCGC Hin1I 533 GACGCC G[GA]^CG[CT]C 1505 GGCGCC HinP1I 15 GCGC G^CGC 1506 GCGC MfeI 1613 CAATTG C^AATTG 1829 CAATTG MflI 2727 AGATCT [GA]^GATC[CT] 3495 GGATCC MspA1I 2192 CAGCTG C[AC]G^C[GT]G 3512 CAGCTG MunI 1613 CAATTG C^AATTG 1829 CAATTG NspV 1091 TTCGAA TT^CGAA 2258 TTCGAA PflMI 1457 CCATGGACTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1558 CCAGGGCATGG PvuII 2192 CAGCTG CAG^CTG 3512 CAGCTG SacI 293 GAGCTC GAGCT^C 2030 GAGCTC ScaI 193 AGTACT AGT^ACT 3942 AGTACT SfuI 1091 TTCGAA TT^CGAA 2258 TTCGAA SmlI 2239 CTCAAG C^T[CT][GA]AG 4123 CTTGAG Van91I 1457 CCATGGACTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1558 CCAGGGCATGG XbaI 1290 TCTAGA T^CTAGA 2034 TCTAGA XhoII 2727 AGATCT [GA]^GATC[CT] 3495 GGATCC XmnI 1183 GAAAAATTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 2251 GAAAGTATTC ######################################### # 3 OR MORE CUT ENZYMES ( 87 enzymes) # ######################################### AciI AcsI AfaI AluI AlwI ApoI AvaII BalI BanI BbvI BcnI BfaI BpmI BsaJI BsgI BsiYI BslI BsmAI BsmFI BspHI BsrDI BsrI BssKI BstF5I BstNI Cac8I Cfr13I DdeI DpnII DsaI EaeI EarI EcoRI EcoRII EcoT14I Fnu4HI FokI HaeIII HapII HgaI HincII HindII HindIII HinfI HpaII HphI ItaI Ksp632I MaeI MaeII MaeIII MboI MboII MluNI MnlI MscI MseI MslI MspI MvaI MwoI NciI NcoI NdeII NlaIII NlaIV NspI PleI PstI RcaI RsaI SapI Sau3AI Sau96I ScrFI SfaNI SfcI StuI StyI TaqI TfiI Tru9I TseI Tsp45I Tsp509I TspRI TthHB8I