Result of FASTA (omim) for
pFN21AB5205
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5205, 543 aa
1>>>pF1KB5205 543 - 543 aa - 543 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1992+/-0.000483; mu= 19.1557+/- 0.030
mean_var=69.0806+/-14.127, 0's: 0 Z-trim(107.9): 61 B-trim: 29 in 1/50
Lambda= 0.154311
statistics sampled from 15963 (16016) to 15963 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.533), E-opt: 0.2 (0.188), width: 16
Scan time: 9.500
The best scores are: opt bits E(85289)
NP_006420 (OMIM: 605140) T-complex protein 1 subun ( 543) 3495 787.9 0
NP_001159757 (OMIM: 605140) T-complex protein 1 su ( 499) 3213 725.1 1.2e-208
XP_011530780 (OMIM: 605140) PREDICTED: T-complex p ( 499) 3213 725.1 1.2e-208
XP_011530781 (OMIM: 605140) PREDICTED: T-complex p ( 499) 3213 725.1 1.2e-208
NP_001159756 (OMIM: 605140) T-complex protein 1 su ( 456) 2937 663.7 3.5e-190
NP_001009570 (OMIM: 605140) T-complex protein 1 su ( 339) 2226 505.3 1.2e-142
NP_006422 (OMIM: 605139) T-complex protein 1 subun ( 535) 1012 235.2 4e-61
NP_006421 (OMIM: 605142) T-complex protein 1 subun ( 539) 1005 233.6 1.2e-60
NP_005989 (OMIM: 600114) T-complex protein 1 subun ( 545) 987 229.6 1.9e-59
NP_001185771 (OMIM: 605139) T-complex protein 1 su ( 488) 934 217.8 6.3e-56
NP_110379 (OMIM: 186980) T-complex protein 1 subun ( 556) 903 210.9 8.4e-54
NP_036205 (OMIM: 256840,610150) T-complex protein ( 541) 895 209.1 2.8e-53
NP_001293082 (OMIM: 256840,610150) T-complex prote ( 520) 883 206.4 1.7e-52
NP_001293085 (OMIM: 256840,610150) T-complex prote ( 503) 866 202.6 2.3e-51
NP_001008800 (OMIM: 600114) T-complex protein 1 su ( 507) 832 195.1 4.5e-49
NP_001243650 (OMIM: 605142) T-complex protein 1 su ( 509) 762 179.5 2.2e-44
NP_001753 (OMIM: 104613) T-complex protein 1 subun ( 531) 716 169.3 2.8e-41
NP_006575 (OMIM: 610730) T-complex protein 1 subun ( 530) 675 160.1 1.5e-38
NP_001293083 (OMIM: 256840,610150) T-complex prote ( 486) 599 143.2 1.8e-33
NP_001293084 (OMIM: 256840,610150) T-complex prote ( 448) 595 142.3 3.1e-33
NP_001008897 (OMIM: 186980) T-complex protein 1 su ( 401) 580 138.9 2.9e-32
XP_016879512 (OMIM: 610730) PREDICTED: T-complex p ( 464) 566 135.8 2.8e-31
NP_001009186 (OMIM: 104613) T-complex protein 1 su ( 486) 481 116.9 1.4e-25
NP_001180459 (OMIM: 610730) T-complex protein 1 su ( 485) 446 109.1 3.2e-23
XP_016879513 (OMIM: 610730) PREDICTED: T-complex p ( 351) 404 99.7 1.6e-20
XP_011522505 (OMIM: 610730) PREDICTED: T-complex p ( 388) 404 99.7 1.7e-20
NP_001180458 (OMIM: 610730) T-complex protein 1 su ( 493) 404 99.8 2.1e-20
NP_955472 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 198 54.0 1.5e-06
NP_002147 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 198 54.0 1.5e-06
XP_011509094 (OMIM: 121850,609414) PREDICTED: 1-ph (1340) 194 53.3 5.6e-06
XP_011509092 (OMIM: 121850,609414) PREDICTED: 1-ph (1779) 194 53.4 7e-06
XP_016859061 (OMIM: 121850,609414) PREDICTED: 1-ph (1779) 194 53.4 7e-06
XP_016859062 (OMIM: 121850,609414) PREDICTED: 1-ph (1779) 194 53.4 7e-06
XP_016859063 (OMIM: 121850,609414) PREDICTED: 1-ph (1779) 194 53.4 7e-06
XP_011509091 (OMIM: 121850,609414) PREDICTED: 1-ph (1951) 194 53.4 7.5e-06
XP_011509090 (OMIM: 121850,609414) PREDICTED: 1-ph (2001) 194 53.4 7.7e-06
