Result of FASTA (ccds) for
pFN21AB3329
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3329, 949 aa
1>>>pF1KB3329 949 - 949 aa - 949 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3916+/-0.00101; mu= 12.2915+/- 0.061
mean_var=144.6223+/-27.892, 0's: 0 Z-trim(108.9): 194 B-trim: 5 in 1/52
Lambda= 0.106649
statistics sampled from 10292 (10488) to 10292 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.322), width: 16
Scan time: 4.870
The best scores are: opt bits E(32554)
CCDS47284.1 PCDHA11 gene_id:56138|Hs108|chr5 ( 949) 6213 968.5 0
CCDS75326.1 PCDHA11 gene_id:56138|Hs108|chr5 ( 810) 5168 807.7 0
CCDS4240.1 PCDHA13 gene_id:56136|Hs108|chr5 ( 950) 5035 787.3 0
CCDS54919.1 PCDHA8 gene_id:56140|Hs108|chr5 ( 950) 5034 787.1 0
CCDS47281.1 PCDHA6 gene_id:56142|Hs108|chr5 ( 950) 5003 782.3 0
CCDS54913.1 PCDHA1 gene_id:56147|Hs108|chr5 ( 950) 5000 781.9 0
CCDS54916.1 PCDHA4 gene_id:56144|Hs108|chr5 ( 947) 4991 780.5 0
CCDS54921.1 PCDHA10 gene_id:56139|Hs108|chr5 ( 948) 4967 776.8 0
CCDS54914.1 PCDHA2 gene_id:56146|Hs108|chr5 ( 948) 4963 776.2 0
CCDS54915.1 PCDHA3 gene_id:56145|Hs108|chr5 ( 950) 4940 772.6 0
CCDS54920.1 PCDHA9 gene_id:9752|Hs108|chr5 ( 950) 4876 762.8 0
CCDS47285.1 PCDHA12 gene_id:56137|Hs108|chr5 ( 941) 3968 623.1 7.9e-178
CCDS75327.1 PCDHA12 gene_id:56137|Hs108|chr5 ( 792) 3934 617.8 2.6e-176
CCDS54917.1 PCDHA5 gene_id:56143|Hs108|chr5 ( 936) 3931 617.4 4.1e-176
CCDS54918.1 PCDHA7 gene_id:56141|Hs108|chr5 ( 937) 3929 617.1 5e-176
CCDS75325.1 PCDHA10 gene_id:56139|Hs108|chr5 ( 844) 3924 616.3 7.9e-176
CCDS64269.1 PCDHA2 gene_id:56146|Hs108|chr5 ( 808) 3918 615.3 1.4e-175
CCDS54912.1 PCDHA1 gene_id:56147|Hs108|chr5 ( 686) 2608 413.7 6e-115
CCDS47282.1 PCDHA6 gene_id:56142|Hs108|chr5 ( 686) 2604 413.1 9.2e-115
CCDS34255.1 PCDHA10 gene_id:56139|Hs108|chr5 ( 685) 2602 412.8 1.1e-114
CCDS4261.1 PCDHGC3 gene_id:5098|Hs108|chr5 ( 934) 1979 317.0 1e-85
CCDS75339.1 PCDHGB5 gene_id:56101|Hs108|chr5 ( 923) 1975 316.4 1.6e-85
CCDS54928.1 PCDHGB4 gene_id:8641|Hs108|chr5 ( 923) 1946 312.0 3.5e-84
CCDS47293.1 PCDHGB7 gene_id:56099|Hs108|chr5 ( 929) 1946 312.0 3.5e-84
CCDS75348.1 PCDHGC3 gene_id:5098|Hs108|chr5 ( 863) 1943 311.5 4.6e-84
CCDS75346.1 PCDHGA12 gene_id:26025|Hs108|chr5 ( 820) 1936 310.4 9.3e-84
CCDS4260.1 PCDHGA12 gene_id:26025|Hs108|chr5 ( 932) 1936 310.4 1e-83
CCDS75345.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 837) 1925 308.7 3e-83
CCDS47294.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 935) 1925 308.7 3.3e-83
CCDS75343.1 PCDHGA10 gene_id:56106|Hs108|chr5 ( 850) 1922 308.2 4.2e-83
CCDS47292.1 PCDHGA10 gene_id:56106|Hs108|chr5 ( 936) 1922 308.3 4.6e-83
CCDS75344.1 PCDHGB7 gene_id:56099|Hs108|chr5 ( 808) 1920 307.9 5e-83
CCDS75333.1 PCDHGA5 gene_id:56110|Hs108|chr5 ( 813) 1919 307.8 5.6e-83
CCDS75331.1 PCDHGA4 gene_id:56111|Hs108|chr5 ( 851) 1919 307.8 5.8e-83
CCDS54925.1 PCDHGA5 gene_id:56110|Hs108|chr5 ( 931) 1919 307.8 6.3e-83
CCDS75335.1 PCDHGA6 gene_id:56109|Hs108|chr5 ( 818) 1917 307.5 7e-83
CCDS54926.1 PCDHGA6 gene_id:56109|Hs108|chr5 ( 932) 1917 307.5 7.8e-83
CCDS75330.1 PCDHGB1 gene_id:56104|Hs108|chr5 ( 810) 1914 307.0 9.6e-83
CCDS54923.1 PCDHGB1 gene_id:56104|Hs108|chr5 ( 927) 1914 307.0 1.1e-82
CCDS58979.2 PCDHGA4 gene_id:56111|Hs108|chr5 ( 962) 1914 307.1 1.1e-82
CCDS54922.1 PCDHGA1 gene_id:56114|Hs108|chr5 ( 931) 1900 304.9 4.8e-82
