Result of FASTA (omim) for
pFN21AA0058
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0058, 168 aa
1>>>pF1KA0058 168 - 168 aa - 168 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6291+/-0.000305; mu= -0.2515+/- 0.019
mean_var=241.4927+/-50.956, 0's: 0 Z-trim(125.4): 17 B-trim: 1902 in 2/59
Lambda= 0.082532
statistics sampled from 49047 (49071) to 49047 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.575), width: 16
Scan time: 6.360
The best scores are: opt bits E(85289)
NP_055579 (OMIM: 607431) DAZ-associated protein 2 ( 168) 1193 153.2 1.8e-37
NP_001129741 (OMIM: 607431) DAZ-associated protein ( 153) 883 116.3 2.2e-26
NP_001129738 (OMIM: 607431) DAZ-associated protein ( 207) 723 97.4 1.5e-20
NP_001129739 (OMIM: 607431) DAZ-associated protein ( 136) 668 90.6 1e-18
NP_001129736 (OMIM: 607431) DAZ-associated protein ( 146) 635 86.7 1.6e-17
NP_001129740 (OMIM: 607431) DAZ-associated protein ( 86) 341 51.5 3.9e-07
>>NP_055579 (OMIM: 607431) DAZ-associated protein 2 isof (168 aa)
initn: 1193 init1: 1193 opt: 1193 Z-score: 793.7 bits: 153.2 E(85289): 1.8e-37
Smith-Waterman score: 1193; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168)
10 20 30 40 50 60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
70 80 90 100 110 120
130 140 150 160
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
130 140 150 160
>>NP_001129741 (OMIM: 607431) DAZ-associated protein 2 i (153 aa)
initn: 883 init1: 883 opt: 883 Z-score: 594.7 bits: 116.3 E(85289): 2.2e-26
Smith-Waterman score: 883; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
70 80 90 100 110 120
130 140 150 160
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
::::::
NP_001 TAGNIPVKEDQDHDREQGEEDNGDNNLERRGKM
130 140 150
>>NP_001129738 (OMIM: 607431) DAZ-associated protein 2 i (207 aa)
initn: 723 init1: 723 opt: 723 Z-score: 490.1 bits: 97.4 E(85289): 1.5e-20
Smith-Waterman score: 723; 99.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
::::::::::::::::::::::::::::::::::::::::.::
NP_001 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPASTSWMPSQCCSACSHAGSQ
70 80 90 100 110 120
130 140 150 160
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
NP_001 RPRNSAEGELLHGWFRWWLHHLVRNQGHLCAGKDITYLQHFSQCNCFSHINLKLQFRHML
130 140 150 160 170 180
>>NP_001129739 (OMIM: 607431) DAZ-associated protein 2 i (136 aa)
initn: 653 init1: 653 opt: 668 Z-score: 457.1 bits: 90.6 E(85289): 1e-18
Smith-Waterman score: 903; 81.0% identity (81.0% similar) in 168 aa overlap (1-168:1-136)
10 20 30 40 50 60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE----------------
10 20 30 40
70 80 90 100 110 120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----------------SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
50 60 70 80
130 140 150 160
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
90 100 110 120 130
>>NP_001129736 (OMIM: 607431) DAZ-associated protein 2 i (146 aa)
initn: 636 init1: 596 opt: 635 Z-score: 435.4 bits: 86.7 E(85289): 1.6e-17
Smith-Waterman score: 995; 86.9% identity (86.9% similar) in 168 aa overlap (1-168:1-146)
10 20 30 40 50 60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
:::: ::::::::::::::::::::::::::::::::::
NP_001 MSAA----------------------IPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
70 80 90
130 140 150 160
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
100 110 120 130 140
>>NP_001129740 (OMIM: 607431) DAZ-associated protein 2 i (86 aa)
initn: 394 init1: 341 opt: 341 Z-score: 249.2 bits: 51.5 E(85289): 3.9e-07
Smith-Waterman score: 463; 51.2% identity (51.2% similar) in 168 aa overlap (1-168:1-86)
10 20 30 40 50 60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE----------------
10 20 30 40
70 80 90 100 110 120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
NP_001 ------------------------------------------------------------
130 140 150 160
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
::::::::::::::::::::::::::::::::::::::::::
NP_001 ------PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
50 60 70 80
168 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 19:28:33 2016 done: Thu Nov 3 19:28:34 2016
Total Scan time: 6.360 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]