XP_011509089 (OMIM: 121850,609414) PREDICTED: 1-ph (2012) 194 53.4 7.7e-06
XP_011509088 (OMIM: 121850,609414) PREDICTED: 1-ph (2013) 194 53.4 7.7e-06
XP_011509084 (OMIM: 121850,609414) PREDICTED: 1-ph (2055) 194 53.4 7.8e-06
XP_016859057 (OMIM: 121850,609414) PREDICTED: 1-ph (2092) 194 53.4 8e-06
NP_055855 (OMIM: 121850,609414) 1-phosphatidylinos (2098) 194 53.4 8e-06
XP_011509083 (OMIM: 121850,609414) PREDICTED: 1-ph (2104) 194 53.4 8e-06
XP_011509082 (OMIM: 121850,609414) PREDICTED: 1-ph (2109) 194 53.4 8e-06
XP_011509081 (OMIM: 121850,609414) PREDICTED: 1-ph (2110) 194 53.4 8e-06
XP_011509080 (OMIM: 121850,609414) PREDICTED: 1-ph (2110) 194 53.4 8e-06
XP_016859060 (OMIM: 121850,609414) PREDICTED: 1-ph (1895) 193 53.2 8.6e-06
XP_016859059 (OMIM: 121850,609414) PREDICTED: 1-ph (1945) 193 53.2 8.8e-06
XP_011509086 (OMIM: 121850,609414) PREDICTED: 1-ph (2053) 193 53.2 9.1e-06
XP_011509085 (OMIM: 121850,609414) PREDICTED: 1-ph (2054) 193 53.2 9.1e-06
XP_016859058 (OMIM: 121850,609414) PREDICTED: 1-ph (2036) 189 52.3 1.7e-05
>>NP_006420 (OMIM: 605140) T-complex protein 1 subunit e (543 aa)
initn: 3495 init1: 3495 opt: 3495 Z-score: 4205.6 bits: 787.9 E(85289): 0
Smith-Waterman score: 3495; 100.0% identity (100.0% similar) in 543 aa overlap (1-543:1-543)
10 20 30 40 50 60
pF1KB5 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDIN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 NEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRG
490 500 510 520 530 540
pF1KB5 RPH
:::
NP_006 RPH
>>NP_001159757 (OMIM: 605140) T-complex protein 1 subuni (499 aa)
initn: 3213 init1: 3213 opt: 3213 Z-score: 3866.9 bits: 725.1 E(85289): 1.2e-208
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 499 aa overlap (45-543:1-499)
20 30 40 50 60 70
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP
::::::::::::::::::::::::::::::
NP_001 MDKLIVDGRGKATISNDGATILKLLDVVHP
10 20 30
80 90 100 110 120 130
pF1KB5 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB5 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB5 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
400 410 420 430 440 450
500 510 520 530 540
pF1KB5 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
460 470 480 490
>>XP_011530780 (OMIM: 605140) PREDICTED: T-complex prote (499 aa)
initn: 3213 init1: 3213 opt: 3213 Z-score: 3866.9 bits: 725.1 E(85289): 1.2e-208
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 499 aa overlap (45-543:1-499)
20 30 40 50 60 70
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP
::::::::::::::::::::::::::::::
XP_011 MDKLIVDGRGKATISNDGATILKLLDVVHP
10 20 30
80 90 100 110 120 130
pF1KB5 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB5 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB5 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
400 410 420 430 440 450
500 510 520 530 540
pF1KB5 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
460 470 480 490
>>XP_011530781 (OMIM: 605140) PREDICTED: T-complex prote (499 aa)
initn: 3213 init1: 3213 opt: 3213 Z-score: 3866.9 bits: 725.1 E(85289): 1.2e-208
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 499 aa overlap (45-543:1-499)
20 30 40 50 60 70
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP
::::::::::::::::::::::::::::::