CCDS47289.1 PCDHGA2 gene_id:56113|Hs108|chr5 ( 932) 1900 304.9 4.8e-82
CCDS54929.1 PCDHGB6 gene_id:56100|Hs108|chr5 ( 930) 1899 304.7 5.3e-82
CCDS54924.1 PCDHGB2 gene_id:56103|Hs108|chr5 ( 931) 1896 304.3 7.3e-82
CCDS75332.1 PCDHGB2 gene_id:56103|Hs108|chr5 ( 811) 1892 303.6 1e-81
CCDS75350.1 PCDHGC5 gene_id:56097|Hs108|chr5 ( 878) 1883 302.3 2.8e-81
CCDS4263.1 PCDHGC5 gene_id:56097|Hs108|chr5 ( 944) 1883 302.3 2.9e-81
CCDS75336.1 PCDHGA7 gene_id:56108|Hs108|chr5 ( 817) 1881 301.9 3.3e-81
CCDS75338.1 PCDHGA8 gene_id:9708|Hs108|chr5 ( 820) 1881 301.9 3.3e-81
CCDS54927.1 PCDHGA7 gene_id:56108|Hs108|chr5 ( 932) 1881 302.0 3.6e-81
>>CCDS47284.1 PCDHA11 gene_id:56138|Hs108|chr5 (949 aa)
initn: 6213 init1: 6213 opt: 6213 Z-score: 5172.8 bits: 968.5 E(32554): 0
Smith-Waterman score: 6213; 100.0% identity (100.0% similar) in 949 aa overlap (1-949:1-949)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 VRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 ELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 ADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 GYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 TATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 KEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB3 VSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQ
850 860 870 880 890 900
910 920 930 940
pF1KB3 EPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940
>>CCDS75326.1 PCDHA11 gene_id:56138|Hs108|chr5 (810 aa)
initn: 5168 init1: 5168 opt: 5168 Z-score: 4304.8 bits: 807.7 E(32554): 0
Smith-Waterman score: 5168; 100.0% identity (100.0% similar) in 797 aa overlap (1-797:1-797)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 VRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 ELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 ADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 GYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 TATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 TATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 KEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPT
:::::::::::::::::
CCDS75 KEEEGERQEPGSNHPGQVSFLQIPPIRKCM
790 800 810
>>CCDS4240.1 PCDHA13 gene_id:56136|Hs108|chr5 (950 aa)
initn: 5026 init1: 3756 opt: 5035 Z-score: 4193.3 bits: 787.3 E(32554): 0
Smith-Waterman score: 5035; 81.7% identity (92.4% similar) in 945 aa overlap (10-949:7-950)
10 20 30 40 50
pF1KB3 MFGFQRRGLGTPR---LQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELA
: :: : ::::.: ::.::::::::: :::::::::::::::::::::
CCDS42 MLSSWQGGPRPRQLLLWLLILAAWETGSGQLHYSVPEEAKHGTFVGRIAQDLGLELA
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 ELVQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVF
::: :::::::: :::::::::::::::::::::::::::.:::::::::::::::::::
CCDS42 ELVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 HVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEY
::.:.:.:::::::.: .....::::. ..::::.::::::: :. :::::. :.:
CCDS42 HVEVKVRDINDNPPIFPESKKRIIIAESRPPETRFPLDGASDADIGVNSALTYRLDPNDY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 FSLDSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVND
:.::. .. .:.. :::.:.:.::::. : .:::::.:::::::::::.::. .:::::
CCDS42 FTLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVND
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 NDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQ
: ::: .: :::...::: . :::.:::::: :.:.::...::. . : . ::..
