(Circular) (Six-base) MAPSORT of: pFN21AB2497.seq Check: 1771 from: 1 to: 7114 pFN21AB2497 7114 bp With 182 enzymes: SgfI * October 20, 2009 10:33 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 2886 2985 3345 3627 2886 Size: 99 360 282 6373 Fragments arranged by size: 6373 360 282 99 AatII G_ACGT'C Cuts at: 278 331 414 600 1536 4924 278 Size: 53 83 186 936 3388 2468 Fragments arranged by size: 3388 2468 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 4457 1937 Size: 2520 4594 Acc65I G'GTAC_C Cuts at: 4435 4435 Size: 7114 AclI AA'CG_TT Cuts at: 1563 5241 5614 1563 Size: 3678 373 3063 Fragments arranged by size: 3678 3063 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2888 5177 6561 6829 1632 Size: 1256 2289 1384 268 1917 Fragments arranged by size: 2289 1917 1384 1256 268 AflII C'TTAA_G Cuts at: 820 1017 3418 820 Size: 197 2401 4516 Fragments arranged by size: 4516 2401 197 AflIII A'CryG_T Cuts at: 1203 6013 6990 1203 Size: 4810 977 1327 Fragments arranged by size: 4810 1327 977 AgeI A'CCGG_T Cuts at: 5945 5945 Size: 7114 AhdI GACnn_n'nnGTC Cuts at: 3991 5843 3991 Size: 1852 5262 AleI CACnn'nnGTG Cuts at: 1166 2667 3044 1166 Size: 1501 377 5236 Fragments arranged by size: 5236 1501 377 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 3966 1184 Size: 2782 4332 AlwNI CAG_nnn'CTG Cuts at: 2348 2530 3271 4857 6429 2348 Size: 182 741 1586 1572 3033 Fragments arranged by size: 3033 1586 1572 741 182 ApaI G_GGCC'C Cuts at: 2153 2169 2210 2378 2421 2759 2777 2153 Size: 16 41 168 43 338 18 6490 Fragments arranged by size: 6490 338 168 43 41 18 16 ApaLI G'TGCA_C Cuts at: 2873 5171 6327 2873 Size: 2298 1156 3660 Fragments arranged by size: 3660 2298 1156 ApoI r'AATT_y Cuts at: 1493 3330 3760 4423 4649 4801 6910 1493 Size: 1837 430 663 226 152 2109 1697 Fragments arranged by size: 2109 1837 1697 663 430 226 152 AseI AT'TA_AT Cuts at: 160 1032 5668 160 Size: 872 4636 1606 Fragments arranged by size: 4636 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 7114 AvaI C'yCGr_G Cuts at: 1870 1943 2168 2377 2618 2665 2825 4439 1870 Size: 73 225 209 241 47 160 1614 4545 Fragments arranged by size: 4545 1614 241 225 209 160 73 47 BamHI G'GATC_C Cuts at: 4444 4811 4444 Size: 367 6747 BanI G'GyrC_C Cuts at: 618 943 1160 1787 2227 2734 2973 3942 4435 Size: 325 217 627 440 507 239 969 493 Cuts at: 4435 5890 618 Size: 1455 1842 Fragments arranged by size: 1842 1455 969 627 507 493 440 325 239 217 BanII G_rGCy'C Cuts at: 1391 2153 2169 2210 2330 2378 2385 2421 2759 Size: 762 16 41 120 48 7 36 338 Cuts at: 2759 2777 2795 3929 4079 4433 1391 Size: 18 18 1134 150 354 4072 Fragments arranged by size: 4072 1134 762 354 338 150 120 48 41 36 18 18 16 7 BbeI G_GCGC'C Cuts at: 2231 2738 2231 Size: 507 6607 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 3215 3704 928 Size: 971 1316 489 4338 Fragments arranged by size: 4338 1316 971 489 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 3145 3179 5305 5339 1903 Size: 34 1208 34 2126 34 3678 Fragments arranged by size: 3678 2126 1208 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 2075 4024 5006 6216 2075 Size: 1949 982 1210 2973 Fragments arranged by size: 2973 1949 1210 982 BclI T'GATC_A Cuts at: 1548 1548 Size: 7114 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 2173 2195 5725 Size: 107 122 71 631 605 501 22 3530 Cuts at: 5725 136 Size: 1525 