Result of FASTA (omim) for
pFN21AA0714
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0714, 1766 aa
1>>>pF1KA0714 1766 - 1766 aa - 1766 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7697+/-0.000532; mu= 22.2080+/- 0.033
mean_var=84.3454+/-16.882, 0's: 0 Z-trim(107.5): 109 B-trim: 917 in 2/51
Lambda= 0.139651
statistics sampled from 15461 (15552) to 15461 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.522), E-opt: 0.2 (0.182), width: 16
Scan time: 16.240
The best scores are: opt bits E(85289)
NP_056380 (OMIM: 613083) E3 ubiquitin-protein liga (1812) 11602 2349.2 0
XP_016883805 (OMIM: 613083) PREDICTED: E3 ubiquiti (1477) 9688 1963.5 0
NP_001307695 (OMIM: 613083) E3 ubiquitin-protein l (1798) 6924 1406.7 0
XP_016883806 (OMIM: 613083) PREDICTED: E3 ubiquiti (1055) 6907 1403.1 0
XP_006724050 (OMIM: 613083) PREDICTED: E3 ubiquiti ( 925) 5636 1147.0 0
>>NP_056380 (OMIM: 613083) E3 ubiquitin-protein ligase l (1812 aa)
initn: 11602 init1: 11602 opt: 11602 Z-score: 12624.8 bits: 2349.2 E(85289): 0
Smith-Waterman score: 11602; 99.9% identity (99.9% similar) in 1766 aa overlap (1-1766:47-1812)
10 20 30
pF1KA0 MGGKNKQRTKGNLRPSNSGRAAELLAKEQG
::::::::::::::::::::::::::::::
NP_056 VSSSAARSRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLRPSNSGRAAELLAKEQG
20 30 40 50 60 70
40 50 60 70 80 90
pF1KA0 TVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSKKDVTTKLKAMQEFGTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSKKDVTTKLKAMQEFGTM
80 90 100 110 120 130
100 110 120 130 140 150
pF1KA0 CTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLILKVKKQLAPYLKSLMGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 CTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLILKVKKQLAPYLKSLMGY
140 150 160 170 180 190
160 170 180 190 200 210
pF1KA0 WLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVLQDHLIKETPDTLSDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 WLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVLQDHLIKETPDTLSDPQ
200 210 220 230 240 250
220 230 240 250 260 270
pF1KA0 TVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSLLSQNKFWKYGKHSVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSLLSQNKFWKYGKHSVPQ
260 270 280 290 300 310
280 290 300 310 320 330
pF1KA0 IRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEAVLYTLTTIEDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 IRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEAVLYTLTTIEDC
320 330 340 350 360 370
340 350 360 370 380 390
pF1KA0 WLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFLTSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 WLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFLTSLV
380 390 400 410 420 430
400 410 420 430 440 450
pF1KA0 AGLSTERTKTSSSESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDAVLKDPG
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDAVLKDPG
440 450 460 470 480 490
460 470 480 490 500 510
pF1KA0 LQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVE
500 510 520 530 540 550
520 530 540 550 560 570
pF1KA0 SVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKIEGWELTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKIEGWELTT
560 570 580 590 600 610
580 590 600 610 620 630
pF1KA0 EPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLSTLLDSFSSSRVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLSTLLDSFSSSRVF
620 630 640 650 660 670
640 650 660 670 680 690
pF1KA0 KMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFGFLVDILYSALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFGFLVDILYSALR
680 690 700 710 720 730
700 710 720 730 740 750
pF1KA0 CCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGDILGEKLVNLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 CCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGDILGEKLVNLAD
740 750 760 770 780 790
760 770 780 790 800 810
pF1KA0 CLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 CLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKL
800 810 820 830 840 850
820 830 840 850 860 870
pF1KA0 SEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICK
860 870 880 890 900 910
880 890 900 910 920 930
pF1KA0 LKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLNT
920 930 940 950 960 970
940 950 960 970 980 990
pF1KA0 LLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKTDFKEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKTDFKEQD
980 990 1000 1010 1020 1030
1000 1010 1020 1030 1040 1050
