Result of FASTA (omim) for pFN21AB4391
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4391, 520 aa
  1>>>pF1KB4391 520 - 520 aa - 520 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7345+/-0.000426; mu= 16.5689+/- 0.026
 mean_var=89.9969+/-17.810, 0's: 0 Z-trim(112.8): 288  B-trim: 14 in 1/50
 Lambda= 0.135195
 statistics sampled from 21554 (21863) to 21554 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.256), width:  16
 Scan time:  9.120

The best scores are:                                      opt bits E(85289)
NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 3589 710.6 2.8e-204
XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 3358 665.6 9.8e-191
XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 3358 665.6 9.8e-191
XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 3358 665.6 9.8e-191
XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 2954 586.7 4.6e-167
XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 2954 586.7 4.6e-167
NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 2913 578.8 1.3e-164
XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin c ( 351) 2397 478.0  2e-134
XP_016875500 (OMIM: 610993) PREDICTED: ubiquitin c ( 712)  602 128.1 8.5e-29
NP_001035862 (OMIM: 610993) ubiquitin carboxyl-ter ( 712)  602 128.1 8.5e-29
XP_016875498 (OMIM: 610993) PREDICTED: ubiquitin c ( 712)  602 128.1 8.5e-29
XP_016875499 (OMIM: 610993) PREDICTED: ubiquitin c ( 712)  602 128.1 8.5e-29
NP_115523 (OMIM: 610993) ubiquitin carboxyl-termin ( 712)  602 128.1 8.5e-29
NP_001265322 (OMIM: 610993) ubiquitin carboxyl-ter ( 712)  602 128.1 8.5e-29
XP_016874028 (OMIM: 604725) PREDICTED: ubiquitin c ( 352)  487 105.5 2.8e-22
NP_001230688 (OMIM: 604725) ubiquitin carboxyl-ter ( 362)  487 105.5 2.8e-22
NP_741994 (OMIM: 604725) ubiquitin carboxyl-termin ( 396)  487 105.5   3e-22
XP_005271779 (OMIM: 604725) PREDICTED: ubiquitin c ( 605)  487 105.7 4.2e-22
NP_004196 (OMIM: 604725) ubiquitin carboxyl-termin ( 605)  487 105.7 4.2e-22
XP_005271778 (OMIM: 604725) PREDICTED: ubiquitin c ( 605)  487 105.7 4.2e-22
XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928)  484 105.2 8.8e-22
XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928)  484 105.2 8.8e-22
NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012)  484 105.2 9.4e-22
XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  484 105.3   1e-21
XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  484 105.3   1e-21
XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  484 105.3   1e-21
XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  484 105.3   1e-21
XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118)  484 105.3   1e-21
NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118)  484 105.3   1e-21
NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118)  484 105.3   1e-21
XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118)  484 105.3   1e-21
XP_005269318 (OMIM: 604731) PREDICTED: ubiquitin c ( 648)  479 104.1 1.3e-21
XP_016875774 (OMIM: 604731) PREDICTED: ubiquitin c ( 860)  479 104.2 1.6e-21
XP_016875773 (OMIM: 604731) PREDICTED: ubiquitin c ( 860)  479 104.2 1.6e-21
NP_006304 (OMIM: 604731) ubiquitin carboxyl-termin ( 952)  479 104.2 1.8e-21
NP_001239007 (OMIM: 604731) ubiquitin carboxyl-ter ( 981)  479 104.2 1.8e-21
NP_955475 (OMIM: 603486) ubiquitin carboxyl-termin ( 916)  466 101.7 9.9e-21
NP_003354 (OMIM: 603486) ubiquitin carboxyl-termin ( 963)  466 101.7   1e-20
NP_036607 (OMIM: 604729) ubiquitin carboxyl-termin ( 565)  452 98.8 4.5e-20
NP_001014443 (OMIM: 604729) ubiquitin carboxyl-ter ( 565)  452 98.8 4.5e-20
XP_016856529 (OMIM: 604729) PREDICTED: ubiquitin c ( 594)  452 98.8 4.7e-20
NP_001306776 (OMIM: 604729) ubiquitin carboxyl-ter ( 594)  452 98.8 4.7e-20
XP_016856217 (OMIM: 615146) PREDICTED: ubiquitin c ( 763)  429 94.4 1.3e-18
XP_016856216 (OMIM: 615146) PREDICTED: ubiquitin c ( 763)  429 94.4 1.3e-18
XP_016856213 (OMIM: 615146) PREDICTED: ubiquitin c ( 812)  429 94.4 1.3e-18
XP_016856212 (OMIM: 615146) PREDICTED: ubiquitin c ( 820)  429 94.4 1.4e-18
NP_963920 (OMIM: 615146) ubiquitin carboxyl-termin ( 828)  429 94.4 1.4e-18
XP_005270706 (OMIM: 615146) PREDICTED: ubiquitin c ( 851)  429 94.4 1.4e-18
XP_016856211 (OMIM: 615146) PREDICTED: ubiquitin c ( 903)  429 94.5 1.5e-18
NP_963918 (OMIM: 615146) ubiquitin carboxyl-termin ( 911)  429 94.5 1.5e-18