Fragments arranged by size: 3530 1525 631 605 501 122 107 71 22 BglII A'GATC_T Cuts at: 4378 7109 4378 Size: 2731 4383 BlpI GC'TnA_GC Cuts at: 2706 3744 4531 2706 Size: 1038 787 5289 Fragments arranged by size: 5289 1038 787 Bme1580I G_kGCm'C Cuts at: 1790 2153 2169 2210 2378 2421 2507 2759 2777 Size: 363 16 41 168 43 86 252 18 Cuts at: 2777 2825 2877 3464 3536 3945 5175 6331 1790 Size: 48 52 587 72 409 1230 1156 2573 Fragments arranged by size: 2573 1230 1156 587 409 363 252 168 86 72 52 48 43 41 18 16 BmgBI CAC'GTC Cuts at: 1318 2314 1318 Size: 996 6118 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 4321 4845 5803 Size: 416 53 83 399 24 2904 524 958 Cuts at: 5803 442 Size: 1753 Fragments arranged by size: 2904 1753 958 524 416 399 83 53 24 BmtI G_CTAG'C Cuts at: 1056 2705 1056 Size: 1649 5465 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 3948 3948 Size: 7114 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2369 4138 5774 1239 Size: 1130 1769 1636 2579 Fragments arranged by size: 2579 1769 1636 1130 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 2951 3041 4084 5239 6104 6402 2951 Size: 90 1043 1155 865 298 3663 Fragments arranged by size: 3663 1155 1043 865 298 90 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 2312 3352 4102 5777 882 Size: 617 813 1040 750 1675 2219 Fragments arranged by size: 2219 1675 1040 813 750 617 BsaAI yAC'GTr Cuts at: 493 1204 4905 493 Size: 711 3701 2702 Fragments arranged by size: 3701 2702 711 BsaBI GATnn'nnATC Cuts at: 7108 7108 Size: 7114 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 2228 2553 2735 4921 Size: 53 83 186 936 695 325 182 2186 Cuts at: 4921 5303 5938 275 Size: 382 635 1451 Fragments arranged by size: 2186 1451 936 695 635 382 325 186 182 83 53 BsaWI w'CCGG_w Cuts at: 2330 3447 5547 5945 6219 6366 6777 2330 Size: 1117 2100 398 274 147 411 2667 Fragments arranged by size: 2667 2100 1117 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 3590 3620 1178 Size: 30 165 30 2187 30 4672 Fragments arranged by size: 4672 2187 165 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 2198 2375 2384 2756 2759 3128 3649 4008 Size: 1012 177 9 372 3 369 521 359 Cuts at: 4008 1186 Size: 4292 Fragments arranged by size: 4292 1012 521 372 369 359 177 9 3 BseYI C'CCAG_C Cuts at: 2610 2642 2788 3773 4181 6317 6813 2610 Size: 32 146 985 408 2136 496 2911 Fragments arranged by size: 2911 2136 985 496 408 146 32 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 1163 Size: 573 6541 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 2083 2715 2763 4564 5325 6353 Size: 275 186 82 632 48 1801 761 1028 Cuts at: 6353 1540 Size: 2301 Fragments arranged by size: 2301 1801 1028 761 632 275 186 82 48 BsiHKAI G_wGCw'C Cuts at: 2877 3232 3929 4079 4229 5175 5260 6331 2877 Size: 355 697 150 150 946 85 1071 3660 Fragments arranged by size: 3660 1071 946 697 355 150 150 85 BsmI GAATG_Cn' Cuts at: 4625 4718 4625 Size: 93 7021 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2153 2169 2210 2330 2378 2385 2421 Size: 399 363 16 41 120 48 7 36 Cuts at: 2421 2507 2759 2777 2795 2825 2877 3232 3464 Size: 86 252 18 18 30 52 355 232 Cuts at: 3464 3536 3929 3945 4079 4229 4433 5175 5260 Size: 72 393 16 134 150 204 742 85 Cuts at: 5260 6331 1391 Size: 1071 2174 Fragments arranged by size: 2174 1071 742 399 393 363 355 252 232 204 150 134 120 86 85 72 52 48 41 