pF1KA0 IKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEELDNPPIFLIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 IKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEELDNPPIFLIGF
1040 1050 1060 1070 1080 1090
1060 1070 1080 1090 1100 1110
pF1KA0 CEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSRSISSDEVKPHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 CEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSRSISSDEVKPHY
1100 1110 1120 1130 1140 1150
1120 1130 1140 1150 1160 1170
pF1KA0 KRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLCSTNGGFGHLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLCSTNGGFGHLAI
1160 1170 1180 1190 1200 1210
1180 1190 1200 1210 1220 1230
pF1KA0 FNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLGVNIEIIRFLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLGVNIEIIRFLSL
1220 1230 1240 1250 1260 1270
1240 1250 1260 1270 1280 1290
pF1KA0 FLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCDLACDLSAFFDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCDLACDLSAFFDS
1280 1290 1300 1310 1320 1330
1300 1310 1320 1330 1340 1350
pF1KA0 TTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQNAMLKPMCETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQNAMLKPMCETL
1340 1350 1360 1370 1380 1390
1360 1370 1380 1390 1400 1410
pF1KA0 TYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQIAVYHMLYKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQIAVYHMLYKLMP
1400 1410 1420 1430 1440 1450
1420 1430 1440 1450 1460 1470
pF1KA0 ELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVGQIVTIKPLSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVGQIVTIKPLSED
1460 1470 1480 1490 1500 1510
1480 1490 1500 1510 1520 1530
pF1KA0 FCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETA
1520 1530 1540 1550 1560 1570
1540 1550 1560 1570 1580 1590
pF1KA0 VEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRV
1580 1590 1600 1610 1620 1630
1600 1610 1620 1630 1640 1650
pF1KA0 FNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATYTIEDIVIELII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATYTIEDIVIELII
1640 1650 1660 1670 1680 1690
1660 1670 1680 1690 1700 1710
pF1KA0 QLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFE
1700 1710 1720 1730 1740 1750
1720 1730 1740 1750 1760
pF1KA0 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
1760 1770 1780 1790 1800 1810
>>XP_016883805 (OMIM: 613083) PREDICTED: E3 ubiquitin-pr (1477 aa)
initn: 9688 init1: 9688 opt: 9688 Z-score: 10542.1 bits: 1963.5 E(85289): 0
Smith-Waterman score: 9688; 99.9% identity (99.9% similar) in 1477 aa overlap (290-1766:1-1477)
260 270 280 290 300 310
pF1KA0 FWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEA
::::::::::::::::::::::::::::::
XP_016 MKEEASKVSPSVLLSIDDSDPIVCPALWEA
10 20 30
320 330 340 350 360 370
pF1KA0 VLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKL
40 50 60 70 80 90
380 390 400 410 420 430
pF1KA0 DFFKNFLTSLVAGLSTERTKTSSSESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLI
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
XP_016 DFFKNFLTSLVAGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLI
100 110 120 130 140 150
440 450 460 470 480 490
pF1KA0 PFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICV
160 170 180 190 200 210
500 510 520 530 540 550
pF1KA0 AKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSE
220 230 240 250 260 270
560 570 580 590 600 610
pF1KA0 GEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLST
280 290 300 310 320 330
620 630 640 650 660 670
pF1KA0 LLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFG
340 350 360 370 380 390
680 690 700 710 720 730
pF1KA0 FLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGD
400 410 420 430 440 450
740 750 760 770 780 790
pF1KA0 ILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVR
460 470 480 490 500 510
800 810 820 830 840 850
pF1KA0 LHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKE
520 530 540 550 560 570
860 870 880 890 900 910
pF1KA0 KTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQV
580 590 600 610 620 630
920 930 940 950 960 970
pF1KA0 LLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNY
640 650 660 670 680 690
980 990 1000 1010 1020 1030
pF1KA0 ECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEE
700 710 720 730 740 750
1040 1050 1060 1070 1080 1090
pF1KA0 LDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSR
760 770 780 790 800 810
1100 1110 1120 1130 1140 1150
pF1KA0 SISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLC
820 830 840 850 860 870