>>NP_006528 (OMIM: 604728) ubiquitin carboxyl-terminal h  (520 aa)
 initn: 3589 init1: 3589 opt: 3589  Z-score: 3788.5  bits: 710.6 E(85289): 2.8e-204
Smith-Waterman score: 3589; 100.0% identity (100.0% similar) in 520 aa overlap (1-520:1-520)

               10        20        30        40        50        60
pF1KB4 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
              430       440       450       460       470       480

              490       500       510       520
pF1KB4 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       ::::::::::::::::::::::::::::::::::::::::
NP_006 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
              490       500       510       520

>>XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin carbo  (498 aa)
 initn: 3358 init1: 3358 opt: 3358  Z-score: 3545.3  bits: 665.6 E(85289): 9.8e-191
Smith-Waterman score: 3358; 99.8% identity (100.0% similar) in 491 aa overlap (30-520:8-498)

               10        20        30        40        50        60
pF1KB4 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
                                    .::::::::::::::::::::::::::::::
XP_016                       MQSPPHLAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
                                     10        20        30        

               70        80        90       100       110       120
pF1KB4 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       40        50        60        70        80        90        

              130       140       150       160       170       180
pF1KB4 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
      100       110       120       130       140       150        

              190       200       210       220       230       240
pF1KB4 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
      160       170       180       190       200       210        

              250       260       270       280       290       300
pF1KB4 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
      220       230       240       250       260       270        

              310       320       330       340       350       360
pF1KB4 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
      280       290       300       310       320       330        

              370       380       390       400       410       420
pF1KB4 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
      340       350       360       370       380       390        

              430       440       450       460       470       480
pF1KB4 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
      400       410       420       430       440       450        

              490       500       510       520
pF1KB4 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       ::::::::::::::::::::::::::::::::::::::::
XP_016 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
      460       470       480       490        

>>XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin carbo  (498 aa)
 initn: 3358 init1: 3358 opt: 3358  Z-score: 3545.3  bits: 665.6 E(85289): 9.8e-191
Smith-Waterman score: 3358; 99.8% identity (100.0% similar) in 491 aa overlap (30-520:8-498)

               10        20        30        40        50        60
pF1KB4 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
                                    .::::::::::::::::::::::::::::::
XP_016                       MQSPPHLAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
                                     10        20        30        

               70        80        90       100       110       120
pF1KB4 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       40        50        60        70        80        90        

              130       140       150       160       170       180
pF1KB4 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
      100       110       120       130       140       150        

              190       200       210       220       230       240
pF1KB4 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
      160       170       180       190       200       210        

              250       260       270       280       290       300
pF1KB4 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
      220       230       240       250       260       270        

              310       320       330       340       350       360
pF1KB4 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
      280       290       300       310       320       330        

              370       380       390       400       410       420
pF1KB4 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
      340       350       360       370       380       390        

              430       440       450       460       470       480
pF1KB4 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
      400       410       420       430       440       450        

              490       500       510       520
pF1KB4 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       ::::::::::::::::::::::::::::::::::::::::
XP_016 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
      460       470       480       490        

>>XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin carbo  (498 aa)
 initn: 3358 init1: 3358 opt: 3358  Z-score: 3545.3  bits: 665.6 E(85289): 9.8e-191
Smith-Waterman score: 3358; 99.8% identity (100.0% similar) in 491 aa overlap (30-520:8-498)

               10        20        30        40        50        60
pF1KB4 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
                                    .::::::::::::::::::::::::::::::
XP_016                       MQSPPHLAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
                                     10        20        30        

               70        80        90       100       110       120
pF1KB4 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
       40        50        60        70        80        90        

              130       140       150       160       170       180
pF1KB4 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
      100       110       120       130       140       150        

              190       200       210       220       230       240
pF1KB4 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
      160       170       180       190       200       210        

              250       260       270       280       290       300
pF1KB4 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
      220       230       240       250       260       270        

              310       320       330       340       350       360
pF1KB4 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
      280       290       300       310       320       330        

              370       380       390       400       410       420
pF1KB4 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
      340       350       360       370       380       390        