36 30 18 18 16 16 7 BspEI T'CCGG_A Cuts at: 6777 6777 Size: 7114 BspHI T'CATG_A Cuts at: 5003 6733 5003 Size: 1730 5384 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2538 2886 2985 3345 3627 4469 844 Size: 1694 348 99 360 282 842 3489 Fragments arranged by size: 3489 1694 842 360 348 282 99 BsrBI CCG'CTC Cuts at: 1394 1823 2400 2603 5001 1394 Size: 429 577 203 2398 3507 Fragments arranged by size: 3507 2398 577 429 203 BsrDI GCAATG_nn' Cuts at: 65 1248 3866 5609 5783 65 Size: 1183 2618 1743 174 1396 Fragments arranged by size: 2618 1743 1396 1183 174 BsrFI r'CCGG_y Cuts at: 1700 1810 2107 2710 3350 5758 5945 1700 Size: 110 297 603 640 2408 187 2869 Fragments arranged by size: 2869 2408 640 603 297 187 110 BsrGI T'GTAC_A Cuts at: 96 3048 96 Size: 2952 4162 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 7114 BssSI C'ACGA_G Cuts at: 3490 5174 6186 3490 Size: 1684 1012 4418 Fragments arranged by size: 4418 1684 1012 BstAPI GCAn_nnn'nTGC Cuts at: 794 794 Size: 7114 BstBI TT'CG_AA Cuts at: 3165 5918 3165 Size: 2753 4361 BstEII G'GTnAC_C Cuts at: 1184 1184 Size: 7114 BstXI CCAn_nnnn'nTGG Cuts at: 2586 2586 Size: 7114 BstYI r'GATC_y Cuts at: 1972 3733 4124 4378 4444 4811 5196 5213 6665 Size: 1761 391 254 66 367 385 17 1452 Cuts at: 6665 6751 6763 7109 1972 Size: 86 12 346 1977 Fragments arranged by size: 1977 1761 1452 391 385 367 346 254 86 66 17 12 Bsu36I CC'TnA_GG Cuts at: 2739 4167 2739 Size: 1428 5686 BtgI C'CryG_G Cuts at: 513 1065 2004 2070 2322 2412 2448 2490 2779 Size: 552 939 66 252 90 36 42 289 Cuts at: 2779 4357 513 Size: 1578 3270 Fragments arranged by size: 3270 1578 939 552 289 252 90 66 42 36 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 6375 Fragments arranged by size: 6375 683 56 BtsI GCAGTG_nn' Cuts at: 2421 2840 3784 4630 5424 5444 2421 Size: 419 944 846 794 20 4091 Fragments arranged by size: 4091 944 846 794 419 20 ClaI AT'CG_AT Cuts at: 1554 1554 Size: 7114 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 7079 DraI TTT'AAA Cuts at: 4418 4418 Size: 7114 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 6121 809 Size: 507 4805 1802 Fragments arranged by size: 4805 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 2080 2113 2565 Size: 54 1425 50 275 18 250 33 452 Cuts at: 2565 2712 2760 4002 4056 4140 4561 5450 7079 Size: 147 48 1242 54 84 421 889 1629 Cuts at: 7079 8 Size: 43 Fragments arranged by size: 1629 1425 1242 889 452 421 275 250 147 84 54 54 50 48 43 33 18 EagI C'GGCC_G Cuts at: 1537 1812 2080 2712 2760 4561 1537 Size: 275 268 632 48 1801 4090 Fragments arranged by size: 4090 1801 632 275 268 48 EarI CTCTTCn'nnn_ Cuts at: 1353 3680 3839 5044 1353 Size: 2327 159 1205 3423 Fragments arranged by size: 3423 2327 1205 159 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 2464 2765 3512 5701 6075 6221 Size: 1064 138 875 301 747 2189 374 146 Cuts at: 6221 387 Size: 1280 Fragments arranged by size: 2189 1280 1064 875 747 374 301 146 138 EcoICRI GAG'CTC Cuts at: 3927 4077 3927 Size: 150 6964 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2369 2888 4138 5177 5774 6561 6829 Size: 393 737 519 1250 1039 597 787 268 Cuts at: 6829 1239 Size: 1524 Fragments arranged by size: 1524 1250 1039 787 737 597 519 393 268 EcoNI CCTnn'n_nnAGG Cuts at: 3468 3558 3468 Size: 90 7024 EcoO109I rG'GnC_Cy Cuts at: 2096 2119 2149 2150 2206 2207 2345 2374 2417 Size: 23 30 1 