Result of FASTA (omim) for
pFN21AB5227
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5227, 494 aa
1>>>pF1KB5227 494 - 494 aa - 494 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 16.5186+/-0.000458; mu= -33.0425+/- 0.028
mean_var=756.7353+/-159.661, 0's: 0 Z-trim(125.7): 89 B-trim: 873 in 1/60
Lambda= 0.046623
statistics sampled from 49929 (50057) to 49929 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.836), E-opt: 0.2 (0.587), width: 16
Scan time: 12.360
The best scores are: opt bits E(85289)
XP_016880508 (OMIM: 603428) PREDICTED: BUB3-intera ( 494) 3561 254.4 5.6e-67
NP_001091977 (OMIM: 603428) BUB3-interacting and G ( 494) 3561 254.4 5.6e-67
XP_011523487 (OMIM: 603428) PREDICTED: BUB3-intera ( 440) 3140 226.0 1.7e-58
NP_003448 (OMIM: 603428) BUB3-interacting and GLEB ( 478) 2232 164.9 4.5e-40
NP_001027464 (OMIM: 603428) BUB3-interacting and G ( 463) 2142 158.9 2.9e-38
XP_016880509 (OMIM: 603428) PREDICTED: BUB3-intera ( 447) 1554 119.3 2.3e-26
NP_006239 (OMIM: 168810) basic salivary proline-ri ( 416) 427 43.5 0.0014
>>XP_016880508 (OMIM: 603428) PREDICTED: BUB3-interactin (494 aa)
initn: 3561 init1: 3561 opt: 3561 Z-score: 1323.4 bits: 254.4 E(85289): 5.6e-67
Smith-Waterman score: 3561; 100.0% identity (100.0% similar) in 494 aa overlap (1-494:1-494)
10 20 30 40 50 60
pF1KB5 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
430 440 450 460 470 480
490
pF1KB5 MGMRPPVMSQGGRY
::::::::::::::
XP_016 MGMRPPVMSQGGRY
490
>>NP_001091977 (OMIM: 603428) BUB3-interacting and GLEBS (494 aa)
initn: 3561 init1: 3561 opt: 3561 Z-score: 1323.4 bits: 254.4 E(85289): 5.6e-67
Smith-Waterman score: 3561; 100.0% identity (100.0% similar) in 494 aa overlap (1-494:1-494)
10 20 30 40 50 60
pF1KB5 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
430 440 450 460 470 480
490
pF1KB5 MGMRPPVMSQGGRY
::::::::::::::
NP_001 MGMRPPVMSQGGRY
490
>>XP_011523487 (OMIM: 603428) PREDICTED: BUB3-interactin (440 aa)
initn: 3140 init1: 3140 opt: 3140 Z-score: 1171.1 bits: 226.0 E(85289): 1.7e-58
Smith-Waterman score: 3140; 100.0% identity (100.0% similar) in 440 aa overlap (55-494:1-440)
30 40 50 60 70 80
pF1KB5 ILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEG
::::::::::::::::::::::::::::::
XP_011 MQVHKETIDAVPNAIPGRTDIELEIYGMEG
10 20 30
90 100 110 120 130 140
pF1KB5 IPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB5 PGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPM
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB5 GGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQP
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB5 PVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLN
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 STPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDE
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 DISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQY
340 350 360 370 380 390
450 460 470 480 490
pF1KB5 GGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY
400 410 420 430 440
>>NP_003448 (OMIM: 603428) BUB3-interacting and GLEBS mo (478 aa)
initn: 2088 init1: 2088 opt: 2232 Z-score: 840.5 bits: 164.9 E(85289): 4.5e-40
Smith-Waterman score: 3402; 96.8% identity (96.8% similar) in 494 aa overlap (1-494:1-478)
10 20 30 40 50 60
pF1KB5 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
:::: ::::::::::::::::::::::::::::::::::::::::
NP_003 MPPG----------------MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
190 200 210 220
250 260 270 280 290 300
pF1KB5 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
410 420 430 440 450 460
490
pF1KB5 MGMRPPVMSQGGRY
::::::::::::::
NP_003 MGMRPPVMSQGGRY
470
>>NP_001027464 (OMIM: 603428) BUB3-interacting and GLEBS (463 aa)
initn: 2047 init1: 2047 opt: 2142 Z-score: 808.0 bits: 158.9 E(85289): 2.9e-38
Smith-Waterman score: 3310; 93.7% identity (93.7% similar) in 494 aa overlap (1-494:1-463)