              430       440       450       460       470       480
pF1KB4 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
      400       410       420       430       440       450        

              490       500       510       520
pF1KB4 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       ::::::::::::::::::::::::::::::::::::::::
XP_016 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
      460       470       480       490        

>>XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin carbo  (435 aa)
 initn: 2954 init1: 2954 opt: 2954  Z-score: 3120.3  bits: 586.7 E(85289): 4.6e-167
Smith-Waterman score: 2954; 100.0% identity (100.0% similar) in 435 aa overlap (86-520:1-435)

          60        70        80        90       100       110     
pF1KB4 HAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVR
                                     ::::::::::::::::::::::::::::::
XP_016                               MDCSSYSTYCYRCDDFVVNDTKLGLVQKVR
                                             10        20        30

         120       130       140       150       160       170     
pF1KB4 EHLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQ
               40        50        60        70        80        90

         180       190       200       210       220       230     
pF1KB4 SLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQT
              100       110       120       130       140       150

         240       250       260       270       280       290     
pF1KB4 AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTL
              160       170       180       190       200       210

         300       310       320       330       340       350     
pF1KB4 SASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKN
              220       230       240       250       260       270

         360       370       380       390       400       410     
pF1KB4 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH
              280       290       300       310       320       330

         420       430       440       450       460       470     
pF1KB4 WTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAY
              340       350       360       370       380       390

         480       490       500       510       520
pF1KB4 ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       :::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
              400       410       420       430     

>>XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin carbo  (435 aa)
 initn: 2954 init1: 2954 opt: 2954  Z-score: 3120.3  bits: 586.7 E(85289): 4.6e-167
Smith-Waterman score: 2954; 100.0% identity (100.0% similar) in 435 aa overlap (86-520:1-435)

          60        70        80        90       100       110     
pF1KB4 HAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVR
                                     ::::::::::::::::::::::::::::::
XP_016                               MDCSSYSTYCYRCDDFVVNDTKLGLVQKVR
                                             10        20        30

         120       130       140       150       160       170     
pF1KB4 EHLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQ
               40        50        60        70        80        90

         180       190       200       210       220       230     
pF1KB4 SLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQT
              100       110       120       130       140       150

         240       250       260       270       280       290     
pF1KB4 AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTL
              160       170       180       190       200       210

         300       310       320       330       340       350     
pF1KB4 SASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKN
              220       230       240       250       260       270

         360       370       380       390       400       410     
pF1KB4 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH
              280       290       300       310       320       330

         420       430       440       450       460       470     
pF1KB4 WTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAY
              340       350       360       370       380       390

         480       490       500       510       520
pF1KB4 ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       :::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
              400       410       420       430     

>>NP_001243631 (OMIM: 604728) ubiquitin carboxyl-termina  (476 aa)
 initn: 2913 init1: 2913 opt: 2913  Z-score: 3076.5  bits: 578.8 E(85289): 1.3e-164
Smith-Waterman score: 3170; 91.3% identity (91.3% similar) in 520 aa overlap (1-520:1-476)

               10        20        30        40        50        60
pF1KB4 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKH
       :::::::::::::::::::::::::::::::::::::::::::::::::: :        
NP_001 MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGSY--------
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KB4 YEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQN
                                           ::::::::::::::::::::::::
NP_001 ------------------------------------RCDDFVVNDTKLGLVQKVREHLQN
                                                 60        70      

              130       140       150       160       170       180
pF1KB4 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNI
         80        90       100       110       120       130      

              190       200       210       220       230       240
pF1KB4 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPE
        140       150       160       170       180       190      

              250       260       270       280       290       300
pF1KB4 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNK
        200       210       220       230       240       250      

              310       320       330       340       350       360
pF1KB4 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGP
        260       270       280       290       300       310      

              370       380       390       400       410       420
pF1KB4 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
        320       330       340       350       360       370      

              430       440       450       460       470       480
pF1KB4 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEG
        380       390       400       410       420       430      

              490       500       510       520
pF1KB4 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
       ::::::::::::::::::::::::::::::::::::::::
NP_001 RWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSDKL
        440       450       460       470      

>>XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin carbo  (351 aa)
 initn: 2397 init1: 2397 opt: 2397  Z-score: 2534.4  bits: 478.0 E(85289): 2e-134
Smith-Waterman score: 2397; 100.0% identity (100.0% similar) in 351 aa overlap (170-520:1-351)

     140       150       160       170       180       190         
pF1KB4 STLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGK
                                     ::::::::::::::::::::::::::::::
XP_016                               MNAILQSLSNIEQFCCYFKELPAVELRNGK
                                             10        20        30