56 1 138 29 43 Cuts at: 2417 2432 2527 2755 2774 2910 2096 Size: 15 95 228 19 136 6300 Fragments arranged by size: 6300 228 138 136 95 56 43 30 29 23 19 15 1 1 EcoRI G'AATT_C Cuts at: 4423 4801 4423 Size: 378 6736 FspI TGC'GCA Cuts at: 5620 5620 Size: 7114 HaeII r_GCGC'y Cuts at: 1678 2231 2738 3147 6261 1678 Size: 553 507 409 3114 2531 Fragments arranged by size: 3114 2531 553 507 409 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 2224 2256 3812 3814 3844 Size: 32 135 32 652 32 1556 2 30 Cuts at: 3844 3846 3977 4009 4082 4114 5755 5787 5829 Size: 2 131 32 73 32 1641 32 42 Cuts at: 5829 5861 1373 Size: 32 2626 Fragments arranged by size: 2626 1641 1556 652 135 131 73 42 32 32 32 32 32 32 32 30 2 2 HincII GTy'rAC Cuts at: 669 1657 1938 4458 4704 669 Size: 988 281 2520 246 3079 Fragments arranged by size: 3079 2520 988 281 246 HindIII A'AGCT_T Cuts at: 748 748 Size: 7114 HpaI GTT'AAC Cuts at: 4704 4704 Size: 7114 KasI G'GCGC_C Cuts at: 2227 2734 2227 Size: 507 6607 KpnI G_GTAC'C Cuts at: 4439 4439 Size: 7114 MfeI C'AATT_G Cuts at: 4713 4713 Size: 7114 MluI A'CGCG_T Cuts at: 6990 6990 Size: 7114 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 6228 6412 1305 Size: 4923 184 2007 Fragments arranged by size: 4923 2007 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 2115 2567 4004 4142 10 Size: 54 1425 343 283 452 1437 138 2982 Fragments arranged by size: 2982 1437 1425 452 343 283 138 54 MslI CAynn'nnrTG Cuts at: 518 1166 2667 3044 3097 3404 3441 5072 5431 Size: 648 1501 377 53 307 37 1631 359 Cuts at: 5431 5590 518 Size: 159 2042 Fragments arranged by size: 2042 1631 1501 648 377 359 307 159 53 37 MspA1I CmG'CkG Cuts at: 1606 2072 2324 2414 2439 2450 2492 2781 2788 Size: 466 252 90 25 11 42 289 7 Cuts at: 2788 2866 4530 5207 6355 6600 1606 Size: 78 1664 677 1148 245 2120 Fragments arranged by size: 2120 1664 1148 677 466 289 252 245 90 78 42 25 11 7 NaeI GCC'GGC Cuts at: 2109 2712 2109 Size: 603 6511 NarI GG'CG_CC Cuts at: 2228 2735 2228 Size: 507 6607 NcoI C'CATG_G Cuts at: 513 1065 2004 4357 513 Size: 552 939 2353 3270 Fragments arranged by size: 3270 2353 939 552 NdeI CA'TA_TG Cuts at: 387 387 Size: 7114 NgoMIV G'CCGG_C Cuts at: 2107 2710 2107 Size: 603 6511 NheI G'CTAG_C Cuts at: 1052 2701 1052 Size: 1649 5465 NotI GC'GGCC_GC Cuts at: 4561 4561 Size: 7114 NspI r_CATG'y Cuts at: 1132 1229 2657 3409 4472 6017 1132 Size: 97 1428 752 1063 1545 2229 Fragments arranged by size: 2229 1545 1428 1063 752 97 PasI CC'CwG_GG Cuts at: 1348 2770 2926 1348 Size: 1422 156 5536 Fragments arranged by size: 5536 1422 156 PciI A'CATG_T Cuts at: 6013 6013 Size: 7114 PflMI CCAn_nnn'nTGG Cuts at: 1108 1108 Size: 7114 PmeI GTTT'AAAC Cuts at: 4418 4418 Size: 7114 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 5183 5215 6696 6728 5183 Size: 32 1481 32 5569 Fragments arranged by size: 5569 1481 32 32 PpuMI rG'GwC_Cy Cuts at: 2119 2527 2119 Size: 408 6706 PshAI GACnn'nnGTC Cuts at: 1613 1613 Size: 7114 PsiI TTA'TAA Cuts at: 4684 4684 Size: 7114 PspOMI G'GGCC_C Cuts at: 2149 2165 2206 2374 2417 2755 2773 2149 Size: 16 41 168 43 338 18 6490 Fragments arranged by size: 6490 338 168 43 41 18 16 PstI C_TGCA'G Cuts at: 830 2982 3299 3624 4466 830 Size: 2152 317 325 842 3478 Fragments arranged by size: 3478 2152 842 325 317 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 7114 PvuII CAG'CTG Cuts at: 2866 2866 