XP_011 MDKLIVDGRGKATISNDGATILKLLDVVHP
10 20 30
80 90 100 110 120 130
pF1KB5 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB5 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB5 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
400 410 420 430 440 450
500 510 520 530 540
pF1KB5 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
460 470 480 490
>>NP_001159756 (OMIM: 605140) T-complex protein 1 subuni (456 aa)
initn: 2937 init1: 2937 opt: 2937 Z-score: 3535.4 bits: 663.7 E(85289): 3.5e-190
Smith-Waterman score: 2937; 100.0% identity (100.0% similar) in 454 aa overlap (90-543:3-456)
60 70 80 90 100 110
pF1KB5 NDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQ
::::::::::::::::::::::::::::::
NP_001 MMVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQ
10 20 30
120 130 140 150 160 170
pF1KB5 IIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMV
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 VDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIAL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 LNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVA
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 TQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYN
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB5 FFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKY
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB5 LRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDI
340 350 360 370 380 390
480 490 500 510 520 530
pF1KB5 NNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGR
400 410 420 430 440 450
540
pF1KB5 GRPH
::::
NP_001 GRPH
>>NP_001009570 (OMIM: 605140) T-complex protein 1 subuni (339 aa)
initn: 2226 init1: 2226 opt: 2226 Z-score: 2681.8 bits: 505.3 E(85289): 1.2e-142
Smith-Waterman score: 2226; 99.4% identity (99.7% similar) in 339 aa overlap (205-543:1-339)
180 190 200 210 220 230
pF1KB5 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHN
. ::::::::::::::::::::::::::::
NP_001 MMDSQLVAGVAFKKTFSYAGFEMQPKKYHN
10 20 30
240 250 260 270 280 290
pF1KB5 PKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLP
40 50 60 70 80 90
300 310 320 330 340 350
pF1KB5 IGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIG
100 110 120 130 140 150
360 370 380 390 400 410
pF1KB5 GERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM
160 170 180 190 200 210
420 430 440 450 460 470
pF1KB5 ELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTW
220 230 240 250 260 270
480 490 500 510 520 530
pF1KB5 YGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAG
280 290 300 310 320 330
540
pF1KB5 RGRGRGRPH
:::::::::
NP_001 RGRGRGRPH
>>NP_006422 (OMIM: 605139) T-complex protein 1 subunit b (535 aa)
initn: 897 init1: 455 opt: 1012 Z-score: 1218.3 bits: 235.2 E(85289): 4e-61
Smith-Waterman score: 1012; 35.6% identity (67.2% similar) in 528 aa overlap (5-527:8-529)
10 20 30 40 50
pF1KB5 MMPTPVILLKEGTDSSQG-IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVD-GRGK
:: ..: :.: .. .:.: :.: .:.. :..::::.::::.... ::
NP_006 MASLSLAPVNIFKAGADEERAETARLTSFIGAI-AIGDLVKSTLGPKGMDKILLSSGRDA
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 AT-ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEE
. ..:::::::: . : .::::.:::... :: ::::::::::.::::.:.... . .