     200       210       220       230       240       250         
pF1KB4 TAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQ
               40        50        60        70        80        90

     260       270       280       290       300       310         
pF1KB4 DAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQ
              100       110       120       130       140       150

     320       330       340       350       360       370         
pF1KB4 NEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDE
              160       170       180       190       200       210

     380       390       400       410       420       430         
pF1KB4 TELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKC
              220       230       240       250       260       270

     440       450       460       470       480       490         
pF1KB4 YLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVV
              280       290       300       310       320       330

     500       510       520
pF1KB4 KAKAYILFYVEHQAKAGSDKL
       :::::::::::::::::::::
XP_016 KAKAYILFYVEHQAKAGSDKL
              340       350 

>>XP_016875500 (OMIM: 610993) PREDICTED: ubiquitin carbo  (712 aa)
 initn: 721 init1: 191 opt: 602  Z-score: 638.0  bits: 128.1 E(85289): 8.5e-29
Smith-Waterman score: 710; 32.2% identity (58.5% similar) in 482 aa overlap (109-520:218-687)

       80        90       100       110       120       130        
pF1KB4 KVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLE
                                     ::.:..  .. ...  : :     : :.: 
XP_016 REVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASPAKDKVLS
       190       200       210       220       230       240       

      140       150             160       170       180            
pF1KB4 NSTLNSKLLKVNGSTT------AICATGLRNLGNTCFMNAILQSLSNIEQF-CCYFK---
       .:  :    ::. :..      .  .::::::::::.::..:: ::..  :  :..:   
XP_016 TSE-NEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFLKLDL
       250        260       270       280       290       300      

                     190                                   200     
pF1KB4 ---------------ELPAVE----------------------------LRNGKTAGRRT
                      . : :                             : .: . ::. 
XP_016 NQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGASKGRKM
        310       320       330       340       350       360      

           210       220       230       240       250       260   
pF1KB4 --YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHE
          . .   .. .:: .:..  . ..:.:. .  :: .... ::...: :::: ::::.:
XP_016 ELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQE
        370       380       390       400       410       420      

           270       280       290       300       310       320   
pF1KB4 FMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVN
       :.  :::... ::.   .:.:  :.      . .:..  :. . .::. :: : : ..:.
XP_016 FLCELLDKIQRELET--TGTSLPAL------IPTSQRKLIKQVLNVVNNIFHGQLLSQVT
        430       440               450       460       470        

           330       340       350       360       370       380   
pF1KB4 CLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELY
       :: : ..:  ..:: ::::..: ... . .:.  . : : . . : .::. : : : ..:
XP_016 CLACDNKSNTIEPFWDLSLEFPERYQCS-GKDIASQP-CLVTEMLAKFTETEAL-EGKIY
      480       490       500        510        520       530      

           390                  400       410       420        430 
pF1KB4 MCHKCKKKQK-----------STKKFWIQKLPKVLCLHLKRFHWTAYL-RNKVDTYVEFP
       .: .:..:..           . :.. : .::.:: ::::::.:..   :.:. ..: : 
XP_016 VCDQCNSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFE
         540       550       560       570       580       590     

              440       450       460       470         480        
pF1KB4 -LRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA--THEGRWFHFNDS
        . ...  :     ..  ::  .:::.:::.:::.: ::::::::   .. : : : :::
XP_016 EILNMEPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDS
         600       610       620       630       640       650     

      490       500       510       520                         
pF1KB4 TVTLTDEETVVKAKAYILFYVEHQAKAGSDKL                         
        ...   . : ::.::::::... .. : .::                         
XP_016 KLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
         660       670       680       690       700       710  

>--
 initn: 240 init1: 121 opt: 255  Z-score: 272.2  bits: 60.5 E(85289): 2e-08
Smith-Waterman score: 255; 26.3% identity (60.5% similar) in 152 aa overlap (3-154:7-138)

                   10        20        30        40        50      
pF1KB4     MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGH
             : :... . .: : ...   .:..: :  : ...: :.::.:: : ::::.. :
XP_016 MLAMDTCKHVGQ-LQLAQDHSSL---NPQKWHCVDCNTTESIWACLSCSHVACGRYIEEH
               10         20           30        40        50      

         60        70        80        90       100       110      
pF1KB4 AKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVRE
       : ::.....                : : .. . . ..:: :::.:.::.  : .. .:.
XP_016 ALKHFQESS----------------HPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRR
         60                        70        80        90       100