CCDS42 NAPEFYQSVYKVTVLENAFNGTLVIKLNATDPDDGTNGDIVYSFRRPVWPAVVYAFTINP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 NNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSL
::::.:..: ::.::.:.:.: :.:.:::. :::::::. ::.::.:::.:::..:::::
CCDS42 NNGEIRTKGKLDFEEKKLYEISVEAVDKGNIPMAGHCTLLVEVLDVNDNAPEVTITSLSL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 PVREDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDREN
:.:::.:::..:::::::::::: ::::::.::::::::::::.:::::::::::::::.
CCDS42 PIREDTQPSAIIALISVSDRDSGSNGQVTCTLTPHVPFKLVSTYKNYYSLVLDSALDRES
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 VWAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTV
: :::::::::::::::::::: ::: :::::::::::::::::::::::::::::::::
CCDS42 VSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTV
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 SARDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSA
::.::::::::::::::::::.:.::::::::::::::::::::::::::::::::::::
CCDS42 SAQDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSA
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB3 RDAGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAV
::.:::::.::::::::::::::::::::. ::::::.:..:.::::::::::::::::
CCDS42 RDSGVPPLGSNVTLQVFVLDENDNAPALLTPGAGSAGGTVSELMPRSVGAGHVVAKVRAV
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB3 DADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEP
::::::::::::::: :: :.::::::::::::::::: :::.:.:.:::::::::::::
CCDS42 DADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAPHHRLLVLVKDHGEP
600 610 620 630 640 650
660 670 680 690 700 710
pF1KB3 ALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLL
:::::::::.:::::::::.::::. :::..:::::::::::::::::.:::::::::::
CCDS42 ALTATATVLLSLVESGQAPQASSRASAGAVGPEAALVDVNVYLIIAICAVSSLLVLTLLL
660 670 680 690 700 710
720 730 740 750 760 770
pF1KB3 YTALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLP
:::: :: :::::::::::::::: :.:::::::::: :::: ::: ::::::::::::
CCDS42 YTALRCSAPPTEGACAPGKPTLVCSSAAGSWSYSQQRRPRVCSGEGPHKTDLMAFSPSLP
720 730 740 750 760 770
780 790 800 810 820 830
pF1KB3 LGLNKEE-EGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPD
:.. : :.:.: :. .::::::::::::::::::::::::::::::::::::::
CCDS42 PCLGSAEGTGQREED-SECLKEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPD
780 790 800 810 820 830
840 850 860 870 880 890
pF1KB3 QQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAI
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 ISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940 950
>>CCDS54919.1 PCDHA8 gene_id:56140|Hs108|chr5 (950 aa)
initn: 5039 init1: 3758 opt: 5034 Z-score: 4192.4 bits: 787.1 E(32554): 0
Smith-Waterman score: 5034; 81.6% identity (91.8% similar) in 948 aa overlap (4-949:3-950)
10 20 30 40 50
pF1KB3 MFGFQRRG-LGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAEL
.. :: ::. :: : :::: :.:::::::::: :::::::::::::::::::::::
CCDS54 MDYHWRGELGSWRLLLLLLLLAAWKVGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAEL
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 VQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHV
: :::::::: : :::::.:::::::::::::::::::.:::::::::::::::::::::
CCDS54 VPRLFRVASKRHRDLLEVSLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 NVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFS
.:::::.::::::: ...:::...::.. :::::::::::::. :..::::::...::
CCDS54 DVEVKDVNDNPPVFRVKDQKLFVSESRMPDSRFPLEGASDADVGANSVLTYRLSSHDYFM
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 LDSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDND
:: ... . : . :.:.:::::: .: .:.:::::::::::::::.::: :::::::
CCDS54 LDVNSKNDENKLVELVLRKSLDREDAPAHHLFLTATDGGKPELTGTVQLLVTVLDVNDNA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 PEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQNN
: :..:::.: ..::: . : :.::::.: :::.:: ..::. : .. :..:.:.