NP_006 SLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 GLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAF
.::: :: ..: ::. : . . :: . .:.:. :. : . : :.:::::....:
NP_006 KIHPQTIIAGWREATKAAREALLSSAVD-HGSDEVKFRQDLMNIAGTTLSSKLLTHHKDH
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHN
:.:..:.::. : .:. : : : ::.: :: : : . : .. :::. .:
NP_006 FTKLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIEN
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 PKIALLNVELEL-KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKL
:: . :. .. : . ....:: .. : :: . . .:.:.: . : . ...
NP_006 AKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 PIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQI
: . : :. .. .. ..: .. :: : .. . :: :...::..:
NP_006 LIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMI
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 GGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIE
: .. :.: ...::..:::...:...:.:::::::. .. ...:.. .: ::: :
NP_006 GEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSE
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 MELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT
: ... . . . :::. . . .:::::...: . ::::.:..... .::: :..:.:
NP_006 MLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNT
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB5 WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKN-PRSTVDAPTA
:.:. . :.: . : .:. ..: .:.::: .:. ::. :: ::. :
NP_006 TAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHHP
480 490 500 510 520 530
540
pF1KB5 AGRGRGRGRPH
NP_006 C
>>NP_006421 (OMIM: 605142) T-complex protein 1 subunit d (539 aa)
initn: 830 init1: 413 opt: 1005 Z-score: 1209.8 bits: 233.6 E(85289): 1.2e-60
Smith-Waterman score: 1005; 34.4% identity (68.9% similar) in 514 aa overlap (24-524:36-539)
10 20 30 40 50
pF1KB5 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGR
::::: ...:.:.::.:::.::::.: ::.
NP_006 APRSGATAGAAGGRGKGAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 GKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVE
: .::.:::::::: ..:.::::. ::...:.:: :.:::::::...:. .: . ..
NP_006 GDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 EGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKA
.:.:: :: ..:. : . ... . ... :. .: :. : . : :.:.::..:: ..
NP_006 KGIHPTIISESFQKALEKGIEILTDMSRPVELSD----RETLLNSATTSLNSKVVSQYSS
130 140 150 160 170 180
180 190 200 210 220
pF1KB5 FFAKMVVDAVMMLDD-----LLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQ
... : :.::: . : ..:. : : : ::...: .:: :... . : .:.
NP_006 LLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGIT--
190 200 210 220 230
230 240 250 260 270 280
pF1KB5 PKKYHNPKIALLNVELEL-KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAK
. .. ::.:.. : :.. :: .: : ... .. : . . ...:...: .
NP_006 --RVEKAKIGLIQFCLSAPKTDMDN-QIVVSDYAQMDRVLREERAYILNLVKQIKKTGCN
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 VVLSKLPI-----GDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVL
:.: . : .:.: ... .. . .::.. . : . . .. ..::.:
NP_006 VLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADML
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 GRCQVFEETQIGGE-RYNFFTGCPK-AKTCTFILRGGAEQFMEETERSLHDAIMIVRRAI
: .. ::....: . .::: . .:: :...::. . .::.:::.:::. ..: .
NP_006 GSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLV
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB5 KNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNI
:. ...::::: :.::. : .::::. : .. . :.: :.:.:: : .:::.. .
NP_006 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPIST
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB5 LNKLRARHAQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI
...:: ::::: :... . :.. .: .: .: .: ..::: :.:.. :...:...
NP_006 VTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV
480 490 500 510 520 530
530 540
pF1KB5 KNPRSTVDAPTAAGRGRGRGRPH
: :
NP_006 -NTR
>>NP_005989 (OMIM: 600114) T-complex protein 1 subunit g (545 aa)
initn: 872 init1: 492 opt: 987 Z-score: 1188.1 bits: 229.6 E(85289): 1.9e-59
Smith-Waterman score: 987; 31.7% identity (66.1% similar) in 545 aa overlap (1-534:2-537)
10 20 30 40 50
pF1KB5 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATIS
: ::..:...: .: .::.: ..::. .:: :::..: :...: : ...
