Result of FASTA (ccds) for
pFN21AB3766
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3766, 504 aa
1>>>pF1KB3766 504 - 504 aa - 504 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4943+/-0.0011; mu= 8.1153+/- 0.065
mean_var=138.7456+/-27.523, 0's: 0 Z-trim(107.1): 69 B-trim: 0 in 0/51
Lambda= 0.108884
statistics sampled from 9314 (9381) to 9314 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.288), width: 16
Scan time: 2.550
The best scores are: opt bits E(32554)
CCDS9479.1 DNAJC3 gene_id:5611|Hs108|chr13 ( 504) 3318 533.2 2.6e-151
CCDS45677.1 DNAJC7 gene_id:7266|Hs108|chr17 ( 494) 638 112.2 1.4e-24
CCDS45678.1 DNAJC7 gene_id:7266|Hs108|chr17 ( 438) 609 107.6 2.9e-23
>>CCDS9479.1 DNAJC3 gene_id:5611|Hs108|chr13 (504 aa)
initn: 3318 init1: 3318 opt: 3318 Z-score: 2830.1 bits: 533.2 E(32554): 2.6e-151
Smith-Waterman score: 3318; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB3 MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 HAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 HAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 LEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 LEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 SLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 SLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 QDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 QDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 WHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 WHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHR
430 440 450 460 470 480
490 500
pF1KB3 SWNSWQGFNPFSSGGPFRFKFHFN
::::::::::::::::::::::::
CCDS94 SWNSWQGFNPFSSGGPFRFKFHFN
490 500
>>CCDS45677.1 DNAJC7 gene_id:7266|Hs108|chr17 (494 aa)
initn: 323 init1: 187 opt: 638 Z-score: 555.0 bits: 112.2 E(32554): 1.4e-24
Smith-Waterman score: 638; 28.2% identity (62.8% similar) in 479 aa overlap (36-503:27-493)
10 20 30 40 50 60
pF1KB3 SVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQFHAAVD
..: : :. : . .: . . :.:
CCDS45 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAID
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAE
: : : ::.... .:. . :: : . ..: .:. ..:..:. :. :. :
CCDS45 MCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAAC
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 DDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV
.:...:. .... .::... ... ... .. : . : . :. .. .:. ::
CCDS45 RSFQRALEL---DHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB3 WDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFY-KISTLYYQLGDHELSLSE
... :.:::. :. .: : . .. . :..:.: . :::. : ...
CCDS45 ACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYE-DCIEKAVQF
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB3 VRECLKLDQDHKR-CFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAE
. :.. ::.. :.: ...: :. :.... ...: : : : .. .:.
CCDS45 FVQALRMAPDHEKACIAC-RNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPN---
240 250 260 270 280
310 320 330 340 350
pF1KB3 YTVRSKERI-CH---CFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEA
..... .. :. :: .: .::. :....... ..: ::. :. :.:.::
CCDS45 -NIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEA
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 IQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLAL
..::: . . .:. .. .. :..:: ::.:...:::::::: .::...:: ::::: ::
CCDS45 VRDYEKVYQ-TEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRAL
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB3 QWHPDNFQ--NEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNP
. ::: . . : .:. :::: ... : .::::. . ..:.:.: :: :... : .:
CCDS45 MHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSGQD-LDEEGMNMGDFDP
410 420 430 440 450 460
480 490 500
pF1KB3 ---FHRSWNSWQGFNPFSSGGPFRFKFHFN
:. ... ::. : ..:: : :.:
CCDS45 NNIFKAFFGGPGGFS-FEASGPGNFFFQFG
470 480 490
>>CCDS45678.1 DNAJC7 gene_id:7266|Hs108|chr17 (438 aa)
initn: 323 init1: 187 opt: 609 Z-score: 531.1 bits: 107.6 E(32554): 2.9e-23
Smith-Waterman score: 609; 28.8% identity (64.1% similar) in 448 aa overlap (68-503:3-437)
40 50 60 70 80 90
pF1KB3 EKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKV
: : : ::.... .:. . :: : .
CCDS45 MCPKNASYYGNRAATLMMLGRFREALGDAQQS
10 20 30
100 110 120 130 140 150
pF1KB3 IQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRL
..: .:. ..:..:. :. :. : .:...:. .... .::... ... ...
CCDS45 VRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALEL---DHKNAQAQQEFKNANAVMEY
40 50 60 70 80
160 170 180 190 200 210
pF1KB3 RSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKL
.. : . : . :. .. .:. :: ... :.:::. :. .: : . ..
CCDS45 EKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRM
90 100 110 120 130 140
220 230 240 250 260 270
pF1KB3 KNDNTEAFY-KISTLYYQLGDH-ELSLSEVRECLKLDQDHKR-CFAHYKQVKKLNKLIES
. :..:.: . :::. : : ... . :.. ::.. :.: ...: :. :.
CCDS45 DSTNADALYVRGLCLYYE--DCIEKAVQFFVQALRMAPDHEKACIAC-RNAKALKAKKED
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB3 AEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERI-CH---CFSKDEKPVEAIRVCS
... ...: : : : .. .:. ..... .. :. :: .: .::. :.
CCDS45 GNKAFKEGNYKLAYELYTEALGIDPN----NIKTNAKLYCNRGTVNSKLRKLDDAIEDCT
210 220 230 240 250 260
340 350 360 370 380 390
pF1KB3 EVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS
...... ..: ::. :. :.:.::..::: . . .:. .. .. :..:: ::.:
CCDS45 NAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ-TEKTKEHKQLLKNAQLELKKS
270 280 290 300 310 320
400 410 420 430 440
pF1KB3 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQ--NEEEKKKAEKKFIDIAAAKEV
...:::::::: .::...:: ::::: ::. ::: . . : .:. :::: ... : .
CCDS45 KRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTI
330 340 350 360 370 380
450 460 470 480 490 500
pF1KB3 LSDPEMRKKFDDGEDPLDAESQQGGGGNP---FHRSWNSWQGFNPFSSGGPFRFKFHFN
::::. . ..:.:.: :: :... : .: :. ... ::. : ..:: : :.:
CCDS45 LSDPKKKTRYDSGQD-LDEEGMNMGDFDPNNIFKAFFGGPGGFS-FEASGPGNFFFQFG
390 400 410 420 430
504 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 13:55:26 2016 done: Thu Nov 3 13:55:26 2016
Total Scan time: 2.550 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]