CCDS54 PTFEQSEYEVRIFENADNGTTVIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 GEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPV
::. . :.::.:....::: ..::::: ::::::::: :.::: ::: ::.:.:::::::
CCDS54 GEIVIRGNLDFEQENLYKILIDATDKGHPPMAGHCTVLVRILDKNDNVPEIALTSLSLPV
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 REDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVW
::::: .::::::::.: :::.:::::::: :::::::::::::::::::::::::: :
CCDS54 REDAQFGTVIALISVNDLDSGANGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRERVS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 AYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSA
:::::::::::::::::::: .::::::::::::::::::::::::::::::::::::::
CCDS54 AYELVVTARDGGSPSLWATASLSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSA
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 RDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARD
:::::::::::::::::::.:.:.::::.:::.:::::::::::::::::::::::::::
CCDS54 RDADAQENALVSYSLVERRVGERSLSSYISVHTESGKVYALQPLDHEELELLQFQVSARD
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB3 AGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDA
::::::.:::::::::::::::::::: ..:..:::..:::::::::::::::::::::
CCDS54 AGVPPLGSNVTLQVFVLDENDNAPALLEPRVGGTGGAASKLVPRSVGAGHVVAKVRAVDA
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB3 DSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPAL
::::::::::::::::.. :::::::::::::::::.:::::::::::::::::::::::
CCDS54 DSGYNAWLSYELQPAASSPRIPFRVGLYTGEISTTRVLDEADSPRHRLLVLVKDHGEPAL
600 610 620 630 640 650
660 670 680 690 700 710
pF1KB3 TATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYT
:::::::::::::::::::::: ::. .:::::::::::::::::.:::::::::::::
CCDS54 TATATVLVSLVESGQAPKASSRQSAGVLGPEAALVDVNVYLIIAICAVSSLLVLTLLLYT
660 670 680 690 700 710
720 730 740 750 760 770
pF1KB3 ALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLG
:: :: ::::.: :::::::: ::::::::::. ::::: ::::::::::::: ::
CCDS54 ALRCSALPTEGGCRAGKPTLVCSSAVGSWSYSQQQPQRVCSGEGPPKTDLMAFSPCLPPD
720 730 740 750 760 770
780 790 800 810 820 830
pF1KB3 LNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQW
:.. . ::.:. . .: .:::::::::::::::::::::::::::::::::::::::::
CCDS54 LGSVDVGEEQDLNVDHGLKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQW
780 790 800 810 820 830
840 850 860 870 880 890
pF1KB3 PTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISI
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 RQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940 950
>>CCDS47281.1 PCDHA6 gene_id:56142|Hs108|chr5 (950 aa)
initn: 5008 init1: 3742 opt: 5003 Z-score: 4166.7 bits: 782.3 E(32554): 0
Smith-Waterman score: 5003; 81.7% identity (92.1% similar) in 946 aa overlap (9-949:9-950)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
:: : : :::: :.:::::::::: ::::::::::::::::::::::::
CCDS47 MVFTPEDRLGKQCLLLPLLLLAAWKVGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
::::.::: . :::::::::::::::::::::::::.:::::::::::::::::::::.
CCDS47 PRLFRMASKDREDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
:::.:::::::.: ..::..:: ::. :: ::::::::::. :..:::.::..:::.:
CCDS47 VEVRDINDNPPLFPVEEQRVLIYESRLPDSVFPLEGASDADVGSNSILTYKLSSSEYFGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
: :. . :...:.::::::::..: ::.:::::::::::::::.::: ::::::: :
CCDS47 DVKINSDDNKQIGLLLKKSLDREEAPAHNLFLTATDGGKPELTGTVQLLVTVLDVNDNAP
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNG--RHLFTLDQNN
:..:::.: ..::: . : :..:::.:::::.:: ..::. :. : :..:.:.