NP_005 MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 NDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQ
::: .::. ..: :::::....:...:: ::::::::: .::.:.:. .. ..:. .::
NP_005 NDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 IIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMV
..: :.: : . .. .:.:.. : .:. .. . .....: ::. ... ...
NP_005 VVISAYRKALDDMISTLKKISIPVDISDS----DMMLNIINSSITTKAISRWSSLACNIA
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 VDAVMMLD-------DLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKY
.::: :.. .. :. ..:. :: .::: .. :: ..: .. . ..:
NP_005 LDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP----RMRRY
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -HNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLS
.::.:.::. :: : .....:.. ::. :.. : . . . : : . ::..
NP_005 IKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVIT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGR-CQVFEE
. :.:.: .:. .. :: . : .: :::. : . . : : .: ..:
NP_005 EKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEI
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 TQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG
.:: : ..:.: : :.::..:::...... :.::.:.::... : .. . ..: :::
NP_005 KKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGG
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 AIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQ
: :: ... : . :... : .: : :.:::.::: : .: : .. .:..:::.:.:
NP_005 ASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ
420 430 440 450 460 470
480 490 500 510 520
pF1KB5 GG--TWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVD
. :: ::. .. ..: : .::: :.... .: :.: :.. .:. ... .. :
NP_005 ENCETW-GVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGD
480 490 500 510 520 530
530 540
pF1KB5 APTAAGRGRGRGRPH
. :
NP_005 DQSRQGGAPDAGQE
540
>>NP_001185771 (OMIM: 605139) T-complex protein 1 subuni (488 aa)
initn: 846 init1: 455 opt: 934 Z-score: 1125.0 bits: 217.8 E(85289): 6.3e-56
Smith-Waterman score: 934; 35.3% identity (66.7% similar) in 487 aa overlap (45-527:1-482)
20 30 40 50 60 70
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVD-GRGKAT-ISNDGATILKLLDVV
:::.... :: . ..:::::::: . :
NP_001 MDKILLSSGRDASLMVTNDGATILKNIGVD
10 20 30
80 90 100 110 120 130
pF1KB5 HPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLA
.::::.:::... :: ::::::::::.::::.:.... . . .::: :: ..: ::. :
NP_001 NPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAA
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 VNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQL
. . :: . .:.:. :. : . : :.:::::....: :.:..:.::. : .:
NP_001 REALLSSAVD-HGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNL
100 110 120 130 140
200 210 220 230 240 250
pF1KB5 KMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELEL-KAEKD
. : : : ::.: :: : : . : .. :::. .: :: . :. .. : .
NP_001 EAIHIIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIENAKILIANTGMDTDKIKIF
150 160 170 180 190 200
260 270 280 290 300 310
pF1KB5 NAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCA
....:: .. : :: . . .:.:.: . : . ... : . : :. ..
NP_001 GSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAI
210 220 230 240 250 260
320 330 340 350 360 370
pF1KB5 GRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCT
.. ..: .. :: : .. . :: :...::..:: .. :.: ...::
NP_001 EHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACT
270 280 290 300 310 320
380 390 400 410 420 430
pF1KB5 FILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQ
..:::...:...:.:::::::. .. ...:.. .: ::: :: ... . . . :::.
NP_001 IVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKE
330 340 350 360 370 380
440 450 460 470 480 490
pF1KB5 QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAF
. . .:::::...: . ::::.:..... .::: :..:.: :.:. . :.:
NP_001 AVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDMREGTIGDMAILG
390 400 410 420 430 440
500 510 520 530 540
pF1KB5 VWEPAMVRINALTAASEAACLIVSVDETIKN-PRSTVDAPTAAGRGRGRGRPH
. : .:. ..: .:.::: .:. ::. :: ::. :
NP_001 ITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHHPC
450 460 470 480
543 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:19:25 2016 done: Thu Nov 3 16:19:26 2016
Total Scan time: 9.500 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]