10 20 30 40 50 60
pF1KB5 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
::::::::::::::::::::::::::::::::::::
NP_001 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQ------------------------
250 260 270
310 320 330 340 350 360
pF1KB5 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -------AQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
280 290 300 310 320
370 380 390 400 410 420
pF1KB5 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB5 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
390 400 410 420 430 440
490
pF1KB5 MGMRPPVMSQGGRY
::::::::::::::
NP_001 MGMRPPVMSQGGRY
450 460
>>XP_016880509 (OMIM: 603428) PREDICTED: BUB3-interactin (447 aa)
initn: 1968 init1: 1430 opt: 1554 Z-score: 594.4 bits: 119.3 E(85289): 2.3e-26
Smith-Waterman score: 3151; 90.5% identity (90.5% similar) in 494 aa overlap (1-494:1-447)
10 20 30 40 50 60
pF1KB5 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
:::: ::::::::::::::::::::::::::::::::::::::::
XP_016 MPPG----------------MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
190 200 210 220
250 260 270 280 290 300
pF1KB5 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
::::::::::::::::::::::::::::::::::::
XP_016 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQ------------------------
230 240 250 260
310 320 330 340 350 360
pF1KB5 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -------AQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
270 280 290 300 310
370 380 390 400 410 420
pF1KB5 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB5 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
380 390 400 410 420 430
490
pF1KB5 MGMRPPVMSQGGRY
::::::::::::::
XP_016 MGMRPPVMSQGGRY
440
>>NP_006239 (OMIM: 168810) basic salivary proline-rich p (416 aa)
initn: 157 init1: 157 opt: 427 Z-score: 185.2 bits: 43.5 E(85289): 0.0014
Smith-Waterman score: 474; 29.4% identity (48.4% similar) in 415 aa overlap (110-485:17-411)
80 90 100 110 120 130
pF1KB5 YGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYI
:. ... ....: . . .:: . :: :
NP_006 MLLILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNK
10 20 30 40
140 150 160 170 180
pF1KB5 P--PMAQPGLP--PVPGAPGMP--PGIPPLMPGVPPLMPGM------PPVMPGMPPGLHH
: : . :: : : : . ..: : :: : :: . : :: : ::
NP_006 PQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD
50 60 70 80 90 100
190 200 210 220 230
pF1KB5 QRKYTQSFCGE-NIMMPMGGMMPPGPGIPPLMPGMPPGM-------PPPVPRP-GIPPMT
. . .: :. . :.:: .: :: :: : :: . ::: .: : ::.
NP_006 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG
110 120 130 140 150 160
240 250 260 270 280
pF1KB5 QAQAVSA---PGILNRPPAPTATVP-APQPPVTKPLFP--SAGQ--MGTPVTSSSTA---
. .. :. :: . :: .. : .: :: :: : ..:. .: : .. .
NP_006 DNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP
170 180 190 200 210 220
290 300 310 320 330 340
pF1KB5 SSNSESLSASSKALFPSTAQAQAAVQ--GPVGTDFKPLNSTPATTTEPPKPTFPAYTQST
.....: :: : :. :.. : :: :: . : ..: : :. :.
NP_006 QGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP
230 240 250 260 270 280
350 360 370 380 390 400
pF1KB5 ASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRP
.. . .. .: . :: .... : . : : :.
NP_006 PPQGGSKSRSSRSPPG----KPQGPPPQGGNQPQGPPPPP-----GKPQGPP-----PQG
290 300 310 320 330
410 420 430 440 450 460
pF1KB5 GQAPIGNPPVG-PIGGMMPPQPGIPQQQGMRPPMPPHG---QYGGHHQGMPGYLP-GAMP
:. : : :: : : : ::: : .... :: :.: : :.. :: : : :. :
NP_006 GNKPQGPPPPGKPQGP--PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPP--PAGGNP
340 350 360 370 380
470 480 490
pF1KB5 PYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY
:.:: : ::::::.: ::
NP_006 QQPQAPPAGQPQ--GPPRPPQGGRPSRPPQ
390 400 410
494 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:22:52 2016 done: Thu Nov 3 16:22:54 2016
Total Scan time: 12.360 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]