CCDS47 TFEQSEYEVRIFENADNGTTVIRLNASDRDEGANGAISYSFNSLVAAMVIDH-FSIDRNT
250 260 270 280 290
300 310 320 330 340 350
pF1KB3 GEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPV
::. . :.::.:....::: ..::::: ::::::::: :.::: ::: ::.:.:::::::
CCDS47 GEIVIRGNLDFEQENLYKILIDATDKGHPPMAGHCTVLVRILDKNDNVPEIALTSLSLPV
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 REDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVW
::::: .::::::::.: :::.::::.::::::::::::::::::::::::::::::.:
CCDS47 REDAQFGTVIALISVNDLDSGANGQVNCSLTPHVPFKLVSTFKNYYSLVLDSALDRESVS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 AYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSA
:::::::::::::::::::: .::::::.:::::::::::::::::::::::::::::::
CCDS47 AYELVVTARDGGSPSLWATASLSVEVADMNDNAPAFAQPEYTVFVKENNPPGCHIFTVSA
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 RDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARD
:::::::::::::::::::.:.::::::.:::::::::::::::::::::::::::::::
CCDS47 RDADAQENALVSYSLVERRVGERALSSYISVHAESGKVYALQPLDHEELELLQFQVSARD
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB3 AGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDA
::::::.::::::::::::::::::::: ..:..::::..:::::.:::.::::::::::
CCDS47 AGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVSELVPRSLGAGQVVAKVRAVDA
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB3 DSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPAL
:::::::::::::: :...:.:::::::::::::::.:::::::::::::::::::::::
CCDS47 DSGYNAWLSYELQPPASSARFPFRVGLYTGEISTTRVLDEADSPRHRLLVLVKDHGEPAL
600 610 620 630 640 650
660 670 680 690 700 710
pF1KB3 TATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYT
::::::::::::::::::::::. .:::.:::::::::::::::::.:::::::::::::
CCDS47 TATATVLVSLVESGQAPKASSRASVGAAGPEAALVDVNVYLIIAICAVSSLLVLTLLLYT
660 670 680 690 700 710
720 730 740 750 760 770
pF1KB3 ALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSL---
:: :: ::::::. ::::::: ::::::::::::::::: ::::: :::::::::
CCDS47 ALRCSAPPTEGACTADKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKMDLMAFSPSLSPC
720 730 740 750 760 770
780 790 800 810 820 830
pF1KB3 PLGLNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPD
:. ..: .: :. . .: ..::::::::::::::::::::::::::::::::::::::
CCDS47 PIMMGK---AENQDLNEDHDAKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPD
780 790 800 810 820 830
840 850 860 870 880 890
pF1KB3 QQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAI
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 ISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940 950
>>CCDS54913.1 PCDHA1 gene_id:56147|Hs108|chr5 (950 aa)
initn: 4995 init1: 3729 opt: 5000 Z-score: 4164.2 bits: 781.9 E(32554): 0
Smith-Waterman score: 5000; 81.9% identity (91.7% similar) in 948 aa overlap (4-949:3-950)
10 20 30 40 50
pF1KB3 MFGFQRRG-LGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAEL
:.::: ::. : :::::: :::::::::::. :::::::::::.:::::::::::
CCDS54 MVFSRRGGLGARDLLLWLLLLAAWEVGSGQLHYSIPEEAKHGTFVGRVAQDLGLELAEL
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 VQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHV
: :::::::::: :::::::::::::::::::::::: :::::::::.:.:::::::::
CCDS54 VPRLFRVASKTHRDLLEVNLQNGILFVNSRIDREELCQWSAECSIHLELIADRPLQVFHV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 NVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFS
.:.::::::::::: ::: ..: ::. .::::.:::.:::: :::::: :: ..:::
CCDS54 EVKVKDINDNPPVFRGREQIIFIPESRLLNSRFPIEGAADADIGANALLTYTLSPSDYFS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 LDSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDND
:: .. . : : : :.: ::::.::::.::::::::::::: :::.::. :::::::
CCDS54 LDVEASDELSKSLWLELRKYLDREETPELHLLLTATDGGKPELQGTVELLITVLDVNDNA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 PEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQNN
: ::.. :.: :.:..:. ::: :::.: ::::::::..:. : :. . .. : .:...
CCDS54 PLFDQAVYRVHLLETTANGTLVTTLNASDADEGVNGEVVFSFDSGISRDIQEKFKVDSSS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 GEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPV
::.:. :::::.: :.:.:.:.:::.:::..:: : :..::.:::.::.::::: ::.
CCDS54 GEIRLIDKLDYEETKSYEIQVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELAVTSLYLPI
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 REDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVW
:::: :::::::.:::::::.:::::::: ::::::::::::::::::::::::::..
CCDS54 REDAPLSTVIALITVSDRDSGANGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRESLS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 AYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSA
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSA
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 RDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARD
:::::::::::::::::::.:.::::.:::::::::::::::::::::::::::::::::
CCDS54 RDADAQENALVSYSLVERRVGERALSNYVSVHAESGKVYALQPLDHEELELLQFQVSARD
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB3 AGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDA
::::::.::::::::::::::::::::: ..:.. :::..:::: :::::::::::::::
CCDS54 AGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSELVPRLVGAGHVVAKVRAVDA
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB3 DSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPAL
::::::::::::::::::.:::::::::::::::::.::::: :.::::::::::::::
CCDS54 DSGYNAWLSYELQPAAGGARIPFRVGLYTGEISTTRVLDEADLSRYRLLVLVKDHGEPAL
600 610 620 630 640 650
660 670 680 690 700 710
pF1KB3 TATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYT
::::::::::::::::::::::. .:.:.:::::::::::::::::.:::::::::::::
CCDS54 TATATVLVSLVESGQAPKASSRASVGVAGPEAALVDVNVYLIIAICAVSSLLVLTLLLYT
660 670 680 690 700 710
720 730 740 750 760 770
pF1KB3 ALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLG
:: :. ::::: .::::::::: :.:::: :::::::::: :::::::::::::.: .