1160 1170 1180 1190 1200 1210
pF1KA0 STNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLG
880 890 900 910 920 930
1220 1230 1240 1250 1260 1270
pF1KA0 VNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCD
940 950 960 970 980 990
1280 1290 1300 1310 1320 1330
pF1KA0 LACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQ
1000 1010 1020 1030 1040 1050
1340 1350 1360 1370 1380 1390
pF1KA0 NAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQI
1060 1070 1080 1090 1100 1110
1400 1410 1420 1430 1440 1450
pF1KA0 AVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVG
1120 1130 1140 1150 1160 1170
1460 1470 1480 1490 1500 1510
pF1KA0 QIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRL
1180 1190 1200 1210 1220 1230
1520 1530 1540 1550 1560 1570
pF1KA0 MPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMV
1240 1250 1260 1270 1280 1290
1580 1590 1600 1610 1620 1630
pF1KA0 RLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATY
1300 1310 1320 1330 1340 1350
1640 1650 1660 1670 1680 1690
pF1KA0 TIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLA
1360 1370 1380 1390 1400 1410
1700 1710 1720 1730 1740 1750
pF1KA0 LWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCP
1420 1430 1440 1450 1460 1470
1760
pF1KA0 LCRETFF
:::::::
XP_016 LCRETFF
>>NP_001307695 (OMIM: 613083) E3 ubiquitin-protein ligas (1798 aa)
initn: 6914 init1: 6914 opt: 6924 Z-score: 7531.2 bits: 1406.7 E(85289): 0
Smith-Waterman score: 11475; 99.2% identity (99.2% similar) in 1766 aa overlap (1-1766:47-1798)
10 20 30
pF1KA0 MGGKNKQRTKGNLRPSNSGRAAELLAKEQG
::::::::::::::::::::::::::::::
NP_001 VSSSAARSRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLRPSNSGRAAELLAKEQG
20 30 40 50 60 70
40 50 60 70 80 90
pF1KA0 TVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSKKDVTTKLKAMQEFGTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSKKDVTTKLKAMQEFGTM
80 90 100 110 120 130
100 110 120 130 140 150
pF1KA0 CTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLILKVKKQLAPYLKSLMGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLILKVKKQLAPYLKSLMGY
140 150 160 170 180 190
160 170 180 190 200 210
pF1KA0 WLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVLQDHLIKETPDTLSDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVLQDHLIKETPDTLSDPQ
200 210 220 230 240 250
220 230 240 250 260 270
pF1KA0 TVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSLLSQNKFWKYGKHSVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSLLSQNKFWKYGKHSVPQ
260 270 280 290 300 310
280 290 300 310 320 330
pF1KA0 IRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEAVLYTLTTIEDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEAVLYTLTTIEDC
320 330 340 350 360 370
340 350 360 370 380 390
pF1KA0 WLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFLTSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFLTSLV
380 390 400 410 420 430
400 410 420 430 440 450
pF1KA0 AGLSTERTKTSSSESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDAVLKDPG
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDAVLKDPG
440 450 460 470 480 490
460 470 480 490 500 510
pF1KA0 LQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVE
500 510 520 530 540 550
520 530 540 550 560 570
pF1KA0 SVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKIEGWELTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKIEGWELTT
560 570 580 590 600 610
580 590 600 610 620 630
pF1KA0 EPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLSTLLDSFSSSRVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLSTLLDSFSSSRVF
620 630 640 650 660 670
640 650 660 670 680 690
pF1KA0 KMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFGFLVDILYSALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFGFLVDILYSALR
680 690 700 710 720 730
700 710 720 730 740 750
pF1KA0 CCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGDILGEKLVNLAD
::::::::::::::::: :::::::::::::::::::::::::::::
NP_001 CCDNDMERKKVLDDLTK--------------ACPSSDKHALVTPWLKGDILGEKLVNLAD
740 750 760 770 780
760 770 780 790 800 810
pF1KA0 CLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKL
790 800 810 820 830 840
820 830 840 850 860 870
pF1KA0 SEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICK
850 860 870 880 890 900
880 890 900 910 920 930
pF1KA0 LKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLNT
910 920 930 940 950 960
940 950 960 970 980 990
pF1KA0 LLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKTDFKEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKTDFKEQD
970 980 990 1000 1010 1020