        120       130       140       150       160       170      
pF1KB4 HLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQS
        :. .... .    .. : :   .: ... .  .:. .                      
XP_016 TLSAIKSQNYHCTTRSGRFLRSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGK
              110       120       130       140       150       160

        180       190       200       210       220       230      
pF1KB4 LSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTA
                                                                   
XP_016 IFRTWFEQSPIGRKKQEEPFQEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLA
              170       180       190       200       210       220

>>NP_001035862 (OMIM: 610993) ubiquitin carboxyl-termina  (712 aa)
 initn: 721 init1: 191 opt: 602  Z-score: 638.0  bits: 128.1 E(85289): 8.5e-29
Smith-Waterman score: 710; 32.2% identity (58.5% similar) in 482 aa overlap (109-520:218-687)

       80        90       100       110       120       130        
pF1KB4 KVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLE
                                     ::.:..  .. ...  : :     : :.: 
NP_001 REVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASPAKDKVLS
       190       200       210       220       230       240       

      140       150             160       170       180            
pF1KB4 NSTLNSKLLKVNGSTT------AICATGLRNLGNTCFMNAILQSLSNIEQF-CCYFK---
       .:  :    ::. :..      .  .::::::::::.::..:: ::..  :  :..:   
NP_001 TSE-NEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFLKLDL
       250        260       270       280       290       300      

                     190                                   200     
pF1KB4 ---------------ELPAVE----------------------------LRNGKTAGRRT
                      . : :                             : .: . ::. 
NP_001 NQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGASKGRKM
        310       320       330       340       350       360      

           210       220       230       240       250       260   
pF1KB4 --YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHE
          . .   .. .:: .:..  . ..:.:. .  :: .... ::...: :::: ::::.:
NP_001 ELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQE
        370       380       390       400       410       420      

           270       280       290       300       310       320   
pF1KB4 FMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVN
       :.  :::... ::.   .:.:  :.      . .:..  :. . .::. :: : : ..:.
NP_001 FLCELLDKIQRELET--TGTSLPAL------IPTSQRKLIKQVLNVVNNIFHGQLLSQVT
        430       440               450       460       470        

           330       340       350       360       370       380   
pF1KB4 CLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELY
       :: : ..:  ..:: ::::..: ... . .:.  . : : . . : .::. : : : ..:
NP_001 CLACDNKSNTIEPFWDLSLEFPERYQCS-GKDIASQP-CLVTEMLAKFTETEAL-EGKIY
      480       490       500        510        520       530      

           390                  400       410       420        430 
pF1KB4 MCHKCKKKQK-----------STKKFWIQKLPKVLCLHLKRFHWTAYL-RNKVDTYVEFP
       .: .:..:..           . :.. : .::.:: ::::::.:..   :.:. ..: : 
NP_001 VCDQCNSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFE
         540       550       560       570       580       590     

              440       450       460       470         480        
pF1KB4 -LRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA--THEGRWFHFNDS
        . ...  :     ..  ::  .:::.:::.:::.: ::::::::   .. : : : :::
NP_001 EILNMEPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDS
         600       610       620       630       640       650     

      490       500       510       520                         
pF1KB4 TVTLTDEETVVKAKAYILFYVEHQAKAGSDKL                         
        ...   . : ::.::::::... .. : .::                         
NP_001 KLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
         660       670       680       690       700       710  

>--
 initn: 240 init1: 121 opt: 255  Z-score: 272.2  bits: 60.5 E(85289): 2e-08
Smith-Waterman score: 255; 26.3% identity (60.5% similar) in 152 aa overlap (3-154:7-138)

                   10        20        30        40        50      
pF1KB4     MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGH
             : :... . .: : ...   .:..: :  : ...: :.::.:: : ::::.. :
NP_001 MLAMDTCKHVGQ-LQLAQDHSSL---NPQKWHCVDCNTTESIWACLSCSHVACGRYIEEH
               10         20           30        40        50      

         60        70        80        90       100       110      
pF1KB4 AKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVRE
       : ::.....                : : .. . . ..:: :::.:.::.  : .. .:.
NP_001 ALKHFQESS----------------HPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRR
         60                        70        80        90       100

        120       130       140       150       160       170      
pF1KB4 HLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQS
        :. .... .    .. : :   .: ... .  .:. .                      
NP_001 TLSAIKSQNYHCTTRSGRFLRSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGK
              110       120       130       140       150       160

        180       190       200       210       220       230      
pF1KB4 LSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTA
                                                                   
NP_001 IFRTWFEQSPIGRKKQEEPFQEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLA
              170       180       190       200       210       220




520 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 14:55:58 2016 done: Thu Nov  3 14:56:00 2016
 Total Scan time:  9.120 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com