CCDS54 ALRCSVPPTEGAYVPGKPTLVCSSALGSWSNSQQRRQRVCSSEGPPKTDLMAFSPGLSPS
720 730 740 750 760 770
780 790 800 810 820 830
pF1KB3 LNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQW
:: :..:. : . . :.:::::::::::::::::::::::::::::::::::::::::
CCDS54 LNTSERNEQPEANLDLSGNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQW
780 790 800 810 820 830
840 850 860 870 880 890
pF1KB3 PTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISI
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 RQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940 950
>>CCDS54916.1 PCDHA4 gene_id:56144|Hs108|chr5 (947 aa)
initn: 3980 init1: 2688 opt: 4991 Z-score: 4156.7 bits: 780.5 E(32554): 0
Smith-Waterman score: 4991; 81.9% identity (91.5% similar) in 943 aa overlap (8-949:8-947)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
: . :: : :::: ::.:.::::::::::::::::::::::::::::::::
CCDS54 MEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
:::::::: .: ::::::::::::::::::::::: .:::::::::::::::::::::.
CCDS54 PRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSAECSIHLEVIVDRPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
:::.::::::::: ...: ::::. :::::::::::::: :::::::::: ::::::
CCDS54 VEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
..: . . .: :.:::.::::::..::. :.:::::::::::::::.::. :::.::: :
CCDS54 EKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKPELTGTVQLLITVLDANDNAP
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQNNG
::.. ::: :.::. . :::.::::.: :::.::...::. . :.:: . : .: .:
CCDS54 AFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPNVKSKFHIDPITG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 EVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVR
.. :.: .:.::.: :.: :.. ::: :..::: : ::. :.::: :.. :::::.:
CCDS54 QIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIR
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB3 EDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWA
::: .::::::::::.: :::: :::::: :::::::::::::::::::::::::.: :
CCDS54 EDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVSTFKNYYSLVLDSALDRESVSA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB3 YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAW
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB3 DADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
::::::::::::::::::.:.::::::::::::::::::::::::::::::::::.::::
CCDS54 DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVTARDA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB3 GVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDAD
:::::.::::::::::::::::::::: .::..::::..::: :::.:::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSELVPWSVGVGHVVAKVRAVDAD
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB3 SGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALT
:::::::::::::..::.:::::::::::::::::::::.:.::::::::::::::::::
CCDS54 SGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPALT
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB3 ATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTA
:::::::::::::::::::::.:.::..:.:::::::::::::::.::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB3 LWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGL
: :: :::::::::::::::: :::::::::::: :::: :::::::::::::::: .
CCDS54 LRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCSGEGPPKTDLMAFSPSLPDSR
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB3 NKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
..:.. . : . ..::::::::::::::::::::::::::::::::::::::::::
CCDS54 DREDQLQTTEESF---AKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830
840 850 860 870 880 890
pF1KB3 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940
>>CCDS54921.1 PCDHA10 gene_id:56139|Hs108|chr5 (948 aa)
initn: 2431 init1: 2431 opt: 4967 Z-score: 4136.7 bits: 776.8 E(32554): 0
Smith-Waterman score: 4967; 82.1% identity (91.6% similar) in 942 aa overlap (9-949:8-948)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
::. : : :::: :::::::::::: :::.::::::::::::::::::::
CCDS54 MVSRCSCLGVQCLLLSLLLLAAWEVGSGQLHYSVYEEARHGTFVGRIAQDLGLELAELV
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
::::::::: :::::::::::::::::::::::::::.:.:::::::::::::::::::.
CCDS54 QRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSVECSIHLEVIVDRPLQVFHVD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
::::::::::: ::. :::: : ::. :::::::::::::. :::::::.:: :::: :
CCDS54 VEVKDINDNPPRFSVTEQKLSIPESRLLDSRFPLEGASDADVGENALLTYKLSPNEYFVL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
: .. . : :.:.: ::::..:.:.::::::::::::.::.: ::. :::.::: :
CCDS54 DIINKKDKDKFPVLVLRKLLDREENPQLKLLLTATDGGKPEFTGSVSLLILVLDANDNAP
180 190 200 210 220 230
250 260 270 280 290
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQNNG
::. :.:...:: ...:::..:::.: :::.: :. ::. : . :. :. : ... .:
CCDS54 IFDRPVYEVKMYENQVNQTLVIRLNASDSDEGINKEMMYSFSSLVPPTIRRKFWINERTG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 EVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVR
:..:: ..:.:... :.:.:..::::.:::.::::: ::.:: ::::::: ::::::::.