1000 1010 1020 1030 1040 1050
pF1KA0 IKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEELDNPPIFLIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEELDNPPIFLIGF
1030 1040 1050 1060 1070 1080
1060 1070 1080 1090 1100 1110
pF1KA0 CEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSRSISSDEVKPHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSRSISSDEVKPHY
1090 1100 1110 1120 1130 1140
1120 1130 1140 1150 1160 1170
pF1KA0 KRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLCSTNGGFGHLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLCSTNGGFGHLAI
1150 1160 1170 1180 1190 1200
1180 1190 1200 1210 1220 1230
pF1KA0 FNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLGVNIEIIRFLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLGVNIEIIRFLSL
1210 1220 1230 1240 1250 1260
1240 1250 1260 1270 1280 1290
pF1KA0 FLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCDLACDLSAFFDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCDLACDLSAFFDS
1270 1280 1290 1300 1310 1320
1300 1310 1320 1330 1340 1350
pF1KA0 TTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQNAMLKPMCETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQNAMLKPMCETL
1330 1340 1350 1360 1370 1380
1360 1370 1380 1390 1400 1410
pF1KA0 TYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQIAVYHMLYKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQIAVYHMLYKLMP
1390 1400 1410 1420 1430 1440
1420 1430 1440 1450 1460 1470
pF1KA0 ELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVGQIVTIKPLSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVGQIVTIKPLSED
1450 1460 1470 1480 1490 1500
1480 1490 1500 1510 1520 1530
pF1KA0 FCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETA
1510 1520 1530 1540 1550 1560
1540 1550 1560 1570 1580 1590
pF1KA0 VEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRV
1570 1580 1590 1600 1610 1620
1600 1610 1620 1630 1640 1650
pF1KA0 FNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATYTIEDIVIELII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATYTIEDIVIELII
1630 1640 1650 1660 1670 1680
1660 1670 1680 1690 1700 1710
pF1KA0 QLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFE
1690 1700 1710 1720 1730 1740
1720 1730 1740 1750 1760
pF1KA0 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
1750 1760 1770 1780 1790
>>XP_016883806 (OMIM: 613083) PREDICTED: E3 ubiquitin-pr (1055 aa)
initn: 6907 init1: 6907 opt: 6907 Z-score: 7516.1 bits: 1403.1 E(85289): 0
Smith-Waterman score: 6907; 100.0% identity (100.0% similar) in 1045 aa overlap (722-1766:11-1055)
700 710 720 730 740 750
pF1KA0 CDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGDILGEKLVNLADC
::::::::::::::::::::::::::::::
XP_016 MFILAYLRDIACPSSDKHALVTPWLKGDILGEKLVNLADC
10 20 30 40
760 770 780 790 800 810
pF1KA0 LCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKLS
50 60 70 80 90 100
820 830 840 850 860 870
pF1KA0 EAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICKL
110 120 130 140 150 160
880 890 900 910 920 930
pF1KA0 KNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLNTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLNTL
170 180 190 200 210 220
940 950 960 970 980 990
pF1KA0 LESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKTDFKEQDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKTDFKEQDI
230 240 250 260 270 280
1000 1010 1020 1030 1040 1050
pF1KA0 KTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEELDNPPIFLIGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQWCEELDNPPIFLIGFC
290 300 310 320 330 340
1060 1070 1080 1090 1100 1110
pF1KA0 EILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSRSISSDEVKPHYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAKLILSRSISSDEVKPHYK
350 360 370 380 390 400
1120 1130 1140 1150 1160 1170
pF1KA0 RKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLCSTNGGFGHLAIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWTKKDLCSTNGGFGHLAIF
410 420 430 440 450 460
1180 1190 1200 1210 1220 1230
pF1KA0 NSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLGVNIEIIRFLSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEASPEVLGVNIEIIRFLSLF
470 480 490 500 510 520
1240 1250 1260 1270 1280 1290
pF1KA0 LKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCDLACDLSAFFDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFACVSCDLACDLSAFFDST
530 540 550 560 570 580
1300 1310 1320 1330 1340 1350
pF1KA0 TLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQNAMLKPMCETLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVSETSFQNAMLKPMCETLT
590 600 610 620 630 640
1360 1370 1380 1390 1400 1410
pF1KA0 YISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQIAVYHMLYKLMPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRARPVQIAVYHMLYKLMPE
650 660 670 680 690 700
1420 1430 1440 1450 1460 1470
pF1KA0 LPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVGQIVTIKPLSEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLGCIPVGQIVTIKPLSEDF
710 720 730 740 750 760
1480 1490 1500 1510 1520 1530
pF1KA0 CYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETAV
770 780 790 800 810 820
1540 1550 1560 1570 1580 1590
pF1KA0 EVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRVF
830 840 850 860 870 880
1600 1610 1620 1630 1640 1650
pF1KA0 NIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATYTIEDIVIELIIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTREVMATYTIEDIVIELIIQ
890 900 910 920 930 940
1660 1670 1680 1690 1700 1710
pF1KA0 LPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEG
950 960 970 980 990 1000
1720 1730 1740 1750 1760
pF1KA0 VEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
1010 1020 1030 1040 1050
>>XP_006724050 (OMIM: 613083) PREDICTED: E3 ubiquitin-pr (925 aa)
initn: 5634 init1: 5634 opt: 5636 Z-score: 6133.0 bits: 1147.0 E(85289): 0
Smith-Waterman score: 5636; 98.6% identity (98.9% similar) in 879 aa overlap (1-876:47-925)
10 20 30
pF1KA0 MGGKNKQRTKGNLRPSNSGRAAELLAKEQG
::::::::::::::::::::::::::::::
XP_006 VSSSAARSRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLRPSNSGRAAELLAKEQG
20 30 40 50 60 70
40 50 60 70 80 90
pF1KA0 TVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSKKDVTTKLKAMQEFGTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSKKDVTTKLKAMQEFGTM
80 90 100 110 120 130
100 110 120 130 140 150
pF1KA0 CTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLILKVKKQLAPYLKSLMGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLILKVKKQLAPYLKSLMGY
140 150 160 170 180 190
160 170 180 190 200 210
pF1KA0 WLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVLQDHLIKETPDTLSDPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVLQDHLIKETPDTLSDPQ
200 210 220 230 240 250
220 230 240 250 260 270
pF1KA0 TVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSLLSQNKFWKYGKHSVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSLLSQNKFWKYGKHSVPQ
260 270 280 290 300 310
280 290 300 310 320 330
pF1KA0 IRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEAVLYTLTTIEDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCPALWEAVLYTLTTIEDC
320 330 340 350 360 370
340 350 360 370 380 390
pF1KA0 WLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFLTSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFLTSLV
380 390 400 410 420 430
400 410 420 430 440 450
pF1KA0 AGLSTERTKTSSSESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDAVLKDPG
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDAVLKDPG
440 450 460 470 480 490
460 470 480 490 500 510
pF1KA0 LQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVE
500 510 520 530 540 550
520 530 540 550 560 570
pF1KA0 SVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKIEGWELTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKIEGWELTT
560 570 580 590 600 610
580 590 600 610 620 630
pF1KA0 EPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLSTLLDSFSSSRVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHLRFLSTLLDSFSSSRVF
620 630 640 650 660 670
640 650 660 670 680 690
pF1KA0 KMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFGFLVDILYSALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQRKDFGFLVDILYSALR
680 690 700 710 720 730
700 710 720 730 740 750
pF1KA0 CCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGDILGEKLVNLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTPWLKGDILGEKLVNLAD
740 750 760 770 780 790
760 770 780 790 800 810
pF1KA0 CLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVERIIVRLHETLFKTKKL
800 810 820 830 840 850
820 830 840 850 860
pF1KA0 SEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPD---FL
:::::::::::::::::::::::::::::::::::::::::::::::::::::: .:
XP_006 SEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLCAQSKEKTHLPGNSLLL
860 870 880 890 900 910
870 880 890 900 910 920
pF1KA0 ICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDL
: . : :
XP_006 KCFVGNLRL
920
1766 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:04:44 2016 done: Thu Nov 3 10:04:46 2016
Total Scan time: 16.240 Total Display time: 0.430
Function used was FASTA [36.3.4 Apr, 2011]