Size: 7114 RsrII CG'GwC_CG Cuts at: 2783 2783 Size: 7114 SacI G_AGCT'C Cuts at: 3929 4079 3929 Size: 150 6964 SacII CC_GC'GG Cuts at: 2073 2325 2415 2451 2493 2782 2073 Size: 252 90 36 42 289 6405 Fragments arranged by size: 6405 289 252 90 42 36 SalI G'TCGA_C Cuts at: 1936 4456 1936 Size: 2520 4594 SbfI CC_TGCA'GG Cuts at: 3624 4466 3624 Size: 842 6272 ScaI AGT'ACT Cuts at: 3856 5362 7074 3856 Size: 1506 1712 3896 Fragments arranged by size: 3896 1712 1506 SfcI C'TryA_G Cuts at: 826 1045 2042 2978 3295 3620 4462 5597 6278 Size: 219 997 936 317 325 842 1135 681 Cuts at: 6278 6469 826 Size: 191 1471 Fragments arranged by size: 1471 1135 997 936 842 681 325 317 219 191 SfoI GGC'GCC Cuts at: 2229 2736 2229 Size: 507 6607 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 7114 SgrAI Cr'CCGG_yG Cuts at: 1700 3350 1700 Size: 1650 5464 SmaI CCC'GGG Cuts at: 1872 2170 2379 2620 2667 4441 1872 Size: 298 209 241 47 1774 4545 Fragments arranged by size: 4545 1774 298 241 209 47 SmlI C'TyrA_G Cuts at: 820 1017 1943 2966 3056 3418 4099 5218 6119 Size: 197 926 1023 90 362 681 1119 901 Cuts at: 6119 6381 820 Size: 262 1553 Fragments arranged by size: 1553 1119 1023 926 901 681 362 262 197 90 SnaBI TAC'GTA Cuts at: 493 4905 493 Size: 4412 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 7114 SphI G_CATG'C Cuts at: 1132 2657 4472 1132 Size: 1525 1815 3774 Fragments arranged by size: 3774 1815 1525 SrfI GCCC'GGGC Cuts at: 2170 2170 Size: 7114 SspI AAT'ATT Cuts at: 5 52 5038 5 Size: 47 4986 2081 Fragments arranged by size: 4986 2081 47 StuI AGG'CCT Cuts at: 1517 3178 1517 Size: 1661 5453 StyI C'CwwG_G Cuts at: 513 1065 2004 4357 4553 513 Size: 552 939 2353 196 3074 Fragments arranged by size: 3074 2353 939 552 196 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 2252 2294 2918 3787 4195 5141 5158 Size: 1255 672 42 624 869 408 946 17 Cuts at: 5158 5311 5496 5941 325 Size: 153 185 445 1498 Fragments arranged by size: 1498 1255 946 869 672 624 445 408 185 153 42 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 2814 3048 3854 Size: 274 80 33 51 1443 837 234 806 Cuts at: 3854 5360 7072 96 Size: 1506 1712 138 Fragments arranged by size: 1712 1506 1443 837 806 274 234 138 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 7074 7106 7074 Size: 32 7082 Tth111I GACn'n_nGTC Cuts at: 1316 1316 Size: 7114 XbaI T'CTAG_A Cuts at: 4450 4450 Size: 7114 XcmI CCAnnnn_n'nnnnTGG Cuts at: 2583 2583 Size: 7114 XhoI C'TCGA_G Cuts at: 1943 1943 Size: 7114 XmaI C'CCGG_G Cuts at: 1870 2168 2377 2618 2665 4439 1870 Size: 298 209 241 47 1774 4545 Fragments arranged by size: 4545 1774 298 241 209 47 XmnI GAAnn'nnTTC Cuts at: 3092 3485 5243 3092 Size: 393 1758 4963 Fragments arranged by size: 4963 1758 393 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 4922 276 Size: 53 83 186 936 3388 2468 Fragments arranged by size: 3388 2468 936 186 83 53 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI ClaI CspCI DraI DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NspI PasI PciI PflMI PmeI PpiI PpuMI PshAI PsiI PspOMI PstI PvuI PvuII RsrII SacI SacII SalI SbfI ScaI SfcI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SrfI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AfeI AloI AscI AvrII BaeI BbvCI BfrBI Bpu10I BsiWI BsmBI BstZ17I DraIII EcoRV FalI FseI FspAI NruI NsiI PacI PfoI PmlI PspXI PsrI SanDI SapI SexAI SfiI SwaI