CCDS54 EIKVNDAIDFEDSNTYEIHVDVTDKGNPPMVGHCTVLVELLDENDNSPEVIVTSLSLPVK
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 EDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWA
:::: .::::::::::.:::.:::::::::::::::::::.::::::::::::::: : :
CCDS54 EDAQVGTVIALISVSDHDSGANGQVTCSLTPHVPFKLVSTYKNYYSLVLDSALDRERVSA
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
::::::::::::: ::::: ::::::::::::::::: :::::::::::::::::::::
CCDS54 YELVVTARDGGSPPLWATASVSVEVADVNDNAPAFAQSEYTVFVKENNPPGCHIFTVSAW
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 DADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
::::::::::::::::::::.:.::::::::::::::::::::::::::::::::::::.
CCDS54 DADAQENALVSYSLVERRLGERSLSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDG
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB3 GVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDAD
:::::.::.::::::::::::::::::. ::::::::..:: ::: ::::::::::::::
CCDS54 GVPPLGSNLTLQVFVLDENDNAPALLASPAGSAGGAVSELVLRSVVAGHVVAKVRAVDAD
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB3 SGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALT
:::::::::::: :: :.:::::::::::::::::::::.::::.::::::::::::.::
CCDS54 SGYNAWLSYELQSAAVGARIPFRVGLYTGEISTTRALDETDSPRQRLLVLVKDHGEPSLT
600 610 620 630 640 650
660 670 680 690 700 710
pF1KB3 ATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTA
:::::::::::..::::::::. .:.: ::.::::::::::::::.::::::::::::::
CCDS54 ATATVLVSLVEGSQAPKASSRASVGVA-PEVALVDVNVYLIIAICAVSSLLVLTLLLYTA
660 670 680 690 700 710
720 730 740 750 760 770
pF1KB3 LWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGL
: ::.::::::.: ::::::: ::::::::::::::::: :: ::.::::::::::
CCDS54 LRCSAAPTEGACGPVKPTLVCSSAVGSWSYSQQRRQRVCSGEGLPKADLMAFSPSLPPCP
720 730 740 750 760 770
780 790 800 810 820 830
pF1KB3 NKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
. .:: : :..: .::::::::::::::::::::::::::::::::::::::::::
CCDS54 MVDVDGEDQSIGGDHSRKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
780 790 800 810 820 830
840 850 860 870 880 890
pF1KB3 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940
>>CCDS54914.1 PCDHA2 gene_id:56146|Hs108|chr5 (948 aa)
initn: 4966 init1: 2662 opt: 4963 Z-score: 4133.4 bits: 776.2 E(32554): 0
Smith-Waterman score: 4963; 81.6% identity (91.5% similar) in 945 aa overlap (6-949:6-948)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
::: :. : :::: ::::::::.::: :::::::::::::::::::: :::
CCDS54 MASSIRRGRGAWTRLLSLLLLAAWEVGSGQLRYSVPEEAKHGTFVGRIAQDLGLELEELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
:::::::: :::::::::::::::::::::::::::.:::::::.:::::::::::::.
CCDS54 PRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHVEVIVDRPLQVFHVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
:::::::::::.: . . . . ::. :::::::::::::: ::::.:.::..:.: :
CCDS54 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKLSSSEFFFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
: .: . . :::.: ::::::.: :.::::.:::::::::::::..:..:::::::.:
CCDS54 DIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVNDNEP
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQNNG
: .: :::.:.::.:. :::.::::.: ::: :.:..::: : .. . . ::.: .:
CCDS54 TFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 EVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVR
:.:..: ::::: : :.:.: ::::::: :.::: . ....: :::.:::..::::::.
CCDS54 EIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDINDNTPEVSITSLSLPIS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB3 EDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWA
:.:. .::::::.:::::::.::.::::::::::::::::::::::::::::::::.: :
CCDS54 ENASLGTVIALITVSDRDSGTNGHVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRESVSA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB3 YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
::::::::::::::::::. ::.::::::::::::::::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATTSVSIEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAW
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB3 DADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
::::::::::::::::::.:.::::::::::::::::::::::::::.::::::::::::
CCDS54 DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEEVELLQFQVSARDA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB3 GVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDAD
:::::.::::::::::::::::::::: .::.:.:::..::: :::::::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLAPRAGTAAGAVSELVPWSVGAGHVVAKVRAVDAD
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB3 SGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALT
:::::::::::: ..:..::::::::::::::::::::::::::::::::::::::::::
CCDS54 SGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALT
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB3 ATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTA
:::::::::::::::::::::. .:::. ::.:::::::::::::.::::::::.:::::
CCDS54 ATATVLVSLVESGQAPKASSRAWVGAAGSEATLVDVNVYLIIAICAVSSLLVLTVLLYTA
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB3 LWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGL
: :. ::::: :::::::::: ::::::::::::::::: : ::::::::::::: :
CCDS54 LRCSVPPTEGARAPGKPTLVCSSAVGSWSYSQQRRQRVCSGEDPPKTDLMAFSPSLSQGP
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB3 NKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
.. :: .: :.. :.::::::::::::::::::::::::::::::::::::::::::
CCDS54 DSAEE--KQLSESEYVGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830
840 850 860 870 880 890
pF1KB3 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940
>>CCDS54915.1 PCDHA3 gene_id:56145|Hs108|chr5 (950 aa)
initn: 4940 init1: 3727 opt: 4940 Z-score: 4114.3 bits: 772.6 E(32554): 0
Smith-Waterman score: 4940; 81.2% identity (91.0% similar) in 946 aa overlap (6-949:6-950)
10 20 30 40 50 60
pF1KB3 MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
:. :. : : :::: ::::::::::::::::::::::::::::::::::::
CCDS54 MLFSWREDPGAQCLLLSLLLLAASEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
:::::::: :::::::::::::::::::::::::::.:::::::::::::::::::::.
CCDS54 PRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
::::::::: ::: . ..:.:.::.: ::: ::::::::: :.:::: :...:::.:
CCDS54 VEVKDINDNAPVFPMAVKNLFISESRQPGSRFSLEGASDADIGTNSLLTYSLDSTEYFTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
: : ..:: :.:.:::.:.:: ::. ::.:: ::::::::::..: . ::::::: :
CCDS54 DVKRNDEEIKSLGLVLKKNLNREDTPKHYLLITAIDGGKPELTGTTQLKITVLDVNDNAP
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMS-IKPNGRHLFTLDQNNG
:... ::: :.::: . :::. .:::: ::::: ...::. . .. . : :: ::
CCDS54 AFERTIYKVRLLENAPNGTLVVTVNATDLDEGVNKDIAYSFNTDMSADILSKFHLDPVNG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 EVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVR
.. :.:..:.::.: :.:.:.:::::.:::. :::: .::.: ::: ::... ::::::
CCDS54 QISVKGNIDFEESKSYEIQVEATDKGNPPMSDHCTVLLEIVDINDNVPELVIQSLSLPVL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB3 EDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWA
::. :::::::::::::::::::::::::::::::::::::::::::::: ::::.: :
CCDS54 EDSPLSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSPLDRESVSA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB3 YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
::::::::::::::::::: :::::::::::::::.: ::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENNPPGCHIFTVSAR
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB3 DADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
::::::::::::::::::.:.:::::::::::::::::::::::::::::::::::::::
CCDS54 DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB3 GVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDAD
:::::.:::::::::::::::::::: ..:. ::::..:::::::::::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLMPRVGGIGGAVSELVPRSVGAGHVVAKVRAVDAD
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB3 SGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALT
:::::::::::::..::.:::::::::::::::::::::.:.:::::::::::::::.::
CCDS54 SGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDEVDAPRHRLLVLVKDHGEPSLT
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB3 ATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTA
::::::::::::::::::::.. :::..:::::::::::::.:::.::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSQASAGATGPEAALVDVNVYLIVAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB3 LWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLP-LG
: :: :::: :.::::::::: :::::::::::.::::: :: :::::::::::::
CCDS54 LRCSAPPTEGDCGPGKPTLVCSSAVGSWSYSQQRQQRVCSGEGLPKTDLMAFSPSLPPCP
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB3 LNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQW
.....: :.:. . ..:::::::::::::::::::::::::::::::::::::::::
CCDS54 ISRDRE-EKQDVDVDLSAKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQW
790 800 810 820 830
840 850 860 870 880 890
pF1KB3 PTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISI
840 850 860 870 880 890
900 910 920 930 940
pF1KB3 RQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940 950
949 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:53:27 2016 done: Thu Nov 3 12:53:28 2016
Total Scan time: 4.870 Total Display time: 0.440
Function used was FASTA [36.3.4